© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2562 |
| Gene name | |
| Location | Contig_1614:4090..5052 |
| Strand | + |
| Gene length (bp) | 962 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 2.4E-12 | 27 | 192 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.4E-07 | 39 | 130 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.7E-06 | 40 | 132 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.6644 | 0.5904 | 0.0274 | 0.0652 | 0.1233 | 0.0213 | 0.1626 | 0.1786 | 0.2374 | 0.0044 |
| Orthofinder run ID | 4 |
| Orthogroup | 6073 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2562 MPNDDAEQMREGVKHKLYSDYILGGKLFLAPIGKNPQKIVDLGTGFGFWPLDVAEKFPSARIIGTDLSPVQPQWT PPNVEFRVEDLDDELRPWTKIYRDADLIHLRFLLMTVRRPRSILRRCLENLKPGGWVEVHEIIPVAFSDDGTAGD GHPVHALYRLIEGPFSTLYGWKFGIAADLGDMLRELGFVNVTVRHNAIPIGRWHHESRMREMGIFAQSILSDWVI TMLTRHETLGLDADEAQDLGQRIIDAFDNTRIHAQHNWVDVWAQKPTP* |
| Coding | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGTTGCCGAGAAGTTCCCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACG CCGCCAAACGTCGAGTTTCGCGTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCC GACCTGATCCACCTGCGCTTCCTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGAAT CTGAAACCCGGCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGAC GGTCATCCCGTCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATC GCGGCCGACCTGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATC GGGCGGTGGCACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATC ACCATGCTCACCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGAC GCCTTCGACAACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |
| Transcript | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGTTGCCGAGAAGTTCCCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACG CCGCCAAACGTCGAGTTTCGCGTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCC GACCTGATCCACCTGCGCTTCCTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGAAT CTGAAACCCGGCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGAC GGTCATCCCGTCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATC GCGGCCGACCTGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATC GGGCGGTGGCACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATC ACCATGCTCACCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGAC GCCTTCGACAACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |
| Gene | >Hirsu2|2562 ATGCCCAACGACGACGCCGAGCAGATGAGAGAAGGCGTCAAGCACAAGCTCTATTCCGACTACATACTCGGCGGG AAACTCTTCCTCGCACCCATCGGGAAGAATCCGCAGAAGATCGTCGACCTGGGGACGGGATTCGGATTCTGGCCA CTCGATGGTTCGTGCAGTCCCGAACGAGGTGCCTCTCCAAACCTGACGCGAGCCTCCCCAGTTGCCGAGAAGTTC CCGAGTGCTCGCATCATCGGCACGGACCTGTCGCCAGTCCAGCCGCAATGGACGCCGCCAAACGTCGAGTTTCGC GTCGAGGATCTCGACGATGAGCTCCGCCCGTGGACAAAGATCTACCGTGACGCCGACCTGATCCACCTGCGCTTC CTGCTGATGACGGTGCGGCGGCCTCGGAGCATCTTGCGGAGATGCCTGGAGTACGTCTGCCTCCGCGCCGCCTGC GTCTGCCGCAGCCCTCGGCGGCGCCTGTGGCCAGCCACGTCTGCTGACTTGCCGAGTCGAGGAATCTGAAACCCG GCGGCTGGGTCGAGGTGCACGAAATCATCCCCGTCGCCTTCTCGGACGACGGCACGGCCGGCGACGGTCATCCCG TCCACGCGCTGTACCGCCTGATCGAAGGGCCCTTCTCCACGCTGTACGGGTGGAAGTTCGGGATCGCGGCCGACC TGGGCGACATGCTGCGCGAGCTCGGCTTCGTCAACGTCACGGTGCGGCACAACGCGATCCCCATCGGGCGGTGGC ACCACGAGTCGAGGATGAGAGAGATGGGCATCTTCGCCCAGAGCATCCTCTCGGACTGGGTCATCACCATGCTCA CCCGGCACGAGACGCTGGGCCTCGACGCGGACGAGGCGCAGGACCTCGGCCAACGCATCATCGACGCCTTCGACA ACACCAGGATCCACGCCCAGCACAACTGGGTCGACGTATGGGCCCAGAAGCCAACCCCTTGA |