Protein ID | Hirsu2|2544 |
Gene name | |
Location | Contig_1609:1395..3571 |
Strand | - |
Gene length (bp) | 2176 |
Transcript length (bp) | 1935 |
Coding sequence length (bp) | 1935 |
Protein length (aa) | 645 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 571 | 590 | 19 |
2 | 621 | 643 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2544 MSHHQQEDDRAASEWETVAGDDDFVVPIEMVPLPPRQLRASPSTDDGPAYETGHSLPPRTLLRQRPAAVGPHENA PGELKTSCSKSSSSVSADRFKRAPLRAGTAIEMQPPAGPSPKRMRVEPDGVRGENPEEAPATMHAISFDTDGAAH ALARARMTALDTDTDWQTVTTEQPPEPIREIELNFAKGAGSSLADVSDASEDITDQARHRSTDGVLGKTFSPRES TSDLFGLKQLIKRSQRDRSRSRMASTDSCQREALKMPQIPPRAAQAKRRVSNPFRLESIVVKREKSSTVFEMKPL RNSYESLDSEPPLRGDADRQRREGEFGWSPDQNSPKEAFPNALSTAIEKQPHGPAASQTGGDRCEGLPGRDGPSH DVSRLPFPLISLPEAARLQSFRRERGQEDHTDSPGFFAAKARSVRSGTVSTLSSVNSPVTPLSAFIDWQARASAT EPVRPATAHRSRRVRERPTLSVDTTDSLLYRISTGRDKAGPWAGYRDASGARASRGSASVLDARVHRLRGFSSST RQRSGDRPRDSFELLCRSEMGLFRPAQDDVLLGLDFSHKDGSSDRVFVGIVAVTLLFPLVGLVALCGRFDSAISW CSQGQVHSLSTKQRSILKRQLLAEAVVYPVLITMLSVHYSVRGP* |
Coding | >Hirsu2|2544 ATGTCGCACCACCAGCAGGAAGACGACAGGGCCGCTTCCGAATGGGAGACGGTGGCGGGGGACGACGACTTTGTC GTCCCGATAGAAATGGTTCCTTTGCCGCCAAGACAGCTGCGAGCCTCTCCGTCGACAGATGATGGACCGGCGTAC GAAACAGGCCACAGCCTCCCGCCGCGGACTCTGCTCCGCCAGCGACCGGCGGCTGTGGGCCCTCACGAAAACGCT CCCGGTGAGCTCAAGACCAGCTGCTCCAAGTCGTCGAGCAGCGTGAGCGCCGACCGGTTCAAGAGAGCTCCCCTT CGCGCCGGAACGGCCATCGAGATGCAGCCTCCCGCCGGGCCATCACCCAAGAGAATGAGGGTCGAGCCAGACGGC GTGAGAGGAGAGAACCCTGAAGAGGCTCCGGCCACGATGCACGCCATTTCCTTCGACACCGACGGCGCGGCACAC GCTCTGGCGCGCGCCCGCATGACAGCCCTCGACACCGACACAGACTGGCAGACCGTGACGACGGAGCAGCCCCCG GAGCCCATCCGAGAAATCGAGCTCAACTTTGCCAAGGGTGCCGGCAGCAGTCTCGCCGACGTGTCCGATGCGTCG GAGGATATCACGGATCAGGCAAGGCACAGGTCGACCGATGGCGTCTTGGGCAAGACCTTCAGCCCCCGCGAGTCG ACCTCGGATCTGTTCGGCCTCAAGCAGCTGATCAAGCGCAGCCAACGTGACAGATCGCGCAGCAGGATGGCATCG ACCGACAGCTGCCAGCGTGAGGCTCTCAAGATGCCCCAAATCCCCCCTCGTGCGGCCCAGGCAAAACGTCGAGTC TCCAACCCGTTTCGCCTCGAAAGCATCGTTGTGAAGAGGGAGAAATCCAGCACCGTCTTTGAGATGAAGCCCCTC CGCAACAGCTACGAAAGCCTGGACTCGGAGCCTCCTCTGCGCGGCGACGCCGACCGACAGCGAAGGGAAGGAGAG TTTGGCTGGTCCCCCGACCAGAACAGCCCGAAAGAGGCCTTCCCCAACGCCCTGTCTACCGCGATCGAGAAGCAG CCGCATGGGCCAGCGGCCAGCCAAACGGGTGGCGACCGCTGCGAGGGTCTCCCGGGGCGCGACGGGCCCTCCCAC GACGTTTCGCGACTGCCATTCCCCCTCATCAGTCTCCCCGAAGCAGCGAGGCTCCAGTCATTCCGCAGAGAGCGA GGGCAGGAAGACCATACAGACTCCCCCGGCTTCTTTGCAGCCAAGGCACGGTCGGTGAGATCCGGGACCGTCAGC ACCCTATCATCCGTCAACAGCCCCGTCACGCCGCTGTCTGCCTTTATCGACTGGCAGGCGCGCGCCTCTGCGACG GAACCGGTGAGGCCTGCGACGGCACACCGGAGCCGCCGCGTTCGAGAGCGGCCCACCTTGAGCGTGGACACCACG GACAGCCTCCTATACCGCATCTCGACTGGCCGGGACAAGGCGGGGCCCTGGGCGGGATATCGGGATGCAAGCGGA GCTCGTGCGAGCCGCGGCAGCGCGTCCGTCCTCGATGCCAGGGTGCACCGGCTCCGAGGCTTCTCATCGAGCACG AGGCAGAGGAGCGGCGACCGGCCGCGCGACAGCTTTGAACTTTTGTGCCGTTCGGAGATGGGACTGTTCCGCCCG GCCCAGGACGATGTGCTCTTGGGTCTCGACTTTTCCCACAAAGACGGGTCATCGGACCGGGTTTTCGTCGGCATC GTGGCCGTAACCCTGCTGTTCCCCCTTGTCGGGCTCGTTGCGCTCTGCGGCCGGTTCGACTCGGCAATCTCGTGG TGCTCGCAGGGCCAGGTGCACTCGCTCTCGACCAAGCAGCGATCTATCCTGAAGCGACAGCTGCTGGCGGAGGCG GTGGTGTATCCCGTCCTGATTACCATGCTGTCGGTCCACTACTCCGTGCGCGGCCCGTGA |
Transcript | >Hirsu2|2544 ATGTCGCACCACCAGCAGGAAGACGACAGGGCCGCTTCCGAATGGGAGACGGTGGCGGGGGACGACGACTTTGTC GTCCCGATAGAAATGGTTCCTTTGCCGCCAAGACAGCTGCGAGCCTCTCCGTCGACAGATGATGGACCGGCGTAC GAAACAGGCCACAGCCTCCCGCCGCGGACTCTGCTCCGCCAGCGACCGGCGGCTGTGGGCCCTCACGAAAACGCT CCCGGTGAGCTCAAGACCAGCTGCTCCAAGTCGTCGAGCAGCGTGAGCGCCGACCGGTTCAAGAGAGCTCCCCTT CGCGCCGGAACGGCCATCGAGATGCAGCCTCCCGCCGGGCCATCACCCAAGAGAATGAGGGTCGAGCCAGACGGC GTGAGAGGAGAGAACCCTGAAGAGGCTCCGGCCACGATGCACGCCATTTCCTTCGACACCGACGGCGCGGCACAC GCTCTGGCGCGCGCCCGCATGACAGCCCTCGACACCGACACAGACTGGCAGACCGTGACGACGGAGCAGCCCCCG GAGCCCATCCGAGAAATCGAGCTCAACTTTGCCAAGGGTGCCGGCAGCAGTCTCGCCGACGTGTCCGATGCGTCG GAGGATATCACGGATCAGGCAAGGCACAGGTCGACCGATGGCGTCTTGGGCAAGACCTTCAGCCCCCGCGAGTCG ACCTCGGATCTGTTCGGCCTCAAGCAGCTGATCAAGCGCAGCCAACGTGACAGATCGCGCAGCAGGATGGCATCG ACCGACAGCTGCCAGCGTGAGGCTCTCAAGATGCCCCAAATCCCCCCTCGTGCGGCCCAGGCAAAACGTCGAGTC TCCAACCCGTTTCGCCTCGAAAGCATCGTTGTGAAGAGGGAGAAATCCAGCACCGTCTTTGAGATGAAGCCCCTC CGCAACAGCTACGAAAGCCTGGACTCGGAGCCTCCTCTGCGCGGCGACGCCGACCGACAGCGAAGGGAAGGAGAG TTTGGCTGGTCCCCCGACCAGAACAGCCCGAAAGAGGCCTTCCCCAACGCCCTGTCTACCGCGATCGAGAAGCAG CCGCATGGGCCAGCGGCCAGCCAAACGGGTGGCGACCGCTGCGAGGGTCTCCCGGGGCGCGACGGGCCCTCCCAC GACGTTTCGCGACTGCCATTCCCCCTCATCAGTCTCCCCGAAGCAGCGAGGCTCCAGTCATTCCGCAGAGAGCGA GGGCAGGAAGACCATACAGACTCCCCCGGCTTCTTTGCAGCCAAGGCACGGTCGGTGAGATCCGGGACCGTCAGC ACCCTATCATCCGTCAACAGCCCCGTCACGCCGCTGTCTGCCTTTATCGACTGGCAGGCGCGCGCCTCTGCGACG GAACCGGTGAGGCCTGCGACGGCACACCGGAGCCGCCGCGTTCGAGAGCGGCCCACCTTGAGCGTGGACACCACG GACAGCCTCCTATACCGCATCTCGACTGGCCGGGACAAGGCGGGGCCCTGGGCGGGATATCGGGATGCAAGCGGA GCTCGTGCGAGCCGCGGCAGCGCGTCCGTCCTCGATGCCAGGGTGCACCGGCTCCGAGGCTTCTCATCGAGCACG AGGCAGAGGAGCGGCGACCGGCCGCGCGACAGCTTTGAACTTTTGTGCCGTTCGGAGATGGGACTGTTCCGCCCG GCCCAGGACGATGTGCTCTTGGGTCTCGACTTTTCCCACAAAGACGGGTCATCGGACCGGGTTTTCGTCGGCATC GTGGCCGTAACCCTGCTGTTCCCCCTTGTCGGGCTCGTTGCGCTCTGCGGCCGGTTCGACTCGGCAATCTCGTGG TGCTCGCAGGGCCAGGTGCACTCGCTCTCGACCAAGCAGCGATCTATCCTGAAGCGACAGCTGCTGGCGGAGGCG GTGGTGTATCCCGTCCTGATTACCATGCTGTCGGTCCACTACTCCGTGCGCGGCCCGTGA |
Gene | >Hirsu2|2544 ATGTCGCACCACCAGCAGGAAGACGACAGGGCCGCTTCCGAATGGGAGACGGTGGCGGGGGACGACGACTTTGTC GTCCCGATAGAAATGGTTCCTTTGCCGCCAAGACAGCTGCGAGCCTCTCCGTCGACAGATGATGGACCGGCGTAC GAAACAGGCCACAGCCTCCCGCCGCGGACTCTGCTCCGCCAGCGACCGGCGGCTGTGGGCCCTCACGAAAACGCT CCCGGTGAGCTCAAGACCAGCTGCTCCAAGTCGTCGAGCAGCGTGAGCGCCGACCGGTTCAAGTATGATGCAGGA CACTACCCGTTCTTGATGTCATCAACTGAGCGAGGGGTCAGGAGAGCTCCCCTTCGCGCCGGAACGGCCATCGAG ATGCAGCCTCCCGCCGGGCCATCACCCAAGAGAATGAGGGTCGAGCCAGACGGCGTGAGAGGTGAGAGCGATGTG ACATTCTACAATCCTGCAGCCATTCGATCGACCTAGAAGGTCGACAGTGCGGTCAAGATTCCGGTCACACGAGAG AACGTCAGAGGGGCGGCGGCCATAGGAGAGAACCCTGAAGAGGCTCCGGCCACGATGCACGCCATTTCCTTCGAC ACCGACGGCGCGGCACACGCTCTGGCGCGCGCCCGCATGACAGCCCTCGACACCGACACAGACTGGCAGACCGTG ACGACGGAGCAGCCCCCGGAGCCCATCCGAGAAATCGAGCTCAACTTTGCCAAGGGTGCCGGCAGCAGTCTCGCC GACGTGTCCGATGCGTCGGAGGATATCACGGATCAGGCAAGGCACAGGTCGACCGATGGCGTCTTGGGCAAGACC TTCAGCCCCCGCGAGTCGACCTCGGATCTGTTCGGCCTCAAGCAGCTGATCAAGCGCAGCCAACGTGACAGATCG CGCAGCAGGATGGCATCGACCGACAGCTGCCAGCGTGAGGCTCTCAAGATGCCCCAAATCCCCCCTCGTGCGGCC CAGGCAAAACGTCGAGTCTCCAACCCGTTTCGCCTCGAAAGCATCGTTGTGAAGAGGGAGAAATCCAGCACCGTC TTTGAGATGAAGCCCCTCCGCAACAGCTACGAAAGCCTGGACTCGGAGCCTCCTCTGCGCGGCGACGCCGACCGA CAGCGAAGGGAAGGAGAGTTTGGCTGGTCCCCCGACCAGAACAGCCCGAAAGAGGCCTTCCCCAACGCCCTGTCT ACCGCGATCGAGAAGCAGCCGCATGGGCCAGCGGCCAGCCAAACGGGTGGCGACCGCTGCGAGGGTCTCCCGGGG CGCGACGGGCCCTCCCACGACGTTTCGCGACTGCCATTCCCCCTCATCAGTCTCCCCGAAGCAGCGAGGCTCCAG TCATTCCGCAGAGAGCGAGGGCAGGAAGACCATACAGACTCCCCCGGCTTCTTTGCAGCCAAGGCACGGTCGGTG AGATCCGGGACCGTCAGCACCCTATCATCCGTCAACAGCCCCGTCACGCCGCTGTCTGCCTTTATCGACTGGCAG GCGCGCGCCTCTGCGACGGAACCGGTGAGGCCTGCGACGGCACACCGGAGCCGCCGCGTTCGAGAGCGGCCCACC TGTACGTCACCGCTGTGCACACACACACACACACACAAGCACATCGAGAGCCCTCGAGAACTGACCGATCACAGT GAGCGTGGACACCACGGACAGCCTCCTATACCGCATCTCGACTGGCCGGGACAAGGCGGGGCCCTGGGCGGGATA TCGGGATGCAAGCGGAGCTCGTGCGAGCCGCGGCAGCGCGTCCGTCCTCGATGCCAGGGTGCACCGGCTCCGAGG CTTCTCATCGAGCACGAGGCAGAGGAGCGGCGACCGGCCGCGCGACAGCTTTGAACTTTTGTGCCGTTCGGAGAT GGGACTGTTCCGCCCGGCCCAGGACGATGTGCTCTTGGGTCTCGACTTTTCCCACAAAGACGGGTCATCGGACCG GGTTTTCGTCGGCATCGTGGCCGTAACCCTGCTGTTCCCCCTTGTCGGGCTCGTTGCGCTCTGCGGCCGGTTCGA CTCGGCAATCTCGTGGTGCTCGCAGGGCCAGGTGCACTCGCTCTCGACCAAGCAGCGATCTATCCTGAAGCGACA GCTGCTGGCGGAGGCGGTGGTGTATCCCGTCCTGATTACCATGCTGTCGGTCCACTACTCCGTGCGCGGCCCGTG A |