Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2546
Gene name
Location	Contig_161:2238..3462
Strand	-
Gene length (bp)	1224
Transcript length (bp)	1224
Coding sequence length (bp)	1224
Protein length (aa)	408

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04666	Glyco_transf_54	N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region	7.2E-15	73	228

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q812F8\|MGT4B_MOUSE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Mus musculus GN=Mgat4b PE=2 SV=1	53	229	8.0E-09
sp\|Q4R4A8\|MGT4C_MACFA	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Macaca fascicularis GN=MGAT4C PE=2 SV=1	77	254	2.0E-08
sp\|Q9D306\|MGT4C_MOUSE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Mus musculus GN=Mgat4c PE=2 SV=1	77	254	3.0E-08
sp\|Q9UBM8\|MGT4C_HUMAN	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Homo sapiens GN=MGAT4C PE=2 SV=2	77	254	3.0E-08
sp\|Q6ITT3\|MGT4C_PIG	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Sus scrofa GN=MGAT4C PE=2 SV=1	77	254	1.0E-07

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q812F8\|MGT4B_MOUSE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Mus musculus GN=Mgat4b PE=2 SV=1	53	229	8.0E-09
sp\|Q4R4A8\|MGT4C_MACFA	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Macaca fascicularis GN=MGAT4C PE=2 SV=1	77	254	2.0E-08
sp\|Q9D306\|MGT4C_MOUSE	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Mus musculus GN=Mgat4c PE=2 SV=1	77	254	3.0E-08
sp\|Q9UBM8\|MGT4C_HUMAN	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Homo sapiens GN=MGAT4C PE=2 SV=2	77	254	3.0E-08
sp\|Q6ITT3\|MGT4C_PIG	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C OS=Sus scrofa GN=MGAT4C PE=2 SV=1	77	254	1.0E-07
sp\|Q9UQ53\|MGT4B_HUMAN	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1	53	229	1.0E-07

[Show less]

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Endoplasmic reticulum\|Golgi apparatus	Signal peptide\|Transmembrane domain	0.1475	0.1187	0.3214	0.0957	0.0928	0.0048	0.7705	0.2642	0.8457	0.0068

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 27	0.980357

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GT109	1.4E-105	7	406

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	412
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|5049
Ophiocordyceps australis map64 (Brazil)	OphauB2\|3337
Ophiocordyceps camponoti-floridani	Ophcf2\|03901
Ophiocordyceps camponoti-rufipedis	Ophun1\|2659
Ophiocordyceps kimflemingae	Ophio5\|6737
Ophiocordyceps kimflemingae	Ophio5\|6868
Ophiocordyceps subramaniannii	Hirsu2\|2546 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|3977

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2546 MLPSVIQLLLAAVWLLLFRYCQIHSYADPTSYFFDEQRALALEYTAVREREAEDFLEFAATATRNDTGVGVPTSN RICLGIPSVRREREQFFARTIASLVDSIGAQERQLLYIVVLLADEDPQLNPAYGQQWVDYIADEVLVYADPAGPP GGSSRYRRLEAKQAALTRDQHMRLDYANLMDACVARDSDYFVLLEDDVMTSRDWLARLRGALAQMAAATGRRDWL YLRLFHAEMYLGWNAEEWPSYLAHALVVYLAAGTVALLLRRRATGGAPLRLVKAGRLQSRPLMALLRFNFWFCAF TLLYFKAGRITVGRYGEGVHEMDKYGCCAQGLAFPSRHLQTLSSAFRATERDLPVDSLIEAVADERGLGRWMMVP SVLQHVGARGSSAAGGSLKTTLNYSFERQHSS*
Coding	>Hirsu2\|2546 ATGCTCCCGTCCGTGATCCAGCTCTTGCTGGCCGCAGTCTGGCTCTTACTGTTCCGTTACTGCCAGATTCACTCG TACGCCGATCCGACCTCGTACTTCTTCGACGAACAGCGCGCCTTGGCCCTCGAATACACGGCGGTACGGGAACGG GAAGCGGAGGATTTCCTCGAATTCGCCGCGACGGCGACTCGGAACGACACGGGCGTCGGCGTGCCGACGTCCAAC CGCATCTGCCTCGGCATACCGAGCGTCCGGAGAGAGAGGGAGCAGTTCTTCGCGCGGACGATTGCTTCGCTGGTC GACTCGATAGGCGCCCAAGAGCGACAGCTGCTGTACATCGTCGTCTTGCTGGCGGACGAGGACCCGCAGCTGAAC CCGGCCTACGGCCAGCAATGGGTCGACTACATCGCCGACGAGGTCTTGGTCTACGCGGACCCGGCAGGCCCGCCG GGCGGTAGCAGCCGCTATCGTCGGCTCGAGGCCAAGCAGGCGGCGCTGACGCGAGACCAGCACATGCGGCTCGAC TACGCGAACCTGATGGACGCCTGCGTCGCGCGCGACTCCGACTACTTCGTCCTGCTCGAGGACGACGTCATGACC TCGAGGGACTGGCTGGCGCGGCTGCGCGGCGCGCTCGCGCAGATGGCCGCCGCGACCGGGCGCAGGGACTGGCTG TATCTGCGGCTGTTCCACGCCGAGATGTACCTCGGCTGGAACGCGGAGGAGTGGCCGTCGTACCTGGCGCACGCC CTGGTGGTCTATCTGGCCGCCGGCACCGTGGCGCTGCTCCTGCGGCGGCGGGCGACCGGGGGAGCGCCCTTGCGG CTCGTCAAGGCCGGCCGGCTGCAGTCGCGGCCGCTGATGGCGCTGCTGCGCTTCAACTTCTGGTTCTGCGCCTTC ACCCTCCTCTACTTCAAGGCCGGCCGGATCACGGTCGGTCGGTACGGCGAGGGCGTGCACGAGATGGACAAGTAC GGCTGCTGCGCGCAGGGACTGGCCTTCCCGAGCCGGCACCTGCAGACGCTGAGCTCGGCCTTCCGGGCGACCGAG CGCGATCTCCCGGTCGACTCGCTGATCGAGGCCGTCGCGGACGAAAGGGGCCTCGGCAGGTGGATGATGGTCCCC AGCGTGCTGCAGCACGTCGGTGCCAGGGGCTCATCTGCCGCGGGCGGGAGCCTGAAGACGACGCTGAACTACAGC TTCGAGAGGCAGCATTCGAGCTGA
Transcript	>Hirsu2\|2546 ATGCTCCCGTCCGTGATCCAGCTCTTGCTGGCCGCAGTCTGGCTCTTACTGTTCCGTTACTGCCAGATTCACTCG TACGCCGATCCGACCTCGTACTTCTTCGACGAACAGCGCGCCTTGGCCCTCGAATACACGGCGGTACGGGAACGG GAAGCGGAGGATTTCCTCGAATTCGCCGCGACGGCGACTCGGAACGACACGGGCGTCGGCGTGCCGACGTCCAAC CGCATCTGCCTCGGCATACCGAGCGTCCGGAGAGAGAGGGAGCAGTTCTTCGCGCGGACGATTGCTTCGCTGGTC GACTCGATAGGCGCCCAAGAGCGACAGCTGCTGTACATCGTCGTCTTGCTGGCGGACGAGGACCCGCAGCTGAAC CCGGCCTACGGCCAGCAATGGGTCGACTACATCGCCGACGAGGTCTTGGTCTACGCGGACCCGGCAGGCCCGCCG GGCGGTAGCAGCCGCTATCGTCGGCTCGAGGCCAAGCAGGCGGCGCTGACGCGAGACCAGCACATGCGGCTCGAC TACGCGAACCTGATGGACGCCTGCGTCGCGCGCGACTCCGACTACTTCGTCCTGCTCGAGGACGACGTCATGACC TCGAGGGACTGGCTGGCGCGGCTGCGCGGCGCGCTCGCGCAGATGGCCGCCGCGACCGGGCGCAGGGACTGGCTG TATCTGCGGCTGTTCCACGCCGAGATGTACCTCGGCTGGAACGCGGAGGAGTGGCCGTCGTACCTGGCGCACGCC CTGGTGGTCTATCTGGCCGCCGGCACCGTGGCGCTGCTCCTGCGGCGGCGGGCGACCGGGGGAGCGCCCTTGCGG CTCGTCAAGGCCGGCCGGCTGCAGTCGCGGCCGCTGATGGCGCTGCTGCGCTTCAACTTCTGGTTCTGCGCCTTC ACCCTCCTCTACTTCAAGGCCGGCCGGATCACGGTCGGTCGGTACGGCGAGGGCGTGCACGAGATGGACAAGTAC GGCTGCTGCGCGCAGGGACTGGCCTTCCCGAGCCGGCACCTGCAGACGCTGAGCTCGGCCTTCCGGGCGACCGAG CGCGATCTCCCGGTCGACTCGCTGATCGAGGCCGTCGCGGACGAAAGGGGCCTCGGCAGGTGGATGATGGTCCCC AGCGTGCTGCAGCACGTCGGTGCCAGGGGCTCATCTGCCGCGGGCGGGAGCCTGAAGACGACGCTGAACTACAGC TTCGAGAGGCAGCATTCGAGCTGA
Gene	>Hirsu2\|2546 ATGCTCCCGTCCGTGATCCAGCTCTTGCTGGCCGCAGTCTGGCTCTTACTGTTCCGTTACTGCCAGATTCACTCG TACGCCGATCCGACCTCGTACTTCTTCGACGAACAGCGCGCCTTGGCCCTCGAATACACGGCGGTACGGGAACGG GAAGCGGAGGATTTCCTCGAATTCGCCGCGACGGCGACTCGGAACGACACGGGCGTCGGCGTGCCGACGTCCAAC CGCATCTGCCTCGGCATACCGAGCGTCCGGAGAGAGAGGGAGCAGTTCTTCGCGCGGACGATTGCTTCGCTGGTC GACTCGATAGGCGCCCAAGAGCGACAGCTGCTGTACATCGTCGTCTTGCTGGCGGACGAGGACCCGCAGCTGAAC CCGGCCTACGGCCAGCAATGGGTCGACTACATCGCCGACGAGGTCTTGGTCTACGCGGACCCGGCAGGCCCGCCG GGCGGTAGCAGCCGCTATCGTCGGCTCGAGGCCAAGCAGGCGGCGCTGACGCGAGACCAGCACATGCGGCTCGAC TACGCGAACCTGATGGACGCCTGCGTCGCGCGCGACTCCGACTACTTCGTCCTGCTCGAGGACGACGTCATGACC TCGAGGGACTGGCTGGCGCGGCTGCGCGGCGCGCTCGCGCAGATGGCCGCCGCGACCGGGCGCAGGGACTGGCTG TATCTGCGGCTGTTCCACGCCGAGATGTACCTCGGCTGGAACGCGGAGGAGTGGCCGTCGTACCTGGCGCACGCC CTGGTGGTCTATCTGGCCGCCGGCACCGTGGCGCTGCTCCTGCGGCGGCGGGCGACCGGGGGAGCGCCCTTGCGG CTCGTCAAGGCCGGCCGGCTGCAGTCGCGGCCGCTGATGGCGCTGCTGCGCTTCAACTTCTGGTTCTGCGCCTTC ACCCTCCTCTACTTCAAGGCCGGCCGGATCACGGTCGGTCGGTACGGCGAGGGCGTGCACGAGATGGACAAGTAC GGCTGCTGCGCGCAGGGACTGGCCTTCCCGAGCCGGCACCTGCAGACGCTGAGCTCGGCCTTCCGGGCGACCGAG CGCGATCTCCCGGTCGACTCGCTGATCGAGGCCGTCGCGGACGAAAGGGGCCTCGGCAGGTGGATGATGGTCCCC AGCGTGCTGCAGCACGTCGGTGCCAGGGGCTCATCTGCCGCGGGCGGGAGCCTGAAGACGACGCTGAACTACAGC TTCGAGAGGCAGCATTCGAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail