Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2584
Gene name
LocationContig_162:27729..28981
Strand+
Gene length (bp)1252
Transcript length (bp)930
Coding sequence length (bp)930
Protein length (aa) 310

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 134 156 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2584
MAVHPTDAAVEGMGVHGLRFLNDEWNDSISNGAAFTVRWNQSLAKAGSGLGVFKVTYPKDGVVVYELVSNLTDAI
DGDGESCKWTPQNLDKKDLYAMWLTSGTSGEDTQSNWTLSPPWIPKEPTGQSSNTWAAPFIIPVVCLLGLYAACL
TGYLVYRRRKKARREKEDATPHQDVSRNNSVASAATSPTIVAADDATGKRGRTAAPSIHSGTDVTVVSGAAGGVP
DDFFDVERSPVDGHSDRPDRSNRRGIRLVNSSASGSEVTLHSAREADVADADKDVEKGEKSVPNSPNGRNFSRPV
QKSAGRGIA*
Coding >Hirsu2|2584
ATGGCGGTTCATCCGACCGACGCCGCGGTAGAGGGCATGGGCGTCCATGGCCTCCGCTTCCTCAACGACGAGTGG
AACGACAGCATCTCCAACGGCGCCGCCTTCACCGTCCGCTGGAACCAGTCCCTGGCCAAGGCCGGCTCCGGCCTG
GGCGTCTTCAAAGTCACGTATCCCAAGGACGGCGTCGTCGTCTACGAGCTCGTATCCAACCTGACCGATGCCATC
GACGGCGACGGCGAGTCGTGTAAATGGACGCCGCAGAACTTGGACAAGAAGGACCTCTATGCCATGTGGCTCACC
TCCGGCACCTCGGGAGAGGACACTCAGTCCAACTGGACGCTATCACCTCCCTGGATCCCCAAGGAACCGACAGGT
CAAAGCAGCAACACCTGGGCGGCACCGTTCATCATTCCAGTCGTCTGCCTGCTCGGCCTCTACGCCGCATGCCTG
ACAGGCTACCTGGTGTATCGACGGAGGAAAAAGGCGAGGCGCGAGAAGGAGGACGCCACCCCCCATCAGGACGTC
AGTCGCAACAACTCGGTCGCCTCGGCCGCCACGTCGCCCACCATCGTCGCCGCCGATGACGCTACCGGCAAGCGC
GGCCGCACCGCCGCCCCCAGCATCCACTCGGGGACGGACGTCACCGTCGTCAGTGGCGCCGCCGGCGGCGTCCCT
GACGACTTCTTCGACGTCGAGCGCTCCCCCGTGGACGGGCATAGCGATCGTCCCGACAGATCCAACAGGCGCGGC
ATCCGCCTCGTCAACAGCTCCGCCTCGGGGTCCGAGGTGACTCTCCACAGCGCCCGAGAGGCGGACGTCGCCGAC
GCCGACAAGGACGTCGAGAAGGGCGAAAAGAGCGTACCCAACTCCCCCAACGGCCGGAACTTCTCCCGGCCTGTA
CAAAAGTCGGCAGGCAGAGGCATTGCATAG
Transcript >Hirsu2|2584
ATGGCGGTTCATCCGACCGACGCCGCGGTAGAGGGCATGGGCGTCCATGGCCTCCGCTTCCTCAACGACGAGTGG
AACGACAGCATCTCCAACGGCGCCGCCTTCACCGTCCGCTGGAACCAGTCCCTGGCCAAGGCCGGCTCCGGCCTG
GGCGTCTTCAAAGTCACGTATCCCAAGGACGGCGTCGTCGTCTACGAGCTCGTATCCAACCTGACCGATGCCATC
GACGGCGACGGCGAGTCGTGTAAATGGACGCCGCAGAACTTGGACAAGAAGGACCTCTATGCCATGTGGCTCACC
TCCGGCACCTCGGGAGAGGACACTCAGTCCAACTGGACGCTATCACCTCCCTGGATCCCCAAGGAACCGACAGGT
CAAAGCAGCAACACCTGGGCGGCACCGTTCATCATTCCAGTCGTCTGCCTGCTCGGCCTCTACGCCGCATGCCTG
ACAGGCTACCTGGTGTATCGACGGAGGAAAAAGGCGAGGCGCGAGAAGGAGGACGCCACCCCCCATCAGGACGTC
AGTCGCAACAACTCGGTCGCCTCGGCCGCCACGTCGCCCACCATCGTCGCCGCCGATGACGCTACCGGCAAGCGC
GGCCGCACCGCCGCCCCCAGCATCCACTCGGGGACGGACGTCACCGTCGTCAGTGGCGCCGCCGGCGGCGTCCCT
GACGACTTCTTCGACGTCGAGCGCTCCCCCGTGGACGGGCATAGCGATCGTCCCGACAGATCCAACAGGCGCGGC
ATCCGCCTCGTCAACAGCTCCGCCTCGGGGTCCGAGGTGACTCTCCACAGCGCCCGAGAGGCGGACGTCGCCGAC
GCCGACAAGGACGTCGAGAAGGGCGAAAAGAGCGTACCCAACTCCCCCAACGGCCGGAACTTCTCCCGGCCTGTA
CAAAAGTCGGCAGGCAGAGGCATTGCATAG
Gene >Hirsu2|2584
ATGGCGGTTCATCCGACCGACGCCGCGGTAGAGGGCATGGGCGTCCATGGCCTCCGCTTCCTCAACGACGAGTGG
AACGACAGCATCTCCAACGGCGCCGCCTTCACCGTCCGCTGGAACCAGTCCCTGGCCAAGGCCGGCTCCGGCCTG
GGCGTCTTCAAAGTCACGTATCCCAAGGACGGCGTCGTCGTCTACGAGCTCGTATCCAACCTGACCGGTGTGTAG
CCCGCCGTGCCGTGTCAAGACGCCTTCGGCTCACTGACCGAGTGCTGGGATAGATGCCATCGACGGCGACGGCGA
GTCGTGTAAATGGACGCCGCAGAACTTGGACAAGAAGGACCTCTATGCCATGTGGCTCACCTCCGGCACCTCGGG
AGAGGACACTCAGTCCAACTGGACGCTATCACCTCCCTGGATCCCCAAGGAACCGGTTTGTCGTCCCTTCTTTTT
CGTCCTTTTTTTTATTACTCTGCCTTTTTTTTTCATTTTTCTATCTCTTTCTCTTTCTCTCCTCCGTCTTCTCTT
CGGGGCGGGGGCACTCTTTCTTCGTGTCCTCTTCGGCTCCCTTCGTCGGCTGTGTTCCTCGGCGGCGACATTCCC
CCGCTGCCTCTTCCACCTGGCCTCAAAAGGACACCTCATCCCCCTCCCCCCTCAGTCACATTCCTGGCTCTAACG
CGGCGTGACACTCAAGACAGGTCAAAGCAGCAACACCTGGGCGGCACCGTTCATCATTCCAGTCGTCTGCCTGCT
CGGCCTCTACGCCGCATGCCTGACAGGCTACCTGGTGTATCGACGGAGGAAAAAGGCGAGGCGCGAGAAGGAGGA
CGCCACCCCCCATCAGGACGTCAGTCGCAACAACTCGGTCGCCTCGGCCGCCACGTCGCCCACCATCGTCGCCGC
CGATGACGCTACCGGCAAGCGCGGCCGCACCGCCGCCCCCAGCATCCACTCGGGGACGGACGTCACCGTCGTCAG
TGGCGCCGCCGGCGGCGTCCCTGACGACTTCTTCGACGTCGAGCGCTCCCCCGTGGACGGGCATAGCGATCGTCC
CGACAGATCCAACAGGCGCGGCATCCGCCTCGTCAACAGCTCCGCCTCGGGGTCCGAGGTGACTCTCCACAGCGC
CCGAGAGGCGGACGTCGCCGACGCCGACAAGGACGTCGAGAAGGGCGAAAAGAGCGTACCCAACTCCCCCAACGG
CCGGAACTTCTCCCGGCCTGTACAAAAGTCGGCAGGCAGAGGCATTGCATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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