© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2507 |
| Gene name | |
| Location | Contig_16:64873..66829 |
| Strand | + |
| Gene length (bp) | 1956 |
| Transcript length (bp) | 1812 |
| Coding sequence length (bp) | 1812 |
| Protein length (aa) | 604 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03663 | Glyco_hydro_76 | Glycosyl hydrolase family 76 | 3.0E-160 | 38 | 403 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 11 | 461 | 1.0E-136 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 27 | 461 | 1.0E-135 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 16 | 438 | 2.0E-133 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 31 | 461 | 2.0E-130 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 10 | 461 | 2.0E-124 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P36091|DCW1_YEAST | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCW1 PE=1 SV=1 | 11 | 461 | 1.0E-136 |
| sp|Q75DG6|DCW1_ASHGO | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCW1 PE=3 SV=2 | 27 | 461 | 1.0E-135 |
| sp|Q6FLP9|DCW1_CANGA | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DCW1 PE=3 SV=1 | 16 | 438 | 2.0E-133 |
| sp|Q5AD78|DCW1_CANAL | Mannan endo-1,6-alpha-mannosidase DCW1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DCW1 PE=1 SV=1 | 31 | 461 | 2.0E-130 |
| sp|Q05031|DFG5_YEAST | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DFG5 PE=1 SV=1 | 10 | 461 | 2.0E-124 |
| sp|Q5ACZ2|DFG5_CANAL | Mannan endo-1,6-alpha-mannosidase DFG5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DFG5 PE=1 SV=1 | 8 | 461 | 8.0E-122 |
| sp|O74556|YCZ2_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C970.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.02 PE=3 SV=1 | 26 | 416 | 1.0E-109 |
| sp|Q9P6I3|YHG7_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.07c PE=3 SV=2 | 35 | 461 | 2.0E-93 |
| sp|Q9P6I4|YHG6_SCHPO | Putative mannan endo-1,6-alpha-mannosidase C1198.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1198.06c PE=3 SV=1 | 24 | 469 | 2.0E-89 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.1263 | 0.1054 | 0.3193 | 0.5098 | 0.1146 | 0.0232 | 0.5803 | 0.4417 | 0.4697 | 0.015 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 28 | 0.999722 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 70 | 89 | 19 |
| 3 | 439 | 461 | 22 |
| 4 | 476 | 498 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH76 | 6.4E-112 | 33 | 403 |
| Orthofinder run ID | 4 |
| Orthogroup | 7 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2507 MVPTPRCLGRLVVAAVLLLAGGPLGAKAYDLNPDSADSIKSIAKNMADDMLSFYNGDKPGGTPGLLPQPYYWWEA GAMMGALVDYWYYTGDSAYNDLVTQALLFQVGENDDYMPRNQTLTEGNDDQGFWGLAVMSAAENNFPNPPADKPQ WLGLAQAVFNTQAARWDPTQCGGGLRWQIFHWNKGFDYKNSISQACFFALGARLALYTGNHTYAEWAEKTWDWMV SVSFIDQYWRVLDGAHTGPNCTDITPYQFTYNAGGFMLGAAAMYNFTQEARWKDRLDSLFESSKVFFTGPRKNIM TEVACEPVDRCNLDQQSFKAYLSRWLAAITKWAPHTYRSIMPYLRASAVAAAKQCTGGPNGRMCGLKWNQDRYDG STGVGQQMAAMEVTLSCMVKERAAPVTEHSGGTSKGSPGAGGDDIGREHPAGPSYRPITAADRAGAAVMTAIVLL GMLVGIFWVFLDESSDKSPLEQLRDLGGSASASVTALSAGAGTVAVLHRVKGVEEKPRTVMSSVRETALRSSSDI NRALEEAPVIIGSVRNQMPDQRPRRVSSMPLGWPHNPSLRAGAATETGGPGRPAPPRGEERSAQSSPEACSASVP QQR* |
| Coding | >Hirsu2|2507 ATGGTTCCGACGCCGCGATGCCTCGGTCGTCTCGTCGTCGCCGCCGTGCTGCTTCTCGCCGGCGGTCCTTTGGGG GCCAAGGCCTATGACCTGAACCCGGACTCGGCTGACTCCATCAAGTCGATCGCCAAGAACATGGCAGACGACATG CTCTCCTTCTACAACGGCGACAAGCCCGGCGGCACCCCGGGCCTCCTGCCCCAGCCTTACTACTGGTGGGAGGCC GGCGCCATGATGGGTGCCCTCGTCGACTACTGGTACTATACGGGCGACAGCGCCTACAACGACCTCGTCACGCAG GCGCTGCTCTTCCAGGTCGGCGAAAACGACGACTACATGCCGCGCAACCAGACGCTCACCGAGGGCAACGACGAC CAGGGCTTCTGGGGCCTCGCCGTCATGTCCGCGGCCGAGAACAACTTCCCCAATCCCCCGGCCGACAAGCCGCAG TGGCTGGGCCTCGCCCAGGCCGTCTTCAACACGCAGGCCGCGCGCTGGGATCCCACGCAGTGCGGCGGCGGCCTT CGCTGGCAGATCTTCCACTGGAACAAGGGCTTCGACTACAAGAACTCCATCTCCCAGGCCTGCTTCTTCGCCCTC GGCGCCCGCCTCGCCCTTTACACCGGCAACCACACGTACGCCGAGTGGGCGGAGAAGACGTGGGACTGGATGGTG TCGGTCAGCTTCATCGACCAGTACTGGCGCGTCCTCGACGGCGCCCACACCGGGCCCAACTGCACCGACATCACG CCCTACCAGTTCACCTACAACGCCGGCGGCTTCATGCTCGGCGCCGCCGCCATGTACAACTTCACCCAGGAGGCC AGGTGGAAGGACCGGCTCGACAGCCTCTTCGAGAGCAGCAAGGTCTTCTTCACCGGGCCCCGCAAGAACATCATG ACCGAGGTCGCCTGCGAGCCCGTCGACCGCTGCAACTTGGATCAACAGTCCTTCAAGGCGTACCTGAGTCGCTGG CTCGCCGCCATCACCAAATGGGCCCCGCACACGTACCGCTCCATCATGCCCTACCTCCGCGCCTCGGCCGTCGCC GCCGCCAAGCAGTGCACGGGCGGCCCCAACGGCCGCATGTGCGGCCTCAAGTGGAACCAGGACCGCTATGACGGC TCCACCGGCGTCGGCCAGCAGATGGCCGCCATGGAGGTGACGCTGTCGTGCATGGTCAAGGAGCGGGCGGCCCCC GTCACCGAGCACAGCGGCGGCACCAGCAAGGGCAGCCCGGGCGCCGGCGGCGACGACATCGGCCGGGAGCACCCC GCCGGCCCCAGCTACAGGCCCATCACCGCCGCCGACAGGGCCGGCGCCGCCGTCATGACCGCCATCGTCCTCCTC GGCATGCTCGTCGGCATCTTCTGGGTCTTTCTCGACGAGTCGTCCGACAAGAGCCCCCTGGAACAGCTCCGGGAC CTGGGCGGCTCGGCCTCGGCGTCCGTGACCGCGCTGTCCGCCGGCGCCGGCACCGTCGCCGTCCTCCATCGAGTC AAGGGAGTCGAGGAGAAGCCGAGGACGGTGATGAGCTCTGTCCGAGAGACAGCCCTCCGCTCCAGCTCGGACATC AACCGGGCCCTGGAGGAAGCGCCGGTCATCATCGGCTCCGTTCGCAACCAGATGCCCGATCAGCGACCGCGACGG GTGTCCAGCATGCCCCTGGGCTGGCCGCACAATCCATCCCTCAGAGCCGGTGCGGCGACGGAGACGGGCGGCCCA GGGCGGCCGGCACCGCCACGGGGCGAGGAGAGGTCGGCGCAGTCGAGCCCGGAGGCATGTTCCGCGTCGGTACCG CAACAGCGGTGA |
| Transcript | >Hirsu2|2507 ATGGTTCCGACGCCGCGATGCCTCGGTCGTCTCGTCGTCGCCGCCGTGCTGCTTCTCGCCGGCGGTCCTTTGGGG GCCAAGGCCTATGACCTGAACCCGGACTCGGCTGACTCCATCAAGTCGATCGCCAAGAACATGGCAGACGACATG CTCTCCTTCTACAACGGCGACAAGCCCGGCGGCACCCCGGGCCTCCTGCCCCAGCCTTACTACTGGTGGGAGGCC GGCGCCATGATGGGTGCCCTCGTCGACTACTGGTACTATACGGGCGACAGCGCCTACAACGACCTCGTCACGCAG GCGCTGCTCTTCCAGGTCGGCGAAAACGACGACTACATGCCGCGCAACCAGACGCTCACCGAGGGCAACGACGAC CAGGGCTTCTGGGGCCTCGCCGTCATGTCCGCGGCCGAGAACAACTTCCCCAATCCCCCGGCCGACAAGCCGCAG TGGCTGGGCCTCGCCCAGGCCGTCTTCAACACGCAGGCCGCGCGCTGGGATCCCACGCAGTGCGGCGGCGGCCTT CGCTGGCAGATCTTCCACTGGAACAAGGGCTTCGACTACAAGAACTCCATCTCCCAGGCCTGCTTCTTCGCCCTC GGCGCCCGCCTCGCCCTTTACACCGGCAACCACACGTACGCCGAGTGGGCGGAGAAGACGTGGGACTGGATGGTG TCGGTCAGCTTCATCGACCAGTACTGGCGCGTCCTCGACGGCGCCCACACCGGGCCCAACTGCACCGACATCACG CCCTACCAGTTCACCTACAACGCCGGCGGCTTCATGCTCGGCGCCGCCGCCATGTACAACTTCACCCAGGAGGCC AGGTGGAAGGACCGGCTCGACAGCCTCTTCGAGAGCAGCAAGGTCTTCTTCACCGGGCCCCGCAAGAACATCATG ACCGAGGTCGCCTGCGAGCCCGTCGACCGCTGCAACTTGGATCAACAGTCCTTCAAGGCGTACCTGAGTCGCTGG CTCGCCGCCATCACCAAATGGGCCCCGCACACGTACCGCTCCATCATGCCCTACCTCCGCGCCTCGGCCGTCGCC GCCGCCAAGCAGTGCACGGGCGGCCCCAACGGCCGCATGTGCGGCCTCAAGTGGAACCAGGACCGCTATGACGGC TCCACCGGCGTCGGCCAGCAGATGGCCGCCATGGAGGTGACGCTGTCGTGCATGGTCAAGGAGCGGGCGGCCCCC GTCACCGAGCACAGCGGCGGCACCAGCAAGGGCAGCCCGGGCGCCGGCGGCGACGACATCGGCCGGGAGCACCCC GCCGGCCCCAGCTACAGGCCCATCACCGCCGCCGACAGGGCCGGCGCCGCCGTCATGACCGCCATCGTCCTCCTC GGCATGCTCGTCGGCATCTTCTGGGTCTTTCTCGACGAGTCGTCCGACAAGAGCCCCCTGGAACAGCTCCGGGAC CTGGGCGGCTCGGCCTCGGCGTCCGTGACCGCGCTGTCCGCCGGCGCCGGCACCGTCGCCGTCCTCCATCGAGTC AAGGGAGTCGAGGAGAAGCCGAGGACGGTGATGAGCTCTGTCCGAGAGACAGCCCTCCGCTCCAGCTCGGACATC AACCGGGCCCTGGAGGAAGCGCCGGTCATCATCGGCTCCGTTCGCAACCAGATGCCCGATCAGCGACCGCGACGG GTGTCCAGCATGCCCCTGGGCTGGCCGCACAATCCATCCCTCAGAGCCGGTGCGGCGACGGAGACGGGCGGCCCA GGGCGGCCGGCACCGCCACGGGGCGAGGAGAGGTCGGCGCAGTCGAGCCCGGAGGCATGTTCCGCGTCGGTACCG CAACAGCGGTGA |
| Gene | >Hirsu2|2507 ATGGTTCCGACGCCGCGATGCCTCGGTCGTCTCGTCGTCGCCGCCGTGCTGCTTCTCGCCGGCGGTCCTTTGGGG GCCAAGGCCTATGACCTGAACCCGGACTCGGCTGGTACGATAAGCCCCCTCATCATCCATGGCCAATGGCAGCTG ACGAGCCTCTGGTCTGACCCTACGCCCAGACTCCATCAAGTCGATCGCCAAGAACATGGCAGACGACATGCTCTC CTTCTACAACGGCGACAAGCCCGGCGGCACCCCGGGCCTCCTGCCCCAGCCTTACTACTGTACGTCCCGTCATCG GGCATGTCGTCATCCTCACCTTGGCTTGGGCCTCTCGCTGACCAAGGGTCCGACGCAGGGTGGGAGGCCGGCGCC ATGATGGGTGCCCTCGTCGACTACTGGTACTATACGGGCGACAGCGCCTACAACGACCTCGTCACGCAGGCGCTG CTCTTCCAGGTCGGCGAAAACGACGACTACATGCCGCGCAACCAGACGCTCACCGAGGGCAACGACGACCAGGGC TTCTGGGGCCTCGCCGTCATGTCCGCGGCCGAGAACAACTTCCCCAATCCCCCGGCCGACAAGCCGCAGTGGCTG GGCCTCGCCCAGGCCGTCTTCAACACGCAGGCCGCGCGCTGGGATCCCACGCAGTGCGGCGGCGGCCTTCGCTGG CAGATCTTCCACTGGAACAAGGGCTTCGACTACAAGAACTCCATCTCCCAGGCCTGCTTCTTCGCCCTCGGCGCC CGCCTCGCCCTTTACACCGGCAACCACACGTACGCCGAGTGGGCGGAGAAGACGTGGGACTGGATGGTGTCGGTC AGCTTCATCGACCAGTACTGGCGCGTCCTCGACGGCGCCCACACCGGGCCCAACTGCACCGACATCACGCCCTAC CAGTTCACCTACAACGCCGGCGGCTTCATGCTCGGCGCCGCCGCCATGTACAACTTCACCCAGGAGGCCAGGTGG AAGGACCGGCTCGACAGCCTCTTCGAGAGCAGCAAGGTCTTCTTCACCGGGCCCCGCAAGAACATCATGACCGAG GTCGCCTGCGAGCCCGTCGACCGCTGCAACTTGGATCAACAGTCCTTCAAGGCGTACCTGAGTCGCTGGCTCGCC GCCATCACCAAATGGGCCCCGCACACGTACCGCTCCATCATGCCCTACCTCCGCGCCTCGGCCGTCGCCGCCGCC AAGCAGTGCACGGGCGGCCCCAACGGCCGCATGTGCGGCCTCAAGTGGAACCAGGACCGCTATGACGGCTCCACC GGCGTCGGCCAGCAGATGGCCGCCATGGAGGTGACGCTGTCGTGCATGGTCAAGGAGCGGGCGGCCCCCGTCACC GAGCACAGCGGCGGCACCAGCAAGGGCAGCCCGGGCGCCGGCGGCGACGACATCGGCCGGGAGCACCCCGCCGGC CCCAGCTACAGGCCCATCACCGCCGCCGACAGGGCCGGCGCCGCCGTCATGACCGCCATCGTCCTCCTCGGCATG CTCGTCGGCATCTTCTGGGTCTTTCTCGACGAGTCGTCCGACAAGAGCCCCCTGGAACAGCTCCGGGACCTGGGC GGCTCGGCCTCGGCGTCCGTGACCGCGCTGTCCGCCGGCGCCGGCACCGTCGCCGTCCTCCATCGAGTCAAGGGA GTCGAGGAGAAGCCGAGGACGGTGATGAGCTCTGTCCGAGAGACAGCCCTCCGCTCCAGCTCGGACATCAACCGG GCCCTGGAGGAAGCGCCGGTCATCATCGGCTCCGTTCGCAACCAGATGCCCGATCAGCGACCGCGACGGGTGTCC AGCATGCCCCTGGGCTGGCCGCACAATCCATCCCTCAGAGCCGGTGCGGCGACGGAGACGGGCGGCCCAGGGCGG CCGGCACCGCCACGGGGCGAGGAGAGGTCGGCGCAGTCGAGCCCGGAGGCATGTTCCGCGTCGGTACCGCAACAG CGGTGA |