Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2565
Gene name
Location	Contig_1616:387..1395
Strand	+
Gene length (bp)	1008
Transcript length (bp)	864
Coding sequence length (bp)	864
Protein length (aa)	288

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04893	Yip1	Yip1 domain	6.3E-13	92	251

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	261	9.0E-42
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	16	260	2.0E-31
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	54	260	4.0E-31
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	16	260	8.0E-31
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	54	260	1.0E-30

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	261	9.0E-42
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	16	260	2.0E-31
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	54	260	4.0E-31
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	16	260	8.0E-31
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	54	260	1.0E-30
sp\|Q54TS4\|YIPF1_DICDI	Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1	43	264	6.0E-27
sp\|Q99LP8\|YIPF2_MOUSE	Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1	57	260	3.0E-26
sp\|Q9BWQ6\|YIPF2_HUMAN	Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1	65	270	6.0E-25
sp\|Q5XIT3\|YIPF2_RAT	Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1	32	260	2.0E-22
sp\|P53108\|YIP5_YEAST	Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1	68	260	4.0E-16

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GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	108	130	22
2	145	167	22
3	180	199	19
4	204	226	22
5	239	261	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2565 MSGSGYDAVVDVDDEGDLGHTDLQEDLEFHHSNFGESAAGNHKGRLPSGLPPPATTSSSSPKRLLWSLSFYAQFF DVDTSAVLSRCGAALFPCANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSTTKSVPFAYDFRLLSGAAG LVYGYTLFIPISLFVALRYFGSESANLLECWALYGYSNLIWIPVAIISWSPIEILNWVFVAVGFGLSVVFLVRNL YPVLSATDRQVSKVLLILVVLLHAGLSLTIKILFFAHGSPVARAPGEGGPDSQKSNKPPARH*
Coding	>Hirsu2\|2565 ATGTCTGGATCCGGATACGACGCGGTGGTAGATGTGGACGACGAGGGAGACCTCGGCCACACGGACCTGCAGGAG GACCTCGAATTCCATCACTCCAACTTCGGCGAGTCTGCGGCGGGAAACCACAAAGGCCGGCTTCCCTCTGGTCTC CCGCCGCCCGCGACGACATCGTCCTCGTCGCCGAAACGCTTGCTATGGTCACTATCATTCTATGCACAGTTCTTC GACGTGGACACATCAGCAGTCCTGTCGCGCTGCGGGGCCGCCCTCTTCCCATGTGCAAACTTCCTAGACGTGCTG GAGGGCAATCCCGATCTCTACGGTCCCTTTTGGATCGCGACGACAGTGGTCTTGATCTTGTTCCTCGGCGGCACA ATCAGCCAGTATCTATCAACGACAAAGTCTGTGCCTTTCGCGTACGACTTTCGGCTGCTGAGTGGCGCCGCTGGA CTCGTCTACGGATACACACTCTTCATACCAATTTCATTGTTCGTCGCCCTCCGGTACTTTGGCAGCGAATCAGCC AACCTGCTTGAGTGTTGGGCCTTGTACGGTTATTCAAACCTAATCTGGATCCCGGTTGCCATTATCAGTTGGTCG CCGATCGAGATCCTCAATTGGGTGTTCGTGGCCGTCGGCTTCGGCCTCTCCGTCGTCTTCCTTGTCCGCAACCTG TATCCAGTTCTGAGTGCGACCGATCGCCAAGTCAGCAAGGTGCTTCTCATACTCGTGGTGCTACTCCACGCTGGA CTATCACTCACCATCAAGATACTGTTTTTTGCTCATGGCAGTCCCGTGGCACGGGCGCCGGGCGAAGGCGGACCC GACAGCCAGAAGAGCAACAAACCGCCAGCCAGGCACTAG
Transcript	>Hirsu2\|2565 ATGTCTGGATCCGGATACGACGCGGTGGTAGATGTGGACGACGAGGGAGACCTCGGCCACACGGACCTGCAGGAG GACCTCGAATTCCATCACTCCAACTTCGGCGAGTCTGCGGCGGGAAACCACAAAGGCCGGCTTCCCTCTGGTCTC CCGCCGCCCGCGACGACATCGTCCTCGTCGCCGAAACGCTTGCTATGGTCACTATCATTCTATGCACAGTTCTTC GACGTGGACACATCAGCAGTCCTGTCGCGCTGCGGGGCCGCCCTCTTCCCATGTGCAAACTTCCTAGACGTGCTG GAGGGCAATCCCGATCTCTACGGTCCCTTTTGGATCGCGACGACAGTGGTCTTGATCTTGTTCCTCGGCGGCACA ATCAGCCAGTATCTATCAACGACAAAGTCTGTGCCTTTCGCGTACGACTTTCGGCTGCTGAGTGGCGCCGCTGGA CTCGTCTACGGATACACACTCTTCATACCAATTTCATTGTTCGTCGCCCTCCGGTACTTTGGCAGCGAATCAGCC AACCTGCTTGAGTGTTGGGCCTTGTACGGTTATTCAAACCTAATCTGGATCCCGGTTGCCATTATCAGTTGGTCG CCGATCGAGATCCTCAATTGGGTGTTCGTGGCCGTCGGCTTCGGCCTCTCCGTCGTCTTCCTTGTCCGCAACCTG TATCCAGTTCTGAGTGCGACCGATCGCCAAGTCAGCAAGGTGCTTCTCATACTCGTGGTGCTACTCCACGCTGGA CTATCACTCACCATCAAGATACTGTTTTTTGCTCATGGCAGTCCCGTGGCACGGGCGCCGGGCGAAGGCGGACCC GACAGCCAGAAGAGCAACAAACCGCCAGCCAGGCACTAG
Gene	>Hirsu2\|2565 ATGTCTGGATCCGGATACGACGCGGTGGTAGATGTGGACGACGAGGTAGGCGGTGGTGAAGTTCGCGGGGAACGC TGCTAAGCGATGTGCCAGGGAGACCTCGGCCACACGGACCTGCAGGAGGACCTCGAATTCCATCACTCCAACTTC GGCGAGTCTGCGGCGGGAAACCACAAAGGCCGGCTTCCCTCTGGTCTCCCGCCGCCCGCGACGACATCGTCCTCG TCGCCGAAACGCTTGCTATGGTCACTATCATTCTATGCACAGTTCTTCGACGTGGACACATCAGCAGTCCTGTCG CGCTGCGGGGCCGCCCTCTTCCCATGTGCAAACTTCCTAGACGTGCTGGAGGGCAATCCCGATCTCTACGGTCCC TTTTGGATCGCGACGACAGTGGTCTTGATCTTGTTCCTCGGCGGCACAATCAGCCAGTATCTATCAACGACAAAG TCTGTGCCTTTCGCGTACGACTTTCGGCTGCTGAGTGGTAGGAAGCGAGACCCCTTCTCCCCTCCGTCCCTCCTC TCGTCAAATCCGATGGATATTGAGTGTCTGAGGTGGCTGACTCGCGTGGGCCGGGAAGGCGCCGCTGGACTCGTC TACGGATACACACTCTTCATACCAATTTCATTGTTCGTCGCCCTCCGGTACTTTGGCAGCGAATCAGCCAACCTG CTTGAGTGTTGGGCCTTGTACGGTTATTCAAACCTAATCTGGATCCCGGTTGCCATTATCAGTTGGTCGCCGATC GAGATCCTCAATTGGGTGTTCGTGGCCGTCGGCTTCGGCCTCTCCGTCGTCTTCCTTGTCCGCAACCTGTATCCA GTTCTGAGTGCGACCGATCGCCAAGTCAGCAAGGTGCTTCTCATACTCGTGGTGCTACTCCACGCTGGACTATCA CTCACCATCAAGATACTGTTTTTTGCTCATGGCAGTCCCGTGGCACGGGCGCCGGGCGAAGGCGGACCCGACAGC CAGAAGAGCAACAAACCGCCAGCCAGGCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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