© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2554 |
| Gene name | |
| Location | Contig_161:27909..29966 |
| Strand | + |
| Gene length (bp) | 2057 |
| Transcript length (bp) | 1995 |
| Coding sequence length (bp) | 1995 |
| Protein length (aa) | 665 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1819 | 0.1105 | 0.9086 | 0.1525 | 0.1109 | 0.0304 | 0.2278 | 0.0957 | 0.137 | 0.0179 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999748 |
| Orthofinder run ID | 4 |
| Orthogroup | 6072 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2554 MLKWHSSLIFMPLALVAALEPCLDLDVSQGLDEEPVLVPVPQPDKDLMDLGNIELVKDVSMLWKQEQSGSISVSS QMKYPTVKLEEIGFIDSVKCDSSANSLQVAFKDDKAFKTAQEKWPADGQFLVVTNNMGNCDDETERGFYFAEAVT ADEGSRRLDIKGKRTELKETAGEEMDIVIEEMKPQLARRAEFSKTIDVKYDLPQPKEIFNKWNTSLTAESFHIDA SLTFSGKIKMSWFKVTECWFDMSGHAALDLALKLQIQAQFEKQVSTSTPPMTFPIVAIPGIIAIGPAVSAGIGVD ITAVAAIYARAHAYLAFPDAQWRVDLVNSSKSISRGLEPTYNASVQLGGSASLMVNPFLDLRFMLNVQILAGLAN LNGGIKIVPKFANTFTVEAHGGVWSTPGTTQPGPGAVEPTPGKTTSEGKGQGRKSPNGLDYGDGKPKKGRGAANS VRGLVRRASGTYEFSENRESSTKLPDEGKQGTYRPLEEDTVSTEERPQKGKKPNESKELPDQSPEGTNRPINEDD AGTEKKPQKGKNATSKPKKGKKPKESKELPDQGPAGTHRPINEDDVGKDGKGQKGGEREKKEKEKKKKTPEEIKK KKKAKGSGKQATDGSSKCPNGLSLKSDFQLQILAFILTYETSLWTKRWPLYEGCYQLPLIGDGE* |
| Coding | >Hirsu2|2554 ATGTTGAAATGGCACTCATCACTCATTTTCATGCCCCTGGCACTGGTGGCGGCCCTAGAGCCCTGTTTAGATCTG GACGTATCGCAAGGCCTGGATGAGGAGCCGGTCCTGGTACCGGTTCCTCAGCCTGACAAAGACCTGATGGACCTC GGTAATATCGAGCTGGTAAAGGACGTATCGATGCTGTGGAAACAGGAACAAAGTGGCTCCATTTCGGTCTCGAGC CAGATGAAATATCCAACGGTGAAGCTTGAAGAAATTGGCTTCATTGACAGCGTCAAATGCGATTCCAGCGCCAAC TCACTTCAGGTTGCCTTCAAGGATGACAAGGCATTCAAAACGGCCCAGGAGAAATGGCCGGCAGATGGACAGTTT CTCGTGGTCACGAATAACATGGGGAACTGTGACGATGAGACGGAGAGAGGTTTCTACTTTGCCGAGGCCGTAACG GCTGACGAAGGCTCTCGGAGACTCGACATCAAGGGAAAGAGGACTGAGCTCAAGGAGACAGCCGGTGAGGAGATG GATATAGTGATCGAAGAAATGAAGCCACAGCTCGCCAGGCGAGCGGAATTTTCGAAGACGATCGACGTCAAGTAC GACCTTCCGCAGCCAAAGGAAATATTCAACAAATGGAACACTTCCTTGACCGCGGAAAGCTTCCACATCGATGCG AGCCTGACGTTTTCGGGCAAGATCAAGATGAGCTGGTTCAAGGTGACGGAGTGCTGGTTCGACATGTCCGGCCAC GCAGCCCTGGACCTGGCCCTCAAGCTGCAGATCCAAGCGCAGTTCGAGAAGCAGGTCAGCACGAGCACGCCGCCC ATGACGTTCCCCATCGTGGCGATTCCCGGCATTATCGCCATCGGCCCGGCCGTCTCGGCGGGCATCGGCGTCGAC ATCACGGCCGTCGCGGCCATCTACGCCAGGGCCCATGCCTACCTCGCCTTCCCCGACGCCCAGTGGCGGGTCGAC CTCGTCAACAGCTCCAAGTCGATATCGAGGGGCCTCGAGCCGACCTACAACGCCAGCGTCCAGCTGGGCGGGTCG GCTTCGCTGATGGTCAACCCGTTCCTCGATCTGCGCTTCATGCTCAACGTCCAGATCCTGGCCGGGCTGGCCAAT CTTAACGGCGGCATCAAGATCGTGCCCAAATTCGCCAATACCTTCACCGTCGAGGCCCACGGCGGAGTCTGGAGC ACGCCCGGCACGACGCAGCCCGGGCCCGGTGCCGTGGAGCCGACGCCCGGCAAGACGACGTCGGAGGGCAAGGGC CAAGGCCGGAAGAGTCCGAACGGACTGGACTACGGCGACGGCAAGCCGAAGAAAGGACGCGGAGCGGCGAACTCG GTCAGGGGCTTGGTGAGACGCGCAAGCGGCACGTACGAGTTCTCCGAAAATCGGGAATCCAGCACGAAGCTTCCG GACGAGGGCAAGCAAGGGACGTACAGACCGCTCGAGGAAGACACTGTGAGCACAGAGGAAAGGCCACAGAAGGGC AAGAAGCCGAATGAAAGCAAGGAGCTCCCGGACCAGAGTCCGGAGGGCACAAACAGGCCGATCAACGAAGACGAC GCGGGCACAGAGAAAAAGCCACAGAAGGGCAAGAACGCGACGTCGAAGCCAAAGAAGGGCAAGAAGCCAAAAGAA AGCAAGGAGCTCCCGGACCAGGGCCCGGCGGGCACGCATAGGCCGATCAACGAAGACGACGTGGGCAAGGACGGC AAGGGACAGAAAGGCGGCGAGAGGGAGAAGAAAGAGAAGGAAAAGAAGAAAAAGACGCCAGAAGAGATCAAAAAG AAGAAGAAGGCCAAGGGCTCGGGGAAGCAGGCCACCGACGGTTCGTCAAAATGCCCCAACGGCCTCTCTCTCAAG AGCGACTTCCAGCTCCAAATCCTGGCCTTCATCTTGACCTACGAGACGTCCCTGTGGACGAAGCGGTGGCCGCTT TACGAGGGCTGTTATCAGCTGCCTCTGATTGGCGACGGGGAATAG |
| Transcript | >Hirsu2|2554 ATGTTGAAATGGCACTCATCACTCATTTTCATGCCCCTGGCACTGGTGGCGGCCCTAGAGCCCTGTTTAGATCTG GACGTATCGCAAGGCCTGGATGAGGAGCCGGTCCTGGTACCGGTTCCTCAGCCTGACAAAGACCTGATGGACCTC GGTAATATCGAGCTGGTAAAGGACGTATCGATGCTGTGGAAACAGGAACAAAGTGGCTCCATTTCGGTCTCGAGC CAGATGAAATATCCAACGGTGAAGCTTGAAGAAATTGGCTTCATTGACAGCGTCAAATGCGATTCCAGCGCCAAC TCACTTCAGGTTGCCTTCAAGGATGACAAGGCATTCAAAACGGCCCAGGAGAAATGGCCGGCAGATGGACAGTTT CTCGTGGTCACGAATAACATGGGGAACTGTGACGATGAGACGGAGAGAGGTTTCTACTTTGCCGAGGCCGTAACG GCTGACGAAGGCTCTCGGAGACTCGACATCAAGGGAAAGAGGACTGAGCTCAAGGAGACAGCCGGTGAGGAGATG GATATAGTGATCGAAGAAATGAAGCCACAGCTCGCCAGGCGAGCGGAATTTTCGAAGACGATCGACGTCAAGTAC GACCTTCCGCAGCCAAAGGAAATATTCAACAAATGGAACACTTCCTTGACCGCGGAAAGCTTCCACATCGATGCG AGCCTGACGTTTTCGGGCAAGATCAAGATGAGCTGGTTCAAGGTGACGGAGTGCTGGTTCGACATGTCCGGCCAC GCAGCCCTGGACCTGGCCCTCAAGCTGCAGATCCAAGCGCAGTTCGAGAAGCAGGTCAGCACGAGCACGCCGCCC ATGACGTTCCCCATCGTGGCGATTCCCGGCATTATCGCCATCGGCCCGGCCGTCTCGGCGGGCATCGGCGTCGAC ATCACGGCCGTCGCGGCCATCTACGCCAGGGCCCATGCCTACCTCGCCTTCCCCGACGCCCAGTGGCGGGTCGAC CTCGTCAACAGCTCCAAGTCGATATCGAGGGGCCTCGAGCCGACCTACAACGCCAGCGTCCAGCTGGGCGGGTCG GCTTCGCTGATGGTCAACCCGTTCCTCGATCTGCGCTTCATGCTCAACGTCCAGATCCTGGCCGGGCTGGCCAAT CTTAACGGCGGCATCAAGATCGTGCCCAAATTCGCCAATACCTTCACCGTCGAGGCCCACGGCGGAGTCTGGAGC ACGCCCGGCACGACGCAGCCCGGGCCCGGTGCCGTGGAGCCGACGCCCGGCAAGACGACGTCGGAGGGCAAGGGC CAAGGCCGGAAGAGTCCGAACGGACTGGACTACGGCGACGGCAAGCCGAAGAAAGGACGCGGAGCGGCGAACTCG GTCAGGGGCTTGGTGAGACGCGCAAGCGGCACGTACGAGTTCTCCGAAAATCGGGAATCCAGCACGAAGCTTCCG GACGAGGGCAAGCAAGGGACGTACAGACCGCTCGAGGAAGACACTGTGAGCACAGAGGAAAGGCCACAGAAGGGC AAGAAGCCGAATGAAAGCAAGGAGCTCCCGGACCAGAGTCCGGAGGGCACAAACAGGCCGATCAACGAAGACGAC GCGGGCACAGAGAAAAAGCCACAGAAGGGCAAGAACGCGACGTCGAAGCCAAAGAAGGGCAAGAAGCCAAAAGAA AGCAAGGAGCTCCCGGACCAGGGCCCGGCGGGCACGCATAGGCCGATCAACGAAGACGACGTGGGCAAGGACGGC AAGGGACAGAAAGGCGGCGAGAGGGAGAAGAAAGAGAAGGAAAAGAAGAAAAAGACGCCAGAAGAGATCAAAAAG AAGAAGAAGGCCAAGGGCTCGGGGAAGCAGGCCACCGACGGTTCGTCAAAATGCCCCAACGGCCTCTCTCTCAAG AGCGACTTCCAGCTCCAAATCCTGGCCTTCATCTTGACCTACGAGACGTCCCTGTGGACGAAGCGGTGGCCGCTT TACGAGGGCTGTTATCAGCTGCCTCTGATTGGCGACGGGGAATAG |
| Gene | >Hirsu2|2554 ATGTTGAAATGGCACTCATCACTCATTTTCATGCCCCTGGCACTGGTGGCGGCCCTAGAGCCCTGTTTAGATCTG GACGTATCGCAAGGCCTGGATGAGGAGCCGGTCCTGGTACCGGTTCCTCAGCCTGACAAAGACCTGATGGACCTC GGTAATATCGAGCTGGTAAAGGACGTATCGATGCTGTGGAAACAGGAACAAAGTGGCTCCATTTCGGTCTCGAGC CAGATGAAATATCCAACGGTGAAGCTTGAAGAAATTGGCTTCATTGACAGCGTCAAATGCGATTCCAGCGCCAAC TCACTTCAGGTTGCCTTCAAGGATGACAAGGCATTCAAAACGGCCCAGGAGAAATGGCCGGCAGATGGACAGTTT CTCGTGGTCACGAATAACATGGGGAACTGTGACGATGAGACGGAGAGAGGTTTCTACTTTGCCGAGGCCGTAACG GCTGACGAAGGCTCTCGGAGACTCGACATCAAGGGAAAGAGGACTGAGCTCAAGGAGACAGCCGGTGGTTCGTAC ACACGCGCCCGCCACAGATCGCTGCACAGCATGGTCTAACAATCAATGGCACAGAGGAGATGGATATAGTGATCG AAGAAATGAAGCCACAGCTCGCCAGGCGAGCGGAATTTTCGAAGACGATCGACGTCAAGTACGACCTTCCGCAGC CAAAGGAAATATTCAACAAATGGAACACTTCCTTGACCGCGGAAAGCTTCCACATCGATGCGAGCCTGACGTTTT CGGGCAAGATCAAGATGAGCTGGTTCAAGGTGACGGAGTGCTGGTTCGACATGTCCGGCCACGCAGCCCTGGACC TGGCCCTCAAGCTGCAGATCCAAGCGCAGTTCGAGAAGCAGGTCAGCACGAGCACGCCGCCCATGACGTTCCCCA TCGTGGCGATTCCCGGCATTATCGCCATCGGCCCGGCCGTCTCGGCGGGCATCGGCGTCGACATCACGGCCGTCG CGGCCATCTACGCCAGGGCCCATGCCTACCTCGCCTTCCCCGACGCCCAGTGGCGGGTCGACCTCGTCAACAGCT CCAAGTCGATATCGAGGGGCCTCGAGCCGACCTACAACGCCAGCGTCCAGCTGGGCGGGTCGGCTTCGCTGATGG TCAACCCGTTCCTCGATCTGCGCTTCATGCTCAACGTCCAGATCCTGGCCGGGCTGGCCAATCTTAACGGCGGCA TCAAGATCGTGCCCAAATTCGCCAATACCTTCACCGTCGAGGCCCACGGCGGAGTCTGGAGCACGCCCGGCACGA CGCAGCCCGGGCCCGGTGCCGTGGAGCCGACGCCCGGCAAGACGACGTCGGAGGGCAAGGGCCAAGGCCGGAAGA GTCCGAACGGACTGGACTACGGCGACGGCAAGCCGAAGAAAGGACGCGGAGCGGCGAACTCGGTCAGGGGCTTGG TGAGACGCGCAAGCGGCACGTACGAGTTCTCCGAAAATCGGGAATCCAGCACGAAGCTTCCGGACGAGGGCAAGC AAGGGACGTACAGACCGCTCGAGGAAGACACTGTGAGCACAGAGGAAAGGCCACAGAAGGGCAAGAAGCCGAATG AAAGCAAGGAGCTCCCGGACCAGAGTCCGGAGGGCACAAACAGGCCGATCAACGAAGACGACGCGGGCACAGAGA AAAAGCCACAGAAGGGCAAGAACGCGACGTCGAAGCCAAAGAAGGGCAAGAAGCCAAAAGAAAGCAAGGAGCTCC CGGACCAGGGCCCGGCGGGCACGCATAGGCCGATCAACGAAGACGACGTGGGCAAGGACGGCAAGGGACAGAAAG GCGGCGAGAGGGAGAAGAAAGAGAAGGAAAAGAAGAAAAAGACGCCAGAAGAGATCAAAAAGAAGAAGAAGGCCA AGGGCTCGGGGAAGCAGGCCACCGACGGTTCGTCAAAATGCCCCAACGGCCTCTCTCTCAAGAGCGACTTCCAGC TCCAAATCCTGGCCTTCATCTTGACCTACGAGACGTCCCTGTGGACGAAGCGGTGGCCGCTTTACGAGGGCTGTT ATCAGCTGCCTCTGATTGGCGACGGGGAATAG |