Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2578
Gene name
LocationContig_162:15132..15804
Strand+
Gene length (bp)672
Transcript length (bp)612
Coding sequence length (bp)612
Protein length (aa) 204

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07426 Dynactin_p22 Dynactin subunit p22 1.5E-08 13 177

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2578
MENALDQTTLATVSLLESRLLRLEHILHGPSASPAAAQHGSVVRRLGDLERRFALILSRVRVYGDLLKIYKSHPD
LFHAPAPSEPPSQLSTEVIRSIVLASASSYPATLSSLTAIKDCPIPDTSESTGLISAADRMKALHATQLAQAAEM
AELRRRSEILVRSWYQYRLLASSQFIADAQGRMEEVERRVRRRERAKEEEEEF*
Coding >Hirsu2|2578
ATGGAGAACGCCCTCGACCAGACGACGCTCGCCACCGTCTCCCTCCTCGAATCCCGCCTTCTGCGTCTCGAGCAC
ATCCTTCACGGCCCGTCAGCCTCGCCCGCCGCCGCGCAGCATGGATCCGTCGTCCGCAGGCTGGGCGATTTGGAA
AGACGGTTCGCGCTCATACTGTCGCGCGTCCGCGTCTATGGCGATCTGCTCAAGATTTACAAATCGCACCCGGAC
CTCTTCCACGCCCCCGCCCCTTCCGAGCCACCGTCGCAGCTCTCGACCGAGGTCATACGGTCCATCGTCCTCGCC
TCGGCCTCTTCCTACCCCGCCACCTTGTCCTCTCTGACGGCCATCAAGGACTGCCCCATCCCCGACACGTCTGAG
AGCACTGGCCTGATATCGGCGGCGGACCGCATGAAGGCCCTGCACGCGACGCAGCTGGCTCAGGCCGCAGAGATG
GCCGAGCTGCGCCGCCGAAGCGAGATCTTGGTCCGCTCGTGGTACCAGTACCGTCTCCTTGCCAGCTCGCAGTTC
ATTGCCGACGCCCAAGGCCGTATGGAAGAAGTCGAGCGACGAGTGAGACGAAGGGAACGGGCCAAGGAGGAAGAA
GAGGAATTTTGA
Transcript >Hirsu2|2578
ATGGAGAACGCCCTCGACCAGACGACGCTCGCCACCGTCTCCCTCCTCGAATCCCGCCTTCTGCGTCTCGAGCAC
ATCCTTCACGGCCCGTCAGCCTCGCCCGCCGCCGCGCAGCATGGATCCGTCGTCCGCAGGCTGGGCGATTTGGAA
AGACGGTTCGCGCTCATACTGTCGCGCGTCCGCGTCTATGGCGATCTGCTCAAGATTTACAAATCGCACCCGGAC
CTCTTCCACGCCCCCGCCCCTTCCGAGCCACCGTCGCAGCTCTCGACCGAGGTCATACGGTCCATCGTCCTCGCC
TCGGCCTCTTCCTACCCCGCCACCTTGTCCTCTCTGACGGCCATCAAGGACTGCCCCATCCCCGACACGTCTGAG
AGCACTGGCCTGATATCGGCGGCGGACCGCATGAAGGCCCTGCACGCGACGCAGCTGGCTCAGGCCGCAGAGATG
GCCGAGCTGCGCCGCCGAAGCGAGATCTTGGTCCGCTCGTGGTACCAGTACCGTCTCCTTGCCAGCTCGCAGTTC
ATTGCCGACGCCCAAGGCCGTATGGAAGAAGTCGAGCGACGAGTGAGACGAAGGGAACGGGCCAAGGAGGAAGAA
GAGGAATTTTGA
Gene >Hirsu2|2578
ATGGAGAACGCCCTCGACCAGACGACGCTCGCCACCGTCTCCCTCCTCGAATCCCGCCTTCTGCGTCTCGAGCAC
ATCCTTCACGGCCCGTCAGCCTCGCCCGCCGCCGCGCAGCATGGATCCGTCGTCCGCAGGCTGGGCGATTTGGAA
AGACGGTTCGCGCTCATACTGTCGCGCGTCCGCGTCTATGGCGATCTGCTCAAGATTTGTACGCGCCGTCTCCCC
TTCTACGCACCCGGCCTTTATCCTCTAATCGCGTCCTGGACAGACAAATCGCACCCGGACCTCTTCCACGCCCCC
GCCCCTTCCGAGCCACCGTCGCAGCTCTCGACCGAGGTCATACGGTCCATCGTCCTCGCCTCGGCCTCTTCCTAC
CCCGCCACCTTGTCCTCTCTGACGGCCATCAAGGACTGCCCCATCCCCGACACGTCTGAGAGCACTGGCCTGATA
TCGGCGGCGGACCGCATGAAGGCCCTGCACGCGACGCAGCTGGCTCAGGCCGCAGAGATGGCCGAGCTGCGCCGC
CGAAGCGAGATCTTGGTCCGCTCGTGGTACCAGTACCGTCTCCTTGCCAGCTCGCAGTTCATTGCCGACGCCCAA
GGCCGTATGGAAGAAGTCGAGCGACGAGTGAGACGAAGGGAACGGGCCAAGGAGGAAGAAGAGGAATTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail