Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2564
Gene name
LocationContig_1615:1142..2541
Strand-
Gene length (bp)1399
Transcript length (bp)1215
Coding sequence length (bp)1215
Protein length (aa) 405

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 4.2E-23 42 329

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 52 330 1.0E-55
sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 45 330 6.0E-55
sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 44 330 9.0E-55
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 44 330 2.0E-54
sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 44 330 2.0E-54
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Swissprot ID Swissprot Description Start End E-value
sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=1 SV=1 52 330 1.0E-55
sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 45 330 6.0E-55
sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 44 330 9.0E-55
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 44 330 2.0E-54
sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 44 330 2.0E-54
sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 44 330 8.0E-54
sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1 44 330 5.0E-50
sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 52 330 4.0E-49
sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 43 355 2.0E-25
sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 43 355 3.0E-24
sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 45 338 5.0E-24
sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 14 346 1.0E-22
sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 45 337 5.0E-22
sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 31 347 5.0E-18
sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 16 337 1.0E-17
sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 30 326 4.0E-17
sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 34 347 1.0E-16
sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 30 326 2.0E-14
sp|Q6ICL7|S35E4_HUMAN Solute carrier family 35 member E4 OS=Homo sapiens GN=SLC35E4 PE=2 SV=1 20 330 4.0E-12
sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1 52 331 9.0E-11
sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 43 346 2.0E-10
sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 48 337 3.0E-10
sp|Q69VR7|PPT1_ORYSJ Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 48 337 6.0E-10
sp|Q5RKL7|S35E4_RAT Solute carrier family 35 member E4 OS=Rattus norvegicus GN=Slc35e4 PE=2 SV=1 46 330 7.0E-10
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 9 346 3.0E-09
sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 30 346 4.0E-08
sp|Q5VQL3|PPT3_ORYSJ Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 30 330 1.0E-07
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 9 345 1.0E-07
sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1 68 346 2.0E-07
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 68 346 2.0E-07
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 68 346 4.0E-07
sp|Q8K3D6|S35E4_MOUSE Solute carrier family 35 member E4 OS=Mus musculus GN=Slc35e4 PE=2 SV=2 1 330 2.0E-06
sp|Q8RXN3|PPT1_ARATH Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 12 329 6.0E-06
sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1 126 329 6.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 39 58 19
2 73 95 22
3 108 127 19
4 137 159 22
5 166 183 17
6 187 209 22
7 222 244 22
8 259 281 22
9 286 308 22
10 313 332 19
11 360 382 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2564
MSGEEKTRVSGDVSRAESAPTLPTVNPLADKAAPAKAALHPALYVITWIGFSSSVILFNKWLLDTLNFRYPVILT
TYHLTFATIVTQFMARWTTLLDGRKSVKMTGRVYLRAVVPIGIFFSLSLICGNLTYLYLSVAFIQMLKATTPVAV
LISGWTLGVSQPNLRQFLNVSAIVVGVIIASFGEIHFVPVGVLFQIGGIVFEALRLTMVQRLLSSADFKMDPLVS
LYYFAPICAVMNGVVALIWEFPKVSMADVYNVGLFTFFLNGLCAFMLNVSVVFLIGKTSAVVLTLCGVLKDIMLV
IASMMIWGTQVSALQFFGYSIALGGMVYYKLGYDQLKGYVGEANRQWAEFGARKPVLRKIALITMSAFVLFAFFG
TLAPTYAPNYDPTKLTNEVTSRFGKAHAQ*
Coding >Hirsu2|2564
ATGTCTGGCGAGGAAAAGACCCGCGTCTCCGGCGACGTCTCGCGCGCCGAGTCGGCGCCCACGCTGCCGACGGTC
AATCCCCTGGCCGACAAGGCCGCGCCCGCCAAGGCGGCCCTGCACCCGGCTCTCTACGTCATAACCTGGATCGGC
TTCAGCTCGTCCGTCATCCTCTTCAACAAATGGCTCCTCGATACCCTCAACTTCCGCTACCCCGTCATCCTCACC
ACCTATCATCTGACCTTCGCGACCATTGTCACCCAGTTCATGGCGCGATGGACGACACTGCTTGATGGCCGCAAG
TCCGTCAAGATGACGGGCCGCGTCTACCTGCGGGCCGTCGTCCCTATCGGCATCTTCTTCAGCCTGAGTCTCATC
TGCGGAAACCTCACCTACCTCTATCTCTCCGTCGCCTTCATCCAGATGCTCAAGGCCACCACGCCCGTCGCCGTC
CTCATCTCCGGCTGGACTCTGGGCGTCTCGCAGCCCAACCTGAGGCAGTTCCTCAACGTCTCCGCCATCGTCGTC
GGCGTCATCATCGCCTCCTTCGGCGAGATCCACTTCGTCCCCGTCGGCGTGCTCTTCCAGATCGGAGGCATCGTC
TTCGAGGCCCTTCGTCTCACCATGGTCCAACGACTCCTGAGCTCGGCCGACTTCAAGATGGACCCCCTCGTCTCC
CTCTACTACTTTGCTCCCATCTGCGCCGTCATGAACGGAGTCGTCGCCCTCATCTGGGAGTTCCCCAAGGTCTCC
ATGGCCGATGTCTACAACGTCGGCCTCTTCACCTTCTTCCTCAACGGTCTCTGCGCCTTCATGCTCAACGTTTCC
GTCGTCTTCCTGATCGGCAAGACGTCGGCCGTCGTGCTCACCCTCTGCGGTGTTCTCAAGGACATCATGCTCGTC
ATCGCCTCCATGATGATCTGGGGCACCCAGGTCTCGGCCCTGCAGTTCTTCGGCTACTCGATCGCTCTCGGCGGC
ATGGTCTACTACAAGCTCGGCTATGACCAGCTCAAGGGCTACGTCGGCGAAGCCAACCGCCAGTGGGCCGAGTTT
GGCGCCCGCAAGCCCGTGCTCCGCAAGATTGCCCTCATCACCATGTCGGCCTTTGTGCTCTTCGCCTTCTTCGGG
ACTCTGGCACCCACCTACGCCCCCAACTACGACCCGACCAAGCTCACCAACGAGGTCACCAGCCGCTTCGGAAAG
GCTCACGCCCAATGA
Transcript >Hirsu2|2564
ATGTCTGGCGAGGAAAAGACCCGCGTCTCCGGCGACGTCTCGCGCGCCGAGTCGGCGCCCACGCTGCCGACGGTC
AATCCCCTGGCCGACAAGGCCGCGCCCGCCAAGGCGGCCCTGCACCCGGCTCTCTACGTCATAACCTGGATCGGC
TTCAGCTCGTCCGTCATCCTCTTCAACAAATGGCTCCTCGATACCCTCAACTTCCGCTACCCCGTCATCCTCACC
ACCTATCATCTGACCTTCGCGACCATTGTCACCCAGTTCATGGCGCGATGGACGACACTGCTTGATGGCCGCAAG
TCCGTCAAGATGACGGGCCGCGTCTACCTGCGGGCCGTCGTCCCTATCGGCATCTTCTTCAGCCTGAGTCTCATC
TGCGGAAACCTCACCTACCTCTATCTCTCCGTCGCCTTCATCCAGATGCTCAAGGCCACCACGCCCGTCGCCGTC
CTCATCTCCGGCTGGACTCTGGGCGTCTCGCAGCCCAACCTGAGGCAGTTCCTCAACGTCTCCGCCATCGTCGTC
GGCGTCATCATCGCCTCCTTCGGCGAGATCCACTTCGTCCCCGTCGGCGTGCTCTTCCAGATCGGAGGCATCGTC
TTCGAGGCCCTTCGTCTCACCATGGTCCAACGACTCCTGAGCTCGGCCGACTTCAAGATGGACCCCCTCGTCTCC
CTCTACTACTTTGCTCCCATCTGCGCCGTCATGAACGGAGTCGTCGCCCTCATCTGGGAGTTCCCCAAGGTCTCC
ATGGCCGATGTCTACAACGTCGGCCTCTTCACCTTCTTCCTCAACGGTCTCTGCGCCTTCATGCTCAACGTTTCC
GTCGTCTTCCTGATCGGCAAGACGTCGGCCGTCGTGCTCACCCTCTGCGGTGTTCTCAAGGACATCATGCTCGTC
ATCGCCTCCATGATGATCTGGGGCACCCAGGTCTCGGCCCTGCAGTTCTTCGGCTACTCGATCGCTCTCGGCGGC
ATGGTCTACTACAAGCTCGGCTATGACCAGCTCAAGGGCTACGTCGGCGAAGCCAACCGCCAGTGGGCCGAGTTT
GGCGCCCGCAAGCCCGTGCTCCGCAAGATTGCCCTCATCACCATGTCGGCCTTTGTGCTCTTCGCCTTCTTCGGG
ACTCTGGCACCCACCTACGCCCCCAACTACGACCCGACCAAGCTCACCAACGAGGTCACCAGCCGCTTCGGAAAG
GCTCACGCCCAATGA
Gene >Hirsu2|2564
ATGTCTGGCGAGGAAAAGACCCGCGTCTCCGGCGACGTCTCGCGCGCCGAGTCGGCGCCCACGCTGCCGACGGTC
AATCCCCTGGCCGACAAGGCCGCGCCCGCCAAGGCGGCCCTGCACCCGGCTCTCTACGTCATGTGAGTCTCGGCG
ACGCGCCTGCTGCCGCGAGGTCGTGAAGCTGACGCGTTGCGGAATGCAGAACCTGGATCGGCTTCAGCTCGTCCG
TCATCCTCTTCAACAAATGGCTCCTCGATACCCTCAACTTCCGTGCGTCCTCCACGCCAGAACACGGCCTGCACG
CGGCCATGGCAGCTAACCGCCCAACTCGCAGGCTACCCCGTCATCCTCACCACCTATCATCTGACCTTCGCGACC
ATTGTCACCCAGTTCATGGCGCGATGGACGACACTGCTTGATGGCCGCAAGTCCGTCAAGATGACGGGCCGCGTC
TACCTGCGGGCCGTCGTCCCTATCGGCATCTTCTTCAGCCTGAGTCTCATCTGCGGAAACCTCACCTACCTCTAT
CTCTCCGTCGCCTTCATCCAGATGCTCAAGGCCACCACGCCCGTCGCCGTCCTCATCTCCGGCTGGACTCTGGGC
GTCTCGCAGCCCAACCTGAGGCAGTTCCTCAACGTCTCCGCCATCGTCGTCGGCGTCATCATCGCCTCCTTCGGC
GAGATCCACTTCGTCCCCGTCGGCGTGCTCTTCCAGATCGGAGGCATCGTCTTCGAGGCCCTTCGTCTCACCATG
GTCCAACGACTCCTGAGCTCGGCCGACTTCAAGATGGACCCCCTCGTCTCCCTCTACTACTTTGCTCCCATCTGC
GCCGTCATGAACGGAGTCGTCGCCCTCATCTGGGAGTTCCCCAAGGTCTCCATGGCCGATGTCTACAACGTCGGC
CTCTTCACCTTCTTCCTCAACGGTCTCTGCGCCTTCATGCTCAACGTTTCCGTCGTCTTCCTGGTACGCTCACCC
TCCCCCGTGCGCCTCTCTGGCCCAGCACGCTAACGCATTCCTTCAGATCGGCAAGACGTCGGCCGTCGTGCTCAC
CCTCTGCGGTGTTCTCAAGGACATCATGCTCGTCATCGCCTCCATGATGATCTGGGGCACCCAGGTCTCGGCCCT
GCAGTTCTTCGGCTACTCGATCGCTCTCGGCGGCATGGTCTACTACAAGCTCGGCTATGACCAGCTCAAGGGCTA
CGTCGGCGAAGCCAACCGCCAGTGGGCCGAGTTTGGCGCCCGCAAGCCCGTGCTCCGCAAGATTGCCCTCATCAC
CATGTCGGCCTTTGTGCTCTTCGCCTTCTTCGGGACTCTGGCACCCACCTACGCCCCCAACTACGACCCGACCAA
GCTCACCAACGAGGTCACCAGCCGCTTCGGAAAGGCTCACGCCCAATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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