© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2562 |
| Gene name | |
| Location | Contig_1614:4090..5052 |
| Strand | + |
| Gene length (bp) | 962 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.5E-12 | 27 | 192 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 9.9E-08 | 39 | 130 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.5E-06 | 40 | 132 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2562 MPNDDAEQMREGVKHKLYSDYILGGKLFLAPIGKNPQKIVDLGTGFGFWPLDVAEKFPSARIIGTDLSPVQPQWT PPNVEFRVEDLDDELRPWTKIYRDADLIHLRFLLMTVRRPRSILRRCLENLKPGGWVEVHEIIPVAFSDDGTAGD GHPVHALYRLIEGPFSTLYGWKFGIAADLGDMLRELGFVNVTVRHNAIPIGRWHHESRMREMGIFAQSILSDWVI TMLTRHETLGLDADEAQDLGQRIIDAFDNTRIHAQHNWVDVWAQKPTP* |
| Coding | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGTTGCCGAGAAGTTCCCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACG CCGCCAAACGTCGAGTTTCGCGTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCC GACCTGATCCACCTGCGCTTCCTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGAAT CTGAAACCCGGCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGAC GGTCATCCCGTCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATC GCGGCCGACCTGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATC GGGCGGTGGCACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATC ACCATGCTCACCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGAC GCCTTCGACAACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |
| Transcript | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGTTGCCGAGAAGTTCCCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACG CCGCCAAACGTCGAGTTTCGCGTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCC GACCTGATCCACCTGCGCTTCCTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGAAT CTGAAACCCGGCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGAC GGTCATCCCGTCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATC GCGGCCGACCTGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATC GGGCGGTGGCACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATC ACCATGCTCACCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGAC GCCTTCGACAACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |
| Gene | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGGTTCGTGCAGTCCCGAACGAGGTGCCTCTCCAAACCTGACGCGAGCCTCCCCAGTTGCCGAGAAGTTC CCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACGCCGCCAAACGTCGAGTTTCGC GTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCCGACCTGATCCACCTGCGCTTC CTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGTACGTCTGCCTCCGCGCCGCCTGC GTCTGCCGCAGCCCTCGGCGGCGCCTGTGGCCAGCCACGTCTGCTGACTTGCCGAGTCGAGGAATCTGAAACCCG GCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGACGGTCATCCCG TCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATCGCGGCCGACC TGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATCGGGCGGTGGC ACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATCACCATGCTCA CCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGACGCCTTCGACA ACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |