Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2570
Gene name
LocationContig_1618:803..2441
Strand-
Gene length (bp)1638
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14378 PAP2_3 PAP2 superfamily 9.3E-08 154 212
PF14378 PAP2_3 PAP2 superfamily 5.2E-26 227 375

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 184 206 22
2 243 260 17
3 307 329 22
4 336 354 18
5 364 386 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2570
MAVGAFLEPLVVVTLLFGGAWFNRSTDVDLWRHEPAWTRKRTDELDKEEADLDDDPLAGSDTWSGSSTPTLAPHE
VPALRRRKLCFLGYQRIVSTPNTLLFKDRFLSRVLQKFPFLAEAWYWALIYWVYQVGRALTALSLVEGTVNVARK
HALQLIHLEQRLNIFYEVPVQRWFLARPTLMHWINRVYSFIHIPGTIFFLVALFYLTTTRKRMAVAGRVRSDPVA
AGPALYEARRRTMAMCNLVAFVVFTLWPCMPPRLLSDPDYRGDYAAEAKSYGFVDTVHGKGGESSVWTTNRFCNQ
YAAMPSLHFGYSLLIGLTVATLPISGLRATSWKRAGIVALGMSYPALILTAIVATANHFVLDAVAGALVCAVAWR
ANGLLLNLCVVEDYFLWLLRIHKPVNHTDPDTAVEPDSQAGLLLSEDM*
Coding >Hirsu2|2570
ATGGCCGTGGGCGCTTTTCTCGAACCGCTCGTCGTCGTCACCCTGCTCTTCGGCGGCGCTTGGTTCAACCGCAGC
ACAGACGTTGACCTGTGGCGCCACGAGCCGGCATGGACGCGCAAGAGGACGGATGAGCTCGACAAGGAGGAGGCC
GATCTCGACGACGACCCTCTCGCCGGATCCGACACCTGGAGCGGCAGTTCGACGCCGACGCTCGCCCCCCACGAG
GTCCCGGCCCTGCGCCGGCGCAAGCTCTGCTTCCTGGGCTACCAGCGCATCGTCTCGACGCCCAACACGCTCCTC
TTCAAGGACCGGTTCCTGAGCCGCGTCCTGCAAAAATTCCCCTTCCTCGCCGAGGCCTGGTATTGGGCCCTGATC
TATTGGGTCTACCAGGTCGGACGGGCCCTGACGGCCCTGTCGCTCGTCGAGGGCACCGTCAACGTCGCCCGCAAG
CATGCGCTCCAGCTCATCCACCTGGAGCAGCGGCTCAACATCTTTTACGAGGTGCCGGTCCAGCGCTGGTTCCTG
GCCCGCCCGACGCTGATGCACTGGATCAACCGCGTCTACTCCTTCATCCACATCCCCGGCACCATCTTCTTCCTC
GTCGCCCTCTTCTACCTGACGACGACGCGCAAGCGCATGGCCGTCGCCGGCCGCGTCCGCTCCGACCCCGTCGCC
GCGGGGCCCGCCCTGTACGAGGCCCGCCGCCGCACCATGGCCATGTGCAACCTCGTCGCCTTCGTCGTCTTCACC
CTGTGGCCCTGCATGCCGCCGCGCCTGCTGAGCGACCCGGACTACAGGGGGGACTACGCGGCCGAGGCCAAGAGT
TACGGCTTCGTCGACACCGTCCACGGCAAGGGCGGCGAGAGCAGCGTCTGGACCACGAACCGGTTCTGCAACCAA
TACGCTGCCATGCCGTCGCTTCACTTCGGCTACTCCCTGCTGATTGGGCTGACAGTCGCGACGCTACCCATTTCC
GGCCTGCGCGCCACGTCGTGGAAGCGGGCCGGGATCGTCGCGCTCGGCATGTCGTATCCGGCCCTGATCCTGACG
GCCATCGTGGCGACGGCCAACCACTTCGTGCTCGACGCCGTGGCCGGCGCCCTGGTGTGCGCCGTCGCCTGGCGG
GCCAACGGGCTGCTGCTCAACCTGTGCGTGGTCGAGGACTACTTCCTGTGGCTGCTCCGCATCCACAAGCCCGTC
AACCACACCGACCCGGACACGGCCGTCGAGCCCGACAGCCAGGCTGGCCTGCTGCTGAGCGAAGACATGTGA
Transcript >Hirsu2|2570
ATGGCCGTGGGCGCTTTTCTCGAACCGCTCGTCGTCGTCACCCTGCTCTTCGGCGGCGCTTGGTTCAACCGCAGC
ACAGACGTTGACCTGTGGCGCCACGAGCCGGCATGGACGCGCAAGAGGACGGATGAGCTCGACAAGGAGGAGGCC
GATCTCGACGACGACCCTCTCGCCGGATCCGACACCTGGAGCGGCAGTTCGACGCCGACGCTCGCCCCCCACGAG
GTCCCGGCCCTGCGCCGGCGCAAGCTCTGCTTCCTGGGCTACCAGCGCATCGTCTCGACGCCCAACACGCTCCTC
TTCAAGGACCGGTTCCTGAGCCGCGTCCTGCAAAAATTCCCCTTCCTCGCCGAGGCCTGGTATTGGGCCCTGATC
TATTGGGTCTACCAGGTCGGACGGGCCCTGACGGCCCTGTCGCTCGTCGAGGGCACCGTCAACGTCGCCCGCAAG
CATGCGCTCCAGCTCATCCACCTGGAGCAGCGGCTCAACATCTTTTACGAGGTGCCGGTCCAGCGCTGGTTCCTG
GCCCGCCCGACGCTGATGCACTGGATCAACCGCGTCTACTCCTTCATCCACATCCCCGGCACCATCTTCTTCCTC
GTCGCCCTCTTCTACCTGACGACGACGCGCAAGCGCATGGCCGTCGCCGGCCGCGTCCGCTCCGACCCCGTCGCC
GCGGGGCCCGCCCTGTACGAGGCCCGCCGCCGCACCATGGCCATGTGCAACCTCGTCGCCTTCGTCGTCTTCACC
CTGTGGCCCTGCATGCCGCCGCGCCTGCTGAGCGACCCGGACTACAGGGGGGACTACGCGGCCGAGGCCAAGAGT
TACGGCTTCGTCGACACCGTCCACGGCAAGGGCGGCGAGAGCAGCGTCTGGACCACGAACCGGTTCTGCAACCAA
TACGCTGCCATGCCGTCGCTTCACTTCGGCTACTCCCTGCTGATTGGGCTGACAGTCGCGACGCTACCCATTTCC
GGCCTGCGCGCCACGTCGTGGAAGCGGGCCGGGATCGTCGCGCTCGGCATGTCGTATCCGGCCCTGATCCTGACG
GCCATCGTGGCGACGGCCAACCACTTCGTGCTCGACGCCGTGGCCGGCGCCCTGGTGTGCGCCGTCGCCTGGCGG
GCCAACGGGCTGCTGCTCAACCTGTGCGTGGTCGAGGACTACTTCCTGTGGCTGCTCCGCATCCACAAGCCCGTC
AACCACACCGACCCGGACACGGCCGTCGAGCCCGACAGCCAGGCTGGCCTGCTGCTGAGCGAAGACATGTGA
Gene >Hirsu2|2570
ATGGCCGTGGGCGCTTTTCTCGAACCGCTCGTCGTCGTCACCCTGCTCTTCGGCGGCGCTTGGTTCAACCGCAGC
ACAGACGTTGACCTGTGGCGCCACGAGCCGGCATGGACGCGCAAGAGGACGGATGAGCTCGACAAGGAGGAGGCC
GATCTCGACGACGACCCTCTCGCCGGATCCGACACCTGGAGCGGCAGTTCGACGCCGACGCTCGCCCCCCACGAG
GTCCCGGCCCTGCGCCGGCGCAAGCTCTGCTTCCTGGGCTACCAGCGCATCGTCTCGACGCCCAACACGCTCCTC
TTCAAGGACCGGTTCCTGAGCCGCGTCCTGCAAAAATTCCCCTTCCTCGCCGAGGCCTGGTATTGGGCCCTGATC
TATTGGGTGAGCTCTCCTCGGTCCGGTCGACGGGCATACCGCTAACGATGGTCCCTCGCGCCAGGTCTACCAGGT
CGGACGGGCCCTGACGGCCCTGTCGCTCGTCGAGGGCACCGTCAACGTCGCCCGCAAGCATGCGCTCCAGCTCAT
CCACCTGGAGCAGCGGCTCAACATCTTTTACGAGGTGCCGGTCCAGCGCTGGTTCCTGGCCCGCCCGACGCTGAT
GCACTGGATCAACCGCGTCTACTCCTTCATCCACATCCCCGGCACCATCTTCTTCCTCGTCGCCCTCTTCTACCT
GACGACGACGCGCAAGCGCATGGCCGTCGCCGGCCGCGTCCGCTCCGACCCCGTCGCCGCGGGGCCCGCCCTGTA
CGAGGCCCGCCGCCGCACCATGGCCATGTGCAACCTCGTCGCCTTCGTCGTCTTCACCCTGTGGCCCTGCATGCC
GCCGCGCCTGCTGAGCGACCCGGACTACAGGGGGGACTACGCGGCCGAGGCCAAGAGTTACGGCTTCGTCGACAC
CGTCCACGGCAAGGGCGGCGAGAGCAGCGTCTGGACCACGAACCGGTTCTGCAACCAATACGGTGCGTACACGCC
CAATTTCTGTTTTCCTTACCGCCGTTCCCCCTTTTCTTCCACCGCCTCCTTTTGTTGTTCGTTTGTTGCCGCGCG
TCTGTTGGGCTTTGGAGTCGCGGCATCGTCCGGCTGGATTTTGCCGAGACACGCCGGGGAGATGCGAGCGATTGT
AGTAAGCCCACAAGCAGAGAAGTGGACGGAACAGACGGCACGAGAAAGGGCATTGCCTGGAAAAACACCCGACGA
CACCAAAAAAAGAAATAAGATCAAGACGCAAAAAAAAAAAAAAGGTCGAAAGGGGCTAACGATTCAGCAGCTGCC
ATGCCGTCGCTTCACTTCGGCTACTCCCTGCTGATTGGGCTGACAGTCGCGACGCTACCCATTTCCGGCCTGCGC
GCCACGTCGTGGAAGCGGGCCGGGATCGTCGCGCTCGGCATGTCGTATCCGGCCCTGATCCTGACGGCCATCGTG
GCGACGGCCAACCACTTCGTGCTCGACGCCGTGGCCGGCGCCCTGGTGTGCGCCGTCGCCTGGCGGGCCAACGGG
CTGCTGCTCAACCTGTGCGTGGTCGAGGACTACTTCCTGTGGCTGCTCCGCATCCACAAGCCCGTCAACCACACC
GACCCGGACACGGCCGTCGAGCCCGACAGCCAGGCTGGCCTGCTGCTGAGCGAAGACATGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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