© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|251 |
| Gene name | |
| Location | Contig_1045:6405..8641 |
| Strand | + |
| Gene length (bp) | 2236 |
| Transcript length (bp) | 2070 |
| Coding sequence length (bp) | 2070 |
| Protein length (aa) | 690 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00474 | SSF | Sodium:solute symporter family | 7.5E-22 | 49 | 459 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94469|DUR31_SCHPO | Probable urea active transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-1 PE=3 SV=1 | 6 | 689 | 0.0E+00 |
| sp|P33413|DUR3_YEAST | Urea active transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUR3 PE=1 SV=2 | 1 | 643 | 0.0E+00 |
| sp|F4KD71|DUR3_ARATH | Urea-proton symporter DUR3 OS=Arabidopsis thaliana GN=DUR3 PE=1 SV=1 | 8 | 655 | 3.0E-166 |
| sp|Q9URY6|DUR33_SCHPO | Probable urea active transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-3 PE=3 SV=1 | 8 | 689 | 6.0E-159 |
| sp|Q7XBS0|DUR3_ORYSJ | Urea-proton symporter DUR3 OS=Oryza sativa subsp. japonica GN=DUR3 PE=1 SV=1 | 6 | 655 | 4.0E-158 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94469|DUR31_SCHPO | Probable urea active transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-1 PE=3 SV=1 | 6 | 689 | 0.0E+00 |
| sp|P33413|DUR3_YEAST | Urea active transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUR3 PE=1 SV=2 | 1 | 643 | 0.0E+00 |
| sp|F4KD71|DUR3_ARATH | Urea-proton symporter DUR3 OS=Arabidopsis thaliana GN=DUR3 PE=1 SV=1 | 8 | 655 | 3.0E-166 |
| sp|Q9URY6|DUR33_SCHPO | Probable urea active transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-3 PE=3 SV=1 | 8 | 689 | 6.0E-159 |
| sp|Q7XBS0|DUR3_ORYSJ | Urea-proton symporter DUR3 OS=Oryza sativa subsp. japonica GN=DUR3 PE=1 SV=1 | 6 | 655 | 4.0E-158 |
| sp|Q8TFG0|DUR32_SCHPO | Probable urea active transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dur3-2 PE=3 SV=1 | 6 | 657 | 4.0E-125 |
| sp|P96169|SGLT_VIBPH | Sodium/glucose cotransporter OS=Vibrio parahaemolyticus GN=sglT PE=1 SV=2 | 43 | 431 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.0822 | 0.1255 | 0.0345 | 0.5013 | 0.0478 | 0.0058 | 0.5015 | 0.4199 | 0.3323 | 0.0031 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 55 | 73 | 18 |
| 3 | 88 | 110 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 163 | 185 | 22 |
| 6 | 198 | 220 | 22 |
| 7 | 254 | 271 | 17 |
| 8 | 284 | 306 | 22 |
| 9 | 342 | 364 | 22 |
| 10 | 397 | 419 | 22 |
| 11 | 429 | 451 | 22 |
| 12 | 458 | 477 | 19 |
| 13 | 497 | 519 | 22 |
| 14 | 581 | 603 | 22 |
| 15 | 618 | 640 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 5017 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|251 MGSPGPALSQGFGYGIILGLGFAFAVLMISLTYILKRFNNEVQTSEMFNTAGRTVKSGLVASAVVSSWTWAATLL QSSGVCYRYGVSGPFWYASGATVQILLFATLAITLKKRAPNAHTFLEVIKARYGTAAHLTFIVFGLMTNVLVSLM LIAGGSATVNALTGVHPVAAIFIMPIPVVAYTFIGGLKATFITDYIHGVAVLIIVMVFALNAYATSDVLGSPSAV YDRLVEAARAHPVAGNRDGSYLTMRSQGGVTFFIINIVGGFGTVFLDNGYYNKAIAAHPVHALPGYIMGGAAWFA IPWLTATTLGLAALALESSPRFPTFPDRMSEAEVSAGLALPYAAVALLGKGGAAATLVMIFLAVTSSFNSELVAT SSIFTYDVYRTYVRPDASGRRLILMSHACMVLYAAVICCVSVGLLYNGISMGYLYLLMGVLISAAVIPATLTLLW SRQNRVAAALTPVLGTACAIVAWLVTASRTCGRLDVECTGSNDPMLAGNVTALLSPLVFVPALCLGFGFDRYDWR SMMDIRKADDADAAAAPAASSDPGAATREGAGVAEAEVREEDDDAFAAEQRKLKRAFRLACIVTTIMVLSLLVLW PMPLYGTGYIFSKKFFTGWVTVGIIWIFCSFIAVGLYPAWESRATLTRLARAVVTGKTRPTSPAETVRADEDSSG TVTPSEQVSAGKKE* |
| Coding | >Hirsu2|251 ATGGGCAGCCCCGGCCCGGCATTGAGCCAAGGCTTTGGCTACGGCATCATCCTCGGCTTGGGCTTCGCCTTTGCC GTCTTGATGATCTCCCTGACGTACATCCTCAAGCGGTTCAACAATGAGGTGCAGACGTCCGAGATGTTCAACACG GCCGGCCGGACCGTCAAGTCCGGGCTGGTGGCCTCGGCGGTAGTGTCGTCGTGGACGTGGGCGGCGACGCTGCTG CAGAGCTCGGGCGTCTGCTACCGCTACGGCGTGTCGGGCCCGTTCTGGTACGCGTCCGGGGCGACGGTGCAGATC CTGCTGTTCGCGACGCTGGCCATCACGCTCAAGAAGCGGGCGCCCAACGCGCACACCTTCCTCGAGGTCATCAAG GCGCGGTACGGCACGGCGGCGCACCTGACCTTCATCGTCTTCGGGCTCATGACCAACGTGCTGGTGTCGCTGATG CTCATCGCCGGCGGCTCGGCCACGGTCAACGCGCTGACGGGGGTGCACCCGGTGGCGGCCATCTTCATCATGCCC ATCCCCGTCGTGGCCTACACCTTCATCGGCGGGCTCAAGGCGACCTTCATCACCGACTACATCCACGGGGTGGCG GTGCTCATCATCGTCATGGTCTTCGCGCTCAACGCGTACGCCACGTCGGACGTGCTCGGCAGCCCGTCGGCCGTC TACGACCGGCTGGTGGAGGCGGCGCGGGCGCACCCCGTGGCCGGCAACCGCGACGGCAGCTACCTGACGATGCGG TCGCAGGGCGGCGTCACCTTCTTCATCATCAACATCGTCGGCGGCTTCGGCACCGTCTTCCTCGACAACGGCTAC TACAACAAGGCCATCGCGGCGCACCCGGTGCACGCGCTGCCGGGCTACATCATGGGCGGCGCCGCCTGGTTCGCC ATCCCGTGGCTGACGGCGACGACGCTCGGCCTGGCGGCGCTGGCGCTCGAGTCGAGCCCGCGCTTCCCGACCTTC CCGGACCGCATGAGCGAGGCCGAGGTGTCGGCCGGGCTGGCCCTGCCGTACGCCGCCGTCGCGCTGCTGGGCAAG GGCGGCGCGGCGGCGACGCTCGTCATGATCTTCCTGGCCGTCACCTCGTCCTTCAACTCGGAGCTGGTGGCGACG TCGTCCATCTTCACCTACGACGTCTACCGCACCTACGTCCGGCCCGACGCCAGCGGCCGCCGCCTGATCCTCATG TCGCACGCGTGCATGGTGCTGTACGCGGCCGTCATCTGCTGCGTCTCGGTCGGCCTGCTGTACAACGGCATCTCG ATGGGCTACCTGTACCTGCTGATGGGCGTCCTCATCTCGGCCGCCGTCATCCCGGCCACGCTGACGCTGCTGTGG AGCCGGCAGAACCGCGTGGCGGCGGCGCTGACGCCCGTGCTGGGCACGGCCTGCGCCATCGTCGCCTGGCTCGTC ACGGCCAGCCGGACGTGCGGCCGGCTCGACGTCGAGTGCACCGGCTCCAACGACCCGATGCTCGCCGGCAACGTC ACGGCCCTGCTGTCGCCGCTCGTCTTCGTGCCGGCCCTCTGCCTCGGCTTCGGCTTCGACCGGTACGACTGGCGG TCCATGATGGACATTCGCAAGGCCGACGACGCCGATGCCGCTGCCGCGCCCGCCGCCTCGTCCGACCCCGGCGCC GCCACGCGGGAGGGCGCCGGGGTGGCGGAGGCCGAGGTGCGGGAAGAAGACGACGACGCGTTCGCGGCGGAGCAG CGGAAGCTGAAGCGGGCCTTTAGGCTGGCCTGCATCGTCACCACCATCATGGTGCTATCGCTCCTGGTGCTGTGG CCGATGCCGCTGTACGGGACCGGCTACATCTTCTCCAAGAAGTTCTTCACCGGGTGGGTGACGGTCGGCATCATC TGGATCTTCTGCTCCTTCATCGCCGTCGGGCTGTACCCGGCGTGGGAGAGCCGGGCGACGCTGACGCGGCTCGCG AGGGCGGTGGTGACGGGCAAGACGCGGCCGACGTCGCCGGCGGAGACGGTGCGGGCGGACGAGGACTCGAGCGGG ACGGTGACACCGTCGGAACAGGTTTCGGCGGGCAAGAAGGAGTAG |
| Transcript | >Hirsu2|251 ATGGGCAGCCCCGGCCCGGCATTGAGCCAAGGCTTTGGCTACGGCATCATCCTCGGCTTGGGCTTCGCCTTTGCC GTCTTGATGATCTCCCTGACGTACATCCTCAAGCGGTTCAACAATGAGGTGCAGACGTCCGAGATGTTCAACACG GCCGGCCGGACCGTCAAGTCCGGGCTGGTGGCCTCGGCGGTAGTGTCGTCGTGGACGTGGGCGGCGACGCTGCTG CAGAGCTCGGGCGTCTGCTACCGCTACGGCGTGTCGGGCCCGTTCTGGTACGCGTCCGGGGCGACGGTGCAGATC CTGCTGTTCGCGACGCTGGCCATCACGCTCAAGAAGCGGGCGCCCAACGCGCACACCTTCCTCGAGGTCATCAAG GCGCGGTACGGCACGGCGGCGCACCTGACCTTCATCGTCTTCGGGCTCATGACCAACGTGCTGGTGTCGCTGATG CTCATCGCCGGCGGCTCGGCCACGGTCAACGCGCTGACGGGGGTGCACCCGGTGGCGGCCATCTTCATCATGCCC ATCCCCGTCGTGGCCTACACCTTCATCGGCGGGCTCAAGGCGACCTTCATCACCGACTACATCCACGGGGTGGCG GTGCTCATCATCGTCATGGTCTTCGCGCTCAACGCGTACGCCACGTCGGACGTGCTCGGCAGCCCGTCGGCCGTC TACGACCGGCTGGTGGAGGCGGCGCGGGCGCACCCCGTGGCCGGCAACCGCGACGGCAGCTACCTGACGATGCGG TCGCAGGGCGGCGTCACCTTCTTCATCATCAACATCGTCGGCGGCTTCGGCACCGTCTTCCTCGACAACGGCTAC TACAACAAGGCCATCGCGGCGCACCCGGTGCACGCGCTGCCGGGCTACATCATGGGCGGCGCCGCCTGGTTCGCC ATCCCGTGGCTGACGGCGACGACGCTCGGCCTGGCGGCGCTGGCGCTCGAGTCGAGCCCGCGCTTCCCGACCTTC CCGGACCGCATGAGCGAGGCCGAGGTGTCGGCCGGGCTGGCCCTGCCGTACGCCGCCGTCGCGCTGCTGGGCAAG GGCGGCGCGGCGGCGACGCTCGTCATGATCTTCCTGGCCGTCACCTCGTCCTTCAACTCGGAGCTGGTGGCGACG TCGTCCATCTTCACCTACGACGTCTACCGCACCTACGTCCGGCCCGACGCCAGCGGCCGCCGCCTGATCCTCATG TCGCACGCGTGCATGGTGCTGTACGCGGCCGTCATCTGCTGCGTCTCGGTCGGCCTGCTGTACAACGGCATCTCG ATGGGCTACCTGTACCTGCTGATGGGCGTCCTCATCTCGGCCGCCGTCATCCCGGCCACGCTGACGCTGCTGTGG AGCCGGCAGAACCGCGTGGCGGCGGCGCTGACGCCCGTGCTGGGCACGGCCTGCGCCATCGTCGCCTGGCTCGTC ACGGCCAGCCGGACGTGCGGCCGGCTCGACGTCGAGTGCACCGGCTCCAACGACCCGATGCTCGCCGGCAACGTC ACGGCCCTGCTGTCGCCGCTCGTCTTCGTGCCGGCCCTCTGCCTCGGCTTCGGCTTCGACCGGTACGACTGGCGG TCCATGATGGACATTCGCAAGGCCGACGACGCCGATGCCGCTGCCGCGCCCGCCGCCTCGTCCGACCCCGGCGCC GCCACGCGGGAGGGCGCCGGGGTGGCGGAGGCCGAGGTGCGGGAAGAAGACGACGACGCGTTCGCGGCGGAGCAG CGGAAGCTGAAGCGGGCCTTTAGGCTGGCCTGCATCGTCACCACCATCATGGTGCTATCGCTCCTGGTGCTGTGG CCGATGCCGCTGTACGGGACCGGCTACATCTTCTCCAAGAAGTTCTTCACCGGGTGGGTGACGGTCGGCATCATC TGGATCTTCTGCTCCTTCATCGCCGTCGGGCTGTACCCGGCGTGGGAGAGCCGGGCGACGCTGACGCGGCTCGCG AGGGCGGTGGTGACGGGCAAGACGCGGCCGACGTCGCCGGCGGAGACGGTGCGGGCGGACGAGGACTCGAGCGGG ACGGTGACACCGTCGGAACAGGTTTCGGCGGGCAAGAAGGAGTAG |
| Gene | >Hirsu2|251 ATGGGCAGCCCCGGCCCGGCATTGAGCCAAGGCTTTGGCTACGGCATCATCCTCGGCTTGGGCTTCGCCTTTGCC GTCTTGATGGTATGGCGAACAGGAACCCAAGCATCCGAGCTCTCCCCTTCTCCCGCTCGGGACCCGACACCCGAA GGCTGACGCCTCTGGCTTGGTCCCGGATAGATCTCCCTGACGTACATCCTCAAGCGGTTCAACAATGAGGTGCAG ACGTCCGAGATGTTCAACACGGCCGGCCGGACCGTCAAGTCCGGGCTGGTGGCCTCGGCGGTAGTGTCGTCGTGG ACGTGGGCGGCGACGCTGCTGCAGAGCTCGGGCGTCTGCTACCGCTACGGCGTGTCGGGCCCGTTCTGGTACGCG TCCGGGGCGACGGTGCAGATCCTGCTGTTCGCGACGCTGGCCATCACGCTCAAGAAGCGGGCGCCCAACGCGCAC ACCTTCCTCGAGGTCATCAAGGCGCGGTACGGCACGGCGGCGCACCTGACCTTCATCGTCTTCGGGCTCATGACC AACGTGCTGGTGTCGCTGATGCTCATCGCCGGCGGCTCGGCCACGGTCAACGCGCTGACGGGGGTGCACCCGGTG GCGGCCATCTTCATCATGCCCATCCCCGTCGTGGCCTACACCTTCATCGGCGGGCTCAAGGCGACCTTCATCACC GACTACATCCACGGGGTGGCGGTGCTCATCATCGTCATGGTCTTCGCGCTCAACGCGTACGCCACGTCGGACGTG CTCGGCAGCCCGTCGGCCGTCTACGACCGGCTGGTGGAGGCGGCGCGGGCGCACCCCGTGGCCGGCAACCGCGAC GGCAGCTACCTGACGATGCGGTCGCAGGGCGGCGTCACCTTCTTCATCATCAACATCGTCGGCGGCTTCGGCACC GTCTTCCTCGACAACGGCTACTACAACAAGGCCATCGCGGCGCACCCGGTGCACGCGCTGCCGGGCTACATCATG GGCGGCGCCGCCTGGTTCGCCATCCCGTGGCTGACGGCGACGACGCTCGGCCTGGCGGCGCTGGCGCTCGAGTCG AGCCCGCGCTTCCCGACCTTCCCGGACCGCATGAGCGAGGCCGAGGTGTCGGCCGGGCTGGCCCTGCCGTACGCC GCCGTCGCGCTGCTGGGCAAGGGCGGCGCGGCGGCGACGCTCGTCATGATCTTCCTGGCCGTCACCTCGTCCTTC AACTCGGAGCTGGTGGCGACGTCGTCCATCTTCACCTACGACGTCTACCGCACCTACGTCCGGCCCGACGCCAGC GGCCGCCGCCTGATCCTCATGTCGCACGCGTGCATGGTGCTGTACGCGGCCGTCATCTGCTGCGTCTCGGTCGGC CTGCTGTACAACGGCATCTCGATGGGCTACCTGTACCTGCTGATGGGCGTCCTCATCTCGGCCGCCGTCATCCCG GCCACGCTGACGCTGCTGTGGAGCCGGCAGAACCGCGTGGCGGCGGCGCTGACGCCCGTGCTGGGCACGGCCTGC GCCATCGTCGCCTGGCTCGTCACGGCCAGCCGGACGTGCGGCCGGCTCGACGTCGAGTGCACCGGCTCCAACGAC CCGATGCTCGCCGGCAACGTCACGGCCCTGCTGTCGCCGCTCGTCTTCGTGCCGGCCCTCTGCCTCGGCTTCGGC TTCGACCGGTACGACTGGCGGTCCATGATGGACATTCGCAAGGCCGACGACGCCGATGCCGCTGCCGCGCCCGCC GCCTCGTCCGACCCCGGCGCCGCCACGCGGGAGGGCGCCGGGGTGGCGGAGGCCGAGGTGCGGGAAGAAGACGAC GACGCGTTCGCGGCGGAGCAGCGGAAGCTGAAGCGGGCCTTTAGGCTGGCCTGCATCGTCACCACCATCATGTAC GTGTTTTTTTTTTTCGAGCCTTTCCTCTCGCCTCTCCCCCTTGCCCGCCGCTAACCCGGCCGGCAGGGTGCTATC GCTCCTGGTGCTGTGGCCGATGCCGCTGTACGGGACCGGCTACATCTTCTCCAAGAAGTTCTTCACCGGGTGGGT GACGGTCGGCATCATCTGGATCTTCTGCTCCTTCATCGCCGTCGGGCTGTACCCGGCGTGGGAGAGCCGGGCGAC GCTGACGCGGCTCGCGAGGGCGGTGGTGACGGGCAAGACGCGGCCGACGTCGCCGGCGGAGACGGTGCGGGCGGA CGAGGACTCGAGCGGGACGGTGACACCGTCGGAACAGGTTTCGGCGGGCAAGAAGGAGTAG |