Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|252
Gene name
LocationContig_1046:6..641
Strand+
Gene length (bp)635
Transcript length (bp)570
Coding sequence length (bp)570
Protein length (aa) 190

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06742 DUF1214 Protein of unknown function (DUF1214) 1.6E-24 43 167

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4903 0.2448 0.5397 0.102 0.3176 0.017 0.0578 0.0884 0.4632 0.1409

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup320
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|513
Ophiocordyceps australis map64 (Brazil) OphauB2|5354
Ophiocordyceps camponoti-floridani Ophcf2|00923
Ophiocordyceps camponoti-rufipedis Ophun1|512
Ophiocordyceps kimflemingae Ophio5|4563
Ophiocordyceps kimflemingae Ophio5|7261
Ophiocordyceps subramaniannii Hirsu2|252 (this protein)
Ophiocordyceps subramaniannii Hirsu2|4440
Ophiocordyceps subramaniannii Hirsu2|6269
Ophiocordyceps subramaniannii Hirsu2|6270

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|252
LRRPLGNGWADFPAPYAGDFHDHYARRALAASADYLQLVPAEALYPEWAPADGGPGLSLRRDEAYLVTFPSGRPP
ARGYWSLTAYDESGSLVPNPLGRHSLGDRSGLTFANGDLVYGTGAANRTADPFSILIQPADVPPPANWTSNWLPA
PARGGDFSLILRLYGPTGALTHGGSYVYPIVKKRRAFFQ*
Coding >Hirsu2|252
CTGCGCCGGCCCCTCGGCAACGGCTGGGCCGACTTCCCGGCCCCGTACGCCGGCGACTTCCACGACCACTACGCC
CGCCGCGCCCTCGCCGCCTCGGCCGACTACCTGCAGCTCGTCCCGGCCGAGGCGCTGTACCCGGAGTGGGCGCCC
GCCGACGGCGGCCCGGGCCTGTCGCTGCGCCGCGACGAGGCCTACCTCGTCACCTTCCCCTCCGGCCGGCCGCCC
GCCCGCGGCTACTGGAGCCTGACGGCCTACGACGAGTCCGGCTCGCTCGTGCCCAACCCGCTCGGCCGCCACTCG
CTCGGCGACCGCTCCGGCCTGACCTTCGCCAACGGCGACCTCGTCTACGGGACGGGCGCCGCCAACCGCACCGCC
GACCCCTTCTCCATCCTCATCCAGCCGGCCGATGTCCCGCCGCCGGCCAACTGGACCAGCAACTGGCTGCCCGCG
CCCGCCCGTGGCGGAGACTTTTCGCTCATCCTCCGGCTCTACGGCCCGACCGGGGCCTTGACTCACGGCGGCTCC
TACGTCTACCCCATCGTCAAGAAACGACGTGCCTTCTTCCAGTAG
Transcript >Hirsu2|252
CTGCGCCGGCCCCTCGGCAACGGCTGGGCCGACTTCCCGGCCCCGTACGCCGGCGACTTCCACGACCACTACGCC
CGCCGCGCCCTCGCCGCCTCGGCCGACTACCTGCAGCTCGTCCCGGCCGAGGCGCTGTACCCGGAGTGGGCGCCC
GCCGACGGCGGCCCGGGCCTGTCGCTGCGCCGCGACGAGGCCTACCTCGTCACCTTCCCCTCCGGCCGGCCGCCC
GCCCGCGGCTACTGGAGCCTGACGGCCTACGACGAGTCCGGCTCGCTCGTGCCCAACCCGCTCGGCCGCCACTCG
CTCGGCGACCGCTCCGGCCTGACCTTCGCCAACGGCGACCTCGTCTACGGGACGGGCGCCGCCAACCGCACCGCC
GACCCCTTCTCCATCCTCATCCAGCCGGCCGATGTCCCGCCGCCGGCCAACTGGACCAGCAACTGGCTGCCCGCG
CCCGCCCGTGGCGGAGACTTTTCGCTCATCCTCCGGCTCTACGGCCCGACCGGGGCCTTGACTCACGGCGGCTCC
TACGTCTACCCCATCGTCAAGAAACGACGTGCCTTCTTCCAGTAG
Gene >Hirsu2|252
CTGCGCCGGCCCCTCGGCAACGGCTGGGCCGACTTCCCGGCCCCGTACGCCGGCGACTTCCACGACCACTACGCC
CGCCGCGCCCTCGCCGCCTCGGCCGACTACCTGCAGCTCGTCCCGGCCGAGGCGCTGTACCCGGAGTGGGCGCCC
GCCGACGGCGGCCCGGGCCTGTCGCTGCGCCGCGACGAGGCCTACCTCGTCACCTTCCCCTCCGGCCGGCCGCCC
GCCCGCGGCTACTGGAGCCTGACGGCCTACGACGAGTCCGGCTCGCTCGTGCCCAACCCGCTCGGCCGCCACTCG
CTCGGCGACCGCTCCGGCCTGACCTTCGCCAACGGCGACCTCGTCTACGGGACGGGCGCCGCCAACCGCACCGCC
GACCCCTTCTCCATCCTCATCCAGCCGGCCGATGTCCCGCCGCCGGCCAACTGGACCAGCAACTGGCTGCCCGCG
CCCGCCCGTGGCGGAGACTTTTCGCTCATCCGTAAGTCCATCTTGTTCGCCTCCTTGGTCCGACTTGTTTCTTGT
TGACTCTCTCCCTTCTCTTAGTCCGGCTCTACGGCCCGACCGGGGCCTTGACTCACGGCGGCTCCTACGTCTACC
CCATCGTCAAGAAACGACGTGCCTTCTTCCAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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