© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2510 |
| Gene name | |
| Location | Contig_160:306..1549 |
| Strand | - |
| Gene length (bp) | 1243 |
| Transcript length (bp) | 1167 |
| Coding sequence length (bp) | 1167 |
| Protein length (aa) | 389 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 6.0E-09 | 138 | 240 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0090729 | toxin activity | Yes |
| GO:0005615 | extracellular space | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2245 | 0.0835 | 0.8654 | 0.356 | 0.1626 | 0.1797 | 0.474 | 0.5024 | 0.4816 | 0.0113 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 25 | 0.960092 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 6565 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2510 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2510 MHTRWASLVLALFLNVVLWSGGGVGRNLPAARTSTGTEPRPSLPLPPWLNTPEEAAAAAAAAVGGSIGRQGPPGD DNSTAEAAPRQPPPPWLADEPEEERAEGGGRGRRGLPSYKFPSKLGKAAERPPRYVFRGVHEDLPPERVMQQGGL LPNVADPRTLSPNSYQLLYHLEDGHGEESAYVSTSTSFEVAASYARPGGYVYVVKTTPNMVPIEYSIDRYFTRWE REYAALGGLQDGQIVDCLQMPAAGADWDVEELVPFFWDEGEDVSLNTLQPKRLLKDGLVEARREHLRYDHVRFEP MSASPGQPQLAGFAPTSGLWNKAALKRFDRHRPAWQHARDFMEAIGTPDGWSPRFPLFHCWWQEAGAERDNDVAA GELAGSSRISWPP* |
| Coding | >Hirsu2|2510 ATGCACACGCGCTGGGCCTCGCTGGTGCTCGCCCTCTTCCTGAATGTCGTCCTGTGGAGCGGCGGCGGCGTCGGG CGCAACCTCCCGGCGGCCAGGACCAGCACCGGCACCGAGCCGCGCCCTTCTCTCCCTCTGCCCCCGTGGCTGAAC ACGCCGGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGCGGCAGCATCGGGCGGCAGGGCCCCCCGGGCGAT GACAACAGCACGGCTGAGGCCGCGCCTCGGCAGCCTCCGCCCCCGTGGCTGGCGGACGAGCCGGAGGAGGAGCGG GCCGAGGGCGGCGGACGCGGGCGGCGCGGGCTCCCGTCGTACAAGTTCCCGTCGAAGCTGGGCAAGGCGGCGGAG CGGCCGCCGCGGTACGTGTTCCGCGGCGTACACGAAGACCTGCCGCCGGAGCGGGTGATGCAGCAGGGCGGGCTG CTGCCCAACGTGGCGGACCCGCGCACGCTGTCGCCCAACTCGTACCAGCTGCTCTACCACCTCGAGGACGGGCAC GGCGAGGAGTCGGCGTACGTGTCGACGTCGACGTCGTTCGAGGTGGCGGCCAGCTACGCGCGGCCGGGCGGCTAC GTCTACGTCGTCAAGACGACGCCCAACATGGTGCCGATCGAGTACTCCATCGACCGCTACTTCACCCGGTGGGAG CGCGAGTACGCGGCCCTGGGCGGACTGCAGGACGGCCAGATCGTCGACTGCCTGCAGATGCCGGCGGCCGGCGCC GACTGGGACGTCGAGGAGCTGGTGCCCTTCTTCTGGGACGAGGGCGAGGACGTCTCGCTCAACACGCTCCAGCCC AAGCGGCTGCTCAAGGACGGCCTGGTCGAGGCCCGCCGCGAGCACCTCCGCTACGACCACGTCCGCTTCGAGCCC ATGTCGGCCAGCCCGGGCCAGCCGCAGCTGGCCGGCTTCGCGCCCACCTCGGGCCTGTGGAACAAGGCGGCGCTG AAGCGCTTCGACCGCCACCGCCCGGCCTGGCAGCACGCCCGCGACTTCATGGAGGCCATCGGCACCCCGGACGGC TGGTCCCCGCGCTTCCCGCTCTTCCACTGCTGGTGGCAGGAGGCCGGGGCCGAGCGGGACAACGACGTCGCCGCG GGAGAGCTGGCCGGGAGCAGCCGCATCTCGTGGCCGCCCTAG |
| Transcript | >Hirsu2|2510 ATGCACACGCGCTGGGCCTCGCTGGTGCTCGCCCTCTTCCTGAATGTCGTCCTGTGGAGCGGCGGCGGCGTCGGG CGCAACCTCCCGGCGGCCAGGACCAGCACCGGCACCGAGCCGCGCCCTTCTCTCCCTCTGCCCCCGTGGCTGAAC ACGCCGGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGCGGCAGCATCGGGCGGCAGGGCCCCCCGGGCGAT GACAACAGCACGGCTGAGGCCGCGCCTCGGCAGCCTCCGCCCCCGTGGCTGGCGGACGAGCCGGAGGAGGAGCGG GCCGAGGGCGGCGGACGCGGGCGGCGCGGGCTCCCGTCGTACAAGTTCCCGTCGAAGCTGGGCAAGGCGGCGGAG CGGCCGCCGCGGTACGTGTTCCGCGGCGTACACGAAGACCTGCCGCCGGAGCGGGTGATGCAGCAGGGCGGGCTG CTGCCCAACGTGGCGGACCCGCGCACGCTGTCGCCCAACTCGTACCAGCTGCTCTACCACCTCGAGGACGGGCAC GGCGAGGAGTCGGCGTACGTGTCGACGTCGACGTCGTTCGAGGTGGCGGCCAGCTACGCGCGGCCGGGCGGCTAC GTCTACGTCGTCAAGACGACGCCCAACATGGTGCCGATCGAGTACTCCATCGACCGCTACTTCACCCGGTGGGAG CGCGAGTACGCGGCCCTGGGCGGACTGCAGGACGGCCAGATCGTCGACTGCCTGCAGATGCCGGCGGCCGGCGCC GACTGGGACGTCGAGGAGCTGGTGCCCTTCTTCTGGGACGAGGGCGAGGACGTCTCGCTCAACACGCTCCAGCCC AAGCGGCTGCTCAAGGACGGCCTGGTCGAGGCCCGCCGCGAGCACCTCCGCTACGACCACGTCCGCTTCGAGCCC ATGTCGGCCAGCCCGGGCCAGCCGCAGCTGGCCGGCTTCGCGCCCACCTCGGGCCTGTGGAACAAGGCGGCGCTG AAGCGCTTCGACCGCCACCGCCCGGCCTGGCAGCACGCCCGCGACTTCATGGAGGCCATCGGCACCCCGGACGGC TGGTCCCCGCGCTTCCCGCTCTTCCACTGCTGGTGGCAGGAGGCCGGGGCCGAGCGGGACAACGACGTCGCCGCG GGAGAGCTGGCCGGGAGCAGCCGCATCTCGTGGCCGCCCTAG |
| Gene | >Hirsu2|2510 ATGCACACGCGCTGGGCCTCGCTGGTGCTCGCCCTCTTCCTGAATGTCGTCCTGTGGAGCGGCGGCGGCGTCGGG CGCAACCTCCCGGCGGCCAGGACCAGCACCGGCACCGAGCCGCGCCCTTCTCTCCCTCTGCCCCCGTGGCTGAAC ACGCCGGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGCGGCAGCATCGGGCGGCAGGGCCCCCCGGGCGAT GACAACAGCACGGCTGAGGCCGCGCCTCGGCAGCCTCCGCCCCCGTGGCTGGCGGACGAGCCGGAGGAGGAGCGG GCCGAGGGCGGCGGACGCGGGCGGCGCGGGCTCCCGTCGTACAAGTTCCCGTCGAAGCTGGGCAAGGCGGCGGAG CGGCCGCCGCGGTACGTGTTCCGCGGCGTACACGAAGACCTGCCGCCGGAGCGGGTGATGCAGCAGGGCGGGCTG CTGCCCAACGTGGCGGACCCGCGCACGCTGTCGCCCAACTCGTACCAGCTGCTCTACCACCTCGAGGACGGGCAC GGCGAGGAGTCGGCGTACGTGTCGACGTCGACGTCGTTCGAGGTGGCGGCCAGCTACGCGCGGCCGGGCGGCTAC GTCTACGTCGTCAAGACGACGCCCAACATGGTGCCGATCGAGTACTCCATCGACCGCTACTTCACCCGGTGGGAG CGCGAGTACGCGGCCCTGGGCGGACTGCAGGACGGCCAGATCGTCGACTGCCTGCAGATGCCGGCGGCCGGCGCC GACTGGGACGTCGAGGAGCTGGTGCCCTTCTTCTGGGACGAGGGCGAGGACGTCTCGCTCAACACGCTCCAGCCC AAGCGGCTGCTCAAGGACGGCCTGGTCGAGGCCCGCCGCGAGCACCTCCGCTACGACCACGTCCGCTTCGAGCCC ATGTCGGCCAGCCCGGGCCAGCCGCAGCTGGCCGGCTTCGCGCCCACCTCGGGCCTGTGGAACAAGGCGGCGCTG AAGCGCTTCGACCGCCACCGCCCGGCCTGGCAGCACGCCCGCGACTTCATGGAGGCCATCGGCACCCCGGACGGC TGGTCCCCGCGCTTCCCGCTCTTCCACTGCTGGTGGCAGGAGGCCGGGGCCGAGCGGGACAACGACGTCGCCGCG GGAGAGCTGGCCGGGAGCAGCCGCATCTCGTCCGGGCCGATGGAGCCGGAGCCGGCCGTGGCGGGGCCGTCGTGG GACACGGCCAGCGGCGGCCTGCCGCCCGAGGTGGCCGCCCTAG |