Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2540
Gene name
LocationContig_1607:1827..3812
Strand-
Gene length (bp)1985
Transcript length (bp)1914
Coding sequence length (bp)1914
Protein length (aa) 638

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05686 Glyco_transf_90 Glycosyl transferase family 90 1.4E-12 495 612

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5K8R6|CXT1_CRYNJ Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CXT1 PE=1 SV=1 50 617 2.0E-43
sp|Q6UW63|KDEL1_HUMAN KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1 500 611 5.0E-10
sp|Q9JHP7|KDEL1_MOUSE KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1 500 611 4.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 17 34 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2540
MVKILSPGSFRRRPSSFSRYVVLAILFLAAFYSFKYSSHELYTNPSNLRRPSSDDPLSPGDSRPDTAPPSTGPDT
HGHPIDKLIYDAQHTFAELISKESKTVDEAAQAYRQRRQRHPPPGFDKWFDFARAHGALVVEDFFDQIHHDLEPF
WGANPLDMRRRASQFEMTINIRNGTASAGSDWFWTQIWLKLIKKIEVFLPDMDLALNAMDEPRIVVPWENINEHV
SKAARTRKLKKPKSVVSEFQSLPQPRTEELSVKTPDIEWEETKPYWVIARRGCPPDSPARKAPLRESFAEPPVIS
TEHARPHLYEGYVANFTMSNEICHQPDLQGLQGALIEPITTKATDVMFPMFGGSKLTINNEILLPAPMYWNEEER
FTGGDDHGVPWADKSNSTVWRGVATGGKNHESNWRGFQRHRFVAMCNGTKVGLVESGQQKAENFALPDGQYNVSA
QRDQRLADWINQFSDVGFTDLFCDPPNDGWCSYTDFYFEPQPGLKMVEQFSSKFLPDIDGNSFSGRYLGFLRSTS
LPIKATIWREWHDSRLVPWKHFVPMDNRFSDLYGIMDYFLGYDGRNDHDAEAEKIASAGKEWAERVLRKEDMLVY
VMRLLLEYARVIDDNREAMGWVDDAVRNPALAKKWQR*
Coding >Hirsu2|2540
ATGGTCAAGATACTGTCTCCTGGCTCCTTCCGACGACGCCCCTCGAGCTTCAGCCGATATGTTGTCCTAGCCATC
CTCTTCCTCGCCGCCTTCTATTCTTTCAAATACAGCTCCCACGAGTTATACACCAATCCCTCGAACCTCCGTCGC
CCCTCGTCCGACGACCCCCTGAGCCCCGGCGACTCGCGACCCGACACGGCCCCCCCCTCGACCGGCCCCGATACA
CATGGCCACCCCATCGACAAGTTAATCTACGACGCTCAGCATACCTTTGCCGAGCTCATCTCCAAGGAATCCAAG
ACGGTCGACGAGGCTGCCCAGGCCTATCGTCAGCGCCGTCAGCGCCACCCTCCTCCCGGTTTCGATAAATGGTTC
GACTTCGCGCGCGCACACGGCGCCCTCGTCGTCGAGGACTTCTTCGACCAAATCCACCATGACCTTGAGCCTTTT
TGGGGCGCCAACCCCCTCGACATGCGCCGGCGAGCAAGCCAGTTCGAGATGACCATCAACATTCGAAACGGCACC
GCATCGGCAGGCTCGGACTGGTTTTGGACGCAGATATGGCTCAAATTGATCAAGAAGATTGAAGTCTTTCTTCCC
GACATGGACTTGGCCCTCAACGCCATGGACGAGCCACGCATCGTCGTTCCCTGGGAGAATATAAACGAGCATGTC
AGCAAGGCGGCCCGGACGCGCAAGCTGAAGAAGCCCAAGTCGGTCGTGTCCGAGTTCCAGAGCCTGCCGCAGCCG
AGAACGGAGGAGTTGAGCGTCAAGACTCCCGACATAGAGTGGGAGGAAACAAAACCCTACTGGGTCATTGCCCGC
CGTGGCTGCCCCCCCGACAGTCCGGCTCGGAAGGCCCCTCTGCGGGAGTCGTTTGCCGAGCCTCCCGTCATCAGC
ACCGAGCATGCCCGACCACATCTCTACGAGGGCTACGTCGCCAACTTCACCATGTCCAACGAGATCTGCCACCAG
CCCGACCTCCAGGGCCTCCAGGGCGCCCTCATCGAACCCATCACGACCAAGGCGACCGACGTCATGTTTCCCATG
TTTGGCGGCTCCAAGCTGACCATCAATAACGAGATACTCCTGCCGGCGCCCATGTACTGGAACGAAGAGGAGCGC
TTCACCGGCGGCGACGACCACGGCGTTCCTTGGGCGGACAAGAGCAACAGCACCGTCTGGCGCGGCGTCGCCACC
GGAGGCAAGAACCATGAAAGCAACTGGAGGGGGTTCCAGCGCCACCGCTTCGTCGCCATGTGCAACGGGACCAAG
GTCGGGCTGGTGGAGTCGGGCCAGCAGAAGGCGGAAAACTTCGCCTTGCCCGACGGCCAGTACAATGTGAGCGCG
CAGAGGGATCAAAGGCTCGCGGACTGGATCAATCAGTTCTCCGACGTCGGCTTCACCGACCTCTTCTGTGACCCC
CCGAACGACGGATGGTGCAGCTACACCGACTTCTATTTCGAGCCCCAGCCCGGGTTGAAGATGGTGGAGCAGTTT
AGCTCCAAGTTCCTGCCCGACATCGACGGCAACTCCTTTTCCGGCCGCTACCTGGGCTTCCTGCGGTCGACGTCA
CTACCCATCAAGGCCACCATCTGGCGGGAGTGGCACGACAGCCGTCTGGTGCCGTGGAAGCACTTTGTTCCCATG
GACAACCGCTTCTCCGACTTGTACGGCATCATGGACTACTTCCTCGGCTACGACGGCCGCAACGACCACGACGCC
GAGGCCGAGAAGATTGCGTCCGCCGGCAAGGAGTGGGCGGAGCGGGTCCTGCGCAAGGAGGACATGCTCGTCTAC
GTCATGCGGTTGCTGCTCGAGTACGCACGCGTCATCGACGACAACCGCGAGGCGATGGGATGGGTCGACGACGCG
GTCAGGAACCCTGCCCTGGCGAAGAAGTGGCAGCGTTGA
Transcript >Hirsu2|2540
ATGGTCAAGATACTGTCTCCTGGCTCCTTCCGACGACGCCCCTCGAGCTTCAGCCGATATGTTGTCCTAGCCATC
CTCTTCCTCGCCGCCTTCTATTCTTTCAAATACAGCTCCCACGAGTTATACACCAATCCCTCGAACCTCCGTCGC
CCCTCGTCCGACGACCCCCTGAGCCCCGGCGACTCGCGACCCGACACGGCCCCCCCCTCGACCGGCCCCGATACA
CATGGCCACCCCATCGACAAGTTAATCTACGACGCTCAGCATACCTTTGCCGAGCTCATCTCCAAGGAATCCAAG
ACGGTCGACGAGGCTGCCCAGGCCTATCGTCAGCGCCGTCAGCGCCACCCTCCTCCCGGTTTCGATAAATGGTTC
GACTTCGCGCGCGCACACGGCGCCCTCGTCGTCGAGGACTTCTTCGACCAAATCCACCATGACCTTGAGCCTTTT
TGGGGCGCCAACCCCCTCGACATGCGCCGGCGAGCAAGCCAGTTCGAGATGACCATCAACATTCGAAACGGCACC
GCATCGGCAGGCTCGGACTGGTTTTGGACGCAGATATGGCTCAAATTGATCAAGAAGATTGAAGTCTTTCTTCCC
GACATGGACTTGGCCCTCAACGCCATGGACGAGCCACGCATCGTCGTTCCCTGGGAGAATATAAACGAGCATGTC
AGCAAGGCGGCCCGGACGCGCAAGCTGAAGAAGCCCAAGTCGGTCGTGTCCGAGTTCCAGAGCCTGCCGCAGCCG
AGAACGGAGGAGTTGAGCGTCAAGACTCCCGACATAGAGTGGGAGGAAACAAAACCCTACTGGGTCATTGCCCGC
CGTGGCTGCCCCCCCGACAGTCCGGCTCGGAAGGCCCCTCTGCGGGAGTCGTTTGCCGAGCCTCCCGTCATCAGC
ACCGAGCATGCCCGACCACATCTCTACGAGGGCTACGTCGCCAACTTCACCATGTCCAACGAGATCTGCCACCAG
CCCGACCTCCAGGGCCTCCAGGGCGCCCTCATCGAACCCATCACGACCAAGGCGACCGACGTCATGTTTCCCATG
TTTGGCGGCTCCAAGCTGACCATCAATAACGAGATACTCCTGCCGGCGCCCATGTACTGGAACGAAGAGGAGCGC
TTCACCGGCGGCGACGACCACGGCGTTCCTTGGGCGGACAAGAGCAACAGCACCGTCTGGCGCGGCGTCGCCACC
GGAGGCAAGAACCATGAAAGCAACTGGAGGGGGTTCCAGCGCCACCGCTTCGTCGCCATGTGCAACGGGACCAAG
GTCGGGCTGGTGGAGTCGGGCCAGCAGAAGGCGGAAAACTTCGCCTTGCCCGACGGCCAGTACAATGTGAGCGCG
CAGAGGGATCAAAGGCTCGCGGACTGGATCAATCAGTTCTCCGACGTCGGCTTCACCGACCTCTTCTGTGACCCC
CCGAACGACGGATGGTGCAGCTACACCGACTTCTATTTCGAGCCCCAGCCCGGGTTGAAGATGGTGGAGCAGTTT
AGCTCCAAGTTCCTGCCCGACATCGACGGCAACTCCTTTTCCGGCCGCTACCTGGGCTTCCTGCGGTCGACGTCA
CTACCCATCAAGGCCACCATCTGGCGGGAGTGGCACGACAGCCGTCTGGTGCCGTGGAAGCACTTTGTTCCCATG
GACAACCGCTTCTCCGACTTGTACGGCATCATGGACTACTTCCTCGGCTACGACGGCCGCAACGACCACGACGCC
GAGGCCGAGAAGATTGCGTCCGCCGGCAAGGAGTGGGCGGAGCGGGTCCTGCGCAAGGAGGACATGCTCGTCTAC
GTCATGCGGTTGCTGCTCGAGTACGCACGCGTCATCGACGACAACCGCGAGGCGATGGGATGGGTCGACGACGCG
GTCAGGAACCCTGCCCTGGCGAAGAAGTGGCAGCGTTGA
Gene >Hirsu2|2540
ATGGTCAAGATACTGTCTCCTGGCTCCTTCCGACGACGCCCCTCGAGCTTCAGCCGATATGTTGTCCTAGCCATC
CTCTTCCTCGCCGCCTTCTATTCTTTCAAATACAGCTCCCACGAGTTATACACCAATCCCTCGAACCTCCGTCGC
CCCTCGTCCGACGACCCCCTGAGCCCCGGCGACTCGCGACCCGACACGGCCCCCCCCTCGACCGGCCCCGATACA
CATGGCCACCCCATCGACAAGTTAATCTACGACGCTCAGCATACCTTTGCCGAGCTCATCTCCAAGGAATCCAAG
ACGGTCGACGAGGCTGCCCAGGCCTATCGTCAGCGCCGTCAGCGCCACCCTCCTCCCGGTTTCGATAAATGGTTC
GACTTCGCGCGCGCACACGGCGCCCTCGTCGTCGAGGACTTCTTCGACCAAATCCACCATGACCTTGAGCCTTTT
TGGGGCGCCAACCCCCTCGACATGCGCCGGCGAGCAAGCCAGTTCGAGATGACCATCAACATTCGAAACGGCACC
GCATCGGCAGGCTCGGACTGGTTTTGGACGCAGATATGGCTCAAATTGATCAAGAAGATTGAAGTCTTTCTTCCC
GACATGGACTTGGCCCTCAACGCCATGGACGAGCCACGCATCGTCGTTCCCTGGGAGAATATAAACGAGCATGTC
AGCAAGGCGGCCCGGACGCGCAAGCTGAAGAAGCCCAAGTCGGTCGTGTCCGAGTTCCAGAGCCTGCCGCAGCCG
AGAACGGAGGAGTTGAGCGTCAAGACTCCCGACATAGAGTGGGAGGAAACAAGTGAGCTGGACGGATCCGCCCTC
GAGACTGTCCCGTCGACGAACTCGCAGAGCTGACAAAGTGCCGACCAGAACCCTACTGGGTCATTGCCCGCCGTG
GCTGCCCCCCCGACAGTCCGGCTCGGAAGGCCCCTCTGCGGGAGTCGTTTGCCGAGCCTCCCGTCATCAGCACCG
AGCATGCCCGACCACATCTCTACGAGGGCTACGTCGCCAACTTCACCATGTCCAACGAGATCTGCCACCAGCCCG
ACCTCCAGGGCCTCCAGGGCGCCCTCATCGAACCCATCACGACCAAGGCGACCGACGTCATGTTTCCCATGTTTG
GCGGCTCCAAGCTGACCATCAATAACGAGATACTCCTGCCGGCGCCCATGTACTGGAACGAAGAGGAGCGCTTCA
CCGGCGGCGACGACCACGGCGTTCCTTGGGCGGACAAGAGCAACAGCACCGTCTGGCGCGGCGTCGCCACCGGAG
GCAAGAACCATGAAAGCAACTGGAGGGGGTTCCAGCGCCACCGCTTCGTCGCCATGTGCAACGGGACCAAGGTCG
GGCTGGTGGAGTCGGGCCAGCAGAAGGCGGAAAACTTCGCCTTGCCCGACGGCCAGTACAATGTGAGCGCGCAGA
GGGATCAAAGGCTCGCGGACTGGATCAATCAGTTCTCCGACGTCGGCTTCACCGACCTCTTCTGTGACCCCCCGA
ACGACGGATGGTGCAGCTACACCGACTTCTATTTCGAGCCCCAGCCCGGGTTGAAGATGGTGGAGCAGTTTAGCT
CCAAGTTCCTGCCCGACATCGACGGCAACTCCTTTTCCGGCCGCTACCTGGGCTTCCTGCGGTCGACGTCACTAC
CCATCAAGGCCACCATCTGGCGGGAGTGGCACGACAGCCGTCTGGTGCCGTGGAAGCACTTTGTTCCCATGGACA
ACCGCTTCTCCGACTTGTACGGCATCATGGACTACTTCCTCGGCTACGACGGCCGCAACGACCACGACGCCGAGG
CCGAGAAGATTGCGTCCGCCGGCAAGGAGTGGGCGGAGCGGGTCCTGCGCAAGGAGGACATGCTCGTCTACGTCA
TGCGGTTGCTGCTCGAGTACGCACGCGTCATCGACGACAACCGCGAGGCGATGGGATGGGTCGACGACGCGGTCA
GGAACCCTGCCCTGGCGAAGAAGTGGCAGCGTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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