© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2596 |
| Gene name | |
| Location | Contig_1626:1040..1957 |
| Strand | - |
| Gene length (bp) | 917 |
| Transcript length (bp) | 639 |
| Coding sequence length (bp) | 639 |
| Protein length (aa) | 213 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04191 | PEMT | Phospholipid methyltransferase | 2.6E-31 | 98 | 198 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P05375|PEM2_YEAST | Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 | 9 | 202 | 6.0E-67 |
| sp|O74827|CHO1_SCHPO | Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 | 18 | 203 | 1.0E-61 |
| sp|Q61907|PEMT_MOUSE | Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 | 13 | 207 | 2.0E-49 |
| sp|Q7YRH6|PEMT_BOVIN | Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 | 13 | 201 | 9.0E-49 |
| sp|Q54SD5|PEM2_DICDI | Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 | 10 | 196 | 6.0E-48 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P05375|PEM2_YEAST | Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OPI3 PE=1 SV=1 | 9 | 202 | 6.0E-67 |
| sp|O74827|CHO1_SCHPO | Phosphatidyl-N-methylethanolamine N-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cho1 PE=3 SV=1 | 18 | 203 | 1.0E-61 |
| sp|Q61907|PEMT_MOUSE | Phosphatidylethanolamine N-methyltransferase OS=Mus musculus GN=Pemt PE=1 SV=4 | 13 | 207 | 2.0E-49 |
| sp|Q7YRH6|PEMT_BOVIN | Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1 | 13 | 201 | 9.0E-49 |
| sp|Q54SD5|PEM2_DICDI | Putative phosphatidylethanolamine N-methyltransferase OS=Dictyostelium discoideum GN=pem2 PE=3 SV=1 | 10 | 196 | 6.0E-48 |
| sp|Q9UBM1|PEMT_HUMAN | Phosphatidylethanolamine N-methyltransferase OS=Homo sapiens GN=PEMT PE=1 SV=4 | 13 | 198 | 5.0E-41 |
| sp|Q08388|PEMT_RAT | Phosphatidylethanolamine N-methyltransferase OS=Rattus norvegicus GN=Pemt PE=1 SV=2 | 13 | 207 | 5.0E-39 |
| sp|Q54H80|PEMTL_DICDI | PEMT/PEM2 methyltransferase family protein OS=Dictyostelium discoideum GN=DDB_G0289645 PE=3 SV=1 | 19 | 212 | 2.0E-17 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| 2 | 59 | 78 | 19 |
| 3 | 98 | 120 | 22 |
| 4 | 140 | 162 | 22 |
| 5 | 167 | 184 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2596 MASPAAAGDLARYVDFDKQSLLVSACAIGFNPLFWNIVARQEYHNKLLTRLFGGRSRTACYALAVTIFSLGIVRD LLYKRAIQEQPSHALLQTAYARAAAWALLAGGNTLVVSSTWALGITGTFLGDYFGILMDRMVTGFPFNVCGAPMY WGSTMSFLGTALLFGKPAGLLLTGWVLVVYVLALRYEDPFTAGIYAKRDRERAAARSGKKLE* |
| Coding | >Hirsu2|2596 ATGGCCTCCCCCGCCGCCGCCGGCGACCTCGCCCGCTACGTCGACTTCGACAAGCAGAGCCTGCTGGTGTCCGCG TGCGCCATCGGCTTCAACCCGCTGTTCTGGAACATCGTTGCGCGCCAAGAGTACCATAACAAGCTGCTGACGAGG CTCTTCGGCGGGCGGTCCCGCACGGCCTGCTACGCCCTGGCCGTCACCATCTTCTCGCTCGGCATCGTGCGCGAC CTGCTGTACAAGCGGGCGATCCAGGAGCAGCCGTCGCACGCGCTGCTGCAGACGGCCTACGCGCGGGCGGCCGCG TGGGCGCTGCTGGCCGGCGGCAACACCCTGGTCGTCAGCTCGACCTGGGCGCTCGGCATCACCGGCACCTTCCTG GGCGACTACTTCGGCATCCTCATGGACCGCATGGTCACCGGCTTCCCCTTCAACGTCTGCGGCGCCCCCATGTAC TGGGGCTCGACCATGAGCTTCCTTGGCACTGCCCTGCTCTTCGGCAAGCCCGCCGGCCTGCTGCTGACCGGCTGG GTCCTGGTCGTCTACGTCCTGGCCCTGCGCTACGAGGACCCCTTCACGGCCGGCATCTACGCCAAGCGCGACCGC GAGAGGGCCGCCGCCCGCTCCGGCAAGAAGCTGGAGTAG |
| Transcript | >Hirsu2|2596 ATGGCCTCCCCCGCCGCCGCCGGCGACCTCGCCCGCTACGTCGACTTCGACAAGCAGAGCCTGCTGGTGTCCGCG TGCGCCATCGGCTTCAACCCGCTGTTCTGGAACATCGTTGCGCGCCAAGAGTACCATAACAAGCTGCTGACGAGG CTCTTCGGCGGGCGGTCCCGCACGGCCTGCTACGCCCTGGCCGTCACCATCTTCTCGCTCGGCATCGTGCGCGAC CTGCTGTACAAGCGGGCGATCCAGGAGCAGCCGTCGCACGCGCTGCTGCAGACGGCCTACGCGCGGGCGGCCGCG TGGGCGCTGCTGGCCGGCGGCAACACCCTGGTCGTCAGCTCGACCTGGGCGCTCGGCATCACCGGCACCTTCCTG GGCGACTACTTCGGCATCCTCATGGACCGCATGGTCACCGGCTTCCCCTTCAACGTCTGCGGCGCCCCCATGTAC TGGGGCTCGACCATGAGCTTCCTTGGCACTGCCCTGCTCTTCGGCAAGCCCGCCGGCCTGCTGCTGACCGGCTGG GTCCTGGTCGTCTACGTCCTGGCCCTGCGCTACGAGGACCCCTTCACGGCCGGCATCTACGCCAAGCGCGACCGC GAGAGGGCCGCCGCCCGCTCCGGCAAGAAGCTGGAGTAG |
| Gene | >Hirsu2|2596 ATGGCCTCCCCCGCCGCCGCCGGCGACCTCGCCCGCTACGTCGACTTCGACAAGCAGAGCCTGCTGGGTGCGTCC AGGCCGGCCGTGACGTCGCGCGATGGCGGGATGCTCTCTGTCTGACAAGCCTGGCCCGACGTGTACAGTGTCCGC GTGCGCCATCGGCTTCAACCCGCTGTTCTGGAAGTATGTTCTCGTCCTCGGCCCCCTAGATGAGAGAGTGGGAGG TGGGAGAGATGCAGGGCACCCGCTGAATGCGCACGCAAAAACGCCGGTCCGAATAGCATCGTTGCGCGCCAAGGT TCGAGCCTCTTTCCCTTCGCCCTTCCCTCACGGCCAAAACGGTCGCCGAGGGGGGGGAGGCCGGATCGCAGGCAC GGGGACTGACGGGGATGCGGCGCGCAGAGTACCATAACAAGCTGCTGACGAGGCTCTTCGGCGGGCGGTCCCGCA CGGCCTGCTACGCCCTGGCCGTCACCATCTTCTCGCTCGGCATCGTGCGCGACCTGCTGTACAAGCGGGCGATCC AGGAGCAGCCGTCGCACGCGCTGCTGCAGACGGCCTACGCGCGGGCGGCCGCGTGGGCGCTGCTGGCCGGCGGCA ACACCCTGGTCGTCAGCTCGACCTGGGCGCTCGGCATCACCGGCACCTTCCTGGGCGACTACTTCGGCATCCTCA TGGACCGCATGGTCACCGGCTTCCCCTTCAACGTCTGCGGCGCCCCCATGTACTGGGGCTCGACCATGAGCTTCC TTGGCACTGCCCTGCTCTTCGGCAAGCCCGCCGGCCTGCTGCTGACCGGCTGGGTCCTGGTCGTCTACGTCCTGG CCCTGCGCTACGAGGACCCCTTCACGGCCGGCATCTACGCCAAGCGCGACCGCGAGAGGGCCGCCGCCCGCTCCG GCAAGAAGCTGGAGTAG |