Protein ID | Hirsu2|2505 |
Gene name | |
Location | Contig_16:57779..59855 |
Strand | - |
Gene length (bp) | 2076 |
Transcript length (bp) | 2076 |
Coding sequence length (bp) | 2076 |
Protein length (aa) | 692 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1646 | 0.0975 | 0.9084 | 0.142 | 0.2386 | 0.0238 | 0.192 | 0.349 | 0.0996 | 0.0052 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999782 |
Orthofinder run ID | 4 |
Orthogroup | 513 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2505 MRIHVPLLFTLLVPATTAGSGGDGPLDAWVDAPLDACGSLSRKLNELGADANKTEPPLLAGQPVHDCLQSLPYDG NIGKRFVRELSKYFEFQSTLETLKSPPPTYASDATDILGGLEKMADKAYKSQNDFDLDLHSLVTSAHDEHFLVRS CSLTVFAFRRDHEGLVSVSKDGLALPELYALSDAALLGRGAGAGVSPVAKIDGQDANEALERIANMSTPQDPDAR YNDLFRSNYLLTTGEHAPNGSFVNCDLWPGANSTTLTFANGSSVEIPTMAVPTKPEFLNTTSAKDAFEIFCLPPK NKEDEKGGEKKRPPAPSSPEGFPPPLARDPYNEVSGYFLDQDTTVMYIASFGPEDEEGDAFPVTYANTVRDILAK SRDTGRTKLLLDMSGNVGGSFNRLFNTFRILFPDKLPPVALRFRRHTAAETIVHSLKGLNESAALEAASSLAFRV VKTPDQQRKFGSPDEILGSDKTFSRVRLSAAYLPDFDLLSKANNPIAGFGQDAARNGTGGKPSPFTAENIAIMTN GYCHSSCAAFVHMLTSTAPQIRTVAFGGRPRPGPMQAIGGVRGGLVMPFEQIASTASNASKILQDPAVRDAPDNC TARRELPAPQLPLRVQGSVNYESVFASEADETPLQFQRQDADCRLFYTVQNIFDPTTTWAAAKKAVWGGGRCVDG SASNAQKQQAGGCKAG* |
Coding | >Hirsu2|2505 ATGCGTATTCACGTACCGCTCTTGTTTACCCTTTTGGTACCGGCTACCACTGCTGGATCAGGCGGTGACGGTCCT CTCGACGCCTGGGTCGACGCGCCTCTTGACGCCTGCGGCTCGCTCTCCCGCAAGCTCAATGAACTCGGCGCGGAC GCGAACAAAACGGAGCCGCCTCTGCTGGCCGGCCAGCCCGTGCACGACTGTCTCCAGTCCCTCCCCTACGATGGC AACATAGGCAAGAGGTTCGTGCGCGAGCTCAGCAAGTACTTTGAGTTCCAGTCGACGCTGGAGACGCTCAAGAGC CCGCCGCCGACGTACGCCTCCGACGCGACCGATATCCTGGGGGGGCTCGAGAAGATGGCCGACAAGGCTTACAAG AGCCAGAACGACTTCGACCTCGACCTCCATAGCCTCGTCACGTCGGCCCACGACGAACACTTCCTCGTCCGCTCG TGCTCCTTGACCGTCTTCGCCTTCCGACGGGACCACGAGGGCCTCGTGTCCGTGTCCAAGGATGGGCTGGCCCTG CCGGAGCTGTACGCCTTAAGCGACGCGGCCCTTCTGGGGCGGGGCGCGGGCGCGGGCGTCTCCCCCGTGGCCAAG ATCGACGGCCAGGACGCCAACGAGGCCCTCGAGCGCATCGCCAACATGTCCACGCCCCAGGACCCGGACGCCCGG TACAACGACCTCTTCCGCTCAAACTACTTGCTGACGACCGGGGAGCACGCGCCCAACGGCAGCTTCGTCAACTGC GACCTGTGGCCGGGGGCCAACAGCACGACGCTCACCTTCGCCAACGGCTCGTCGGTCGAGATCCCGACCATGGCT GTCCCCACAAAGCCGGAGTTCCTGAACACGACGTCGGCCAAGGACGCCTTCGAGATCTTCTGCCTGCCGCCCAAG AACAAGGAGGATGAGAAGGGGGGTGAGAAGAAGCGGCCGCCGGCGCCGTCGAGCCCCGAGGGCTTCCCGCCGCCC CTCGCGCGCGACCCGTACAACGAGGTCAGCGGCTACTTCCTGGACCAAGATACGACGGTAATGTATATCGCAAGC TTTGGCCCCGAGGACGAGGAGGGCGACGCGTTCCCGGTCACGTATGCCAACACGGTCCGCGACATCCTGGCCAAG AGCCGGGACACGGGCCGGACCAAGCTGCTGCTGGACATGTCCGGCAACGTGGGCGGGAGCTTCAACCGGCTCTTC AACACCTTCCGCATCCTCTTCCCGGACAAGCTGCCGCCGGTCGCGCTCCGCTTCCGCCGCCACACCGCGGCCGAG ACCATCGTCCATTCGCTCAAGGGGCTCAACGAGAGCGCGGCGCTGGAGGCCGCCTCGTCGCTGGCGTTCCGCGTC GTCAAAACGCCGGACCAGCAGCGCAAGTTCGGCTCGCCCGACGAGATCCTCGGCAGCGACAAGACCTTTTCGCGC GTCCGTCTCTCGGCCGCCTACCTGCCGGACTTTGACCTCTTGTCGAAGGCCAACAACCCGATCGCCGGCTTCGGC CAAGACGCCGCCCGCAATGGCACCGGCGGCAAGCCGTCCCCGTTCACGGCCGAGAACATTGCCATCATGACCAAC GGCTACTGCCACTCGTCGTGCGCCGCGTTCGTTCACATGCTGACAAGCACGGCGCCGCAGATCCGCACCGTCGCC TTCGGCGGGCGGCCGCGCCCGGGCCCGATGCAGGCCATCGGCGGCGTGCGCGGCGGCCTCGTCATGCCCTTCGAG CAGATCGCCAGCACGGCCAGCAACGCGAGCAAGATCCTGCAGGACCCGGCCGTGCGCGACGCGCCCGACAACTGC ACGGCGCGGCGCGAGCTGCCGGCGCCGCAGCTGCCGCTCCGCGTCCAAGGCTCCGTCAACTACGAGAGCGTGTTC GCGAGCGAGGCGGACGAGACGCCGCTGCAGTTCCAGCGCCAGGACGCCGACTGCCGCCTCTTCTACACGGTCCAG AACATCTTCGACCCCACGACGACCTGGGCGGCCGCCAAGAAGGCCGTCTGGGGCGGCGGCCGGTGCGTCGACGGC TCGGCCTCGAACGCGCAAAAGCAGCAGGCAGGGGGGTGCAAAGCCGGATGA |
Transcript | >Hirsu2|2505 ATGCGTATTCACGTACCGCTCTTGTTTACCCTTTTGGTACCGGCTACCACTGCTGGATCAGGCGGTGACGGTCCT CTCGACGCCTGGGTCGACGCGCCTCTTGACGCCTGCGGCTCGCTCTCCCGCAAGCTCAATGAACTCGGCGCGGAC GCGAACAAAACGGAGCCGCCTCTGCTGGCCGGCCAGCCCGTGCACGACTGTCTCCAGTCCCTCCCCTACGATGGC AACATAGGCAAGAGGTTCGTGCGCGAGCTCAGCAAGTACTTTGAGTTCCAGTCGACGCTGGAGACGCTCAAGAGC CCGCCGCCGACGTACGCCTCCGACGCGACCGATATCCTGGGGGGGCTCGAGAAGATGGCCGACAAGGCTTACAAG AGCCAGAACGACTTCGACCTCGACCTCCATAGCCTCGTCACGTCGGCCCACGACGAACACTTCCTCGTCCGCTCG TGCTCCTTGACCGTCTTCGCCTTCCGACGGGACCACGAGGGCCTCGTGTCCGTGTCCAAGGATGGGCTGGCCCTG CCGGAGCTGTACGCCTTAAGCGACGCGGCCCTTCTGGGGCGGGGCGCGGGCGCGGGCGTCTCCCCCGTGGCCAAG ATCGACGGCCAGGACGCCAACGAGGCCCTCGAGCGCATCGCCAACATGTCCACGCCCCAGGACCCGGACGCCCGG TACAACGACCTCTTCCGCTCAAACTACTTGCTGACGACCGGGGAGCACGCGCCCAACGGCAGCTTCGTCAACTGC GACCTGTGGCCGGGGGCCAACAGCACGACGCTCACCTTCGCCAACGGCTCGTCGGTCGAGATCCCGACCATGGCT GTCCCCACAAAGCCGGAGTTCCTGAACACGACGTCGGCCAAGGACGCCTTCGAGATCTTCTGCCTGCCGCCCAAG AACAAGGAGGATGAGAAGGGGGGTGAGAAGAAGCGGCCGCCGGCGCCGTCGAGCCCCGAGGGCTTCCCGCCGCCC CTCGCGCGCGACCCGTACAACGAGGTCAGCGGCTACTTCCTGGACCAAGATACGACGGTAATGTATATCGCAAGC TTTGGCCCCGAGGACGAGGAGGGCGACGCGTTCCCGGTCACGTATGCCAACACGGTCCGCGACATCCTGGCCAAG AGCCGGGACACGGGCCGGACCAAGCTGCTGCTGGACATGTCCGGCAACGTGGGCGGGAGCTTCAACCGGCTCTTC AACACCTTCCGCATCCTCTTCCCGGACAAGCTGCCGCCGGTCGCGCTCCGCTTCCGCCGCCACACCGCGGCCGAG ACCATCGTCCATTCGCTCAAGGGGCTCAACGAGAGCGCGGCGCTGGAGGCCGCCTCGTCGCTGGCGTTCCGCGTC GTCAAAACGCCGGACCAGCAGCGCAAGTTCGGCTCGCCCGACGAGATCCTCGGCAGCGACAAGACCTTTTCGCGC GTCCGTCTCTCGGCCGCCTACCTGCCGGACTTTGACCTCTTGTCGAAGGCCAACAACCCGATCGCCGGCTTCGGC CAAGACGCCGCCCGCAATGGCACCGGCGGCAAGCCGTCCCCGTTCACGGCCGAGAACATTGCCATCATGACCAAC GGCTACTGCCACTCGTCGTGCGCCGCGTTCGTTCACATGCTGACAAGCACGGCGCCGCAGATCCGCACCGTCGCC TTCGGCGGGCGGCCGCGCCCGGGCCCGATGCAGGCCATCGGCGGCGTGCGCGGCGGCCTCGTCATGCCCTTCGAG CAGATCGCCAGCACGGCCAGCAACGCGAGCAAGATCCTGCAGGACCCGGCCGTGCGCGACGCGCCCGACAACTGC ACGGCGCGGCGCGAGCTGCCGGCGCCGCAGCTGCCGCTCCGCGTCCAAGGCTCCGTCAACTACGAGAGCGTGTTC GCGAGCGAGGCGGACGAGACGCCGCTGCAGTTCCAGCGCCAGGACGCCGACTGCCGCCTCTTCTACACGGTCCAG AACATCTTCGACCCCACGACGACCTGGGCGGCCGCCAAGAAGGCCGTCTGGGGCGGCGGCCGGTGCGTCGACGGC TCGGCCTCGAACGCGCAAAAGCAGCAGGCAGGGGGGTGCAAAGCCGGATGA |
Gene | >Hirsu2|2505 ATGCGTATTCACGTACCGCTCTTGTTTACCCTTTTGGTACCGGCTACCACTGCTGGATCAGGCGGTGACGGTCCT CTCGACGCCTGGGTCGACGCGCCTCTTGACGCCTGCGGCTCGCTCTCCCGCAAGCTCAATGAACTCGGCGCGGAC GCGAACAAAACGGAGCCGCCTCTGCTGGCCGGCCAGCCCGTGCACGACTGTCTCCAGTCCCTCCCCTACGATGGC AACATAGGCAAGAGGTTCGTGCGCGAGCTCAGCAAGTACTTTGAGTTCCAGTCGACGCTGGAGACGCTCAAGAGC CCGCCGCCGACGTACGCCTCCGACGCGACCGATATCCTGGGGGGGCTCGAGAAGATGGCCGACAAGGCTTACAAG AGCCAGAACGACTTCGACCTCGACCTCCATAGCCTCGTCACGTCGGCCCACGACGAACACTTCCTCGTCCGCTCG TGCTCCTTGACCGTCTTCGCCTTCCGACGGGACCACGAGGGCCTCGTGTCCGTGTCCAAGGATGGGCTGGCCCTG CCGGAGCTGTACGCCTTAAGCGACGCGGCCCTTCTGGGGCGGGGCGCGGGCGCGGGCGTCTCCCCCGTGGCCAAG ATCGACGGCCAGGACGCCAACGAGGCCCTCGAGCGCATCGCCAACATGTCCACGCCCCAGGACCCGGACGCCCGG TACAACGACCTCTTCCGCTCAAACTACTTGCTGACGACCGGGGAGCACGCGCCCAACGGCAGCTTCGTCAACTGC GACCTGTGGCCGGGGGCCAACAGCACGACGCTCACCTTCGCCAACGGCTCGTCGGTCGAGATCCCGACCATGGCT GTCCCCACAAAGCCGGAGTTCCTGAACACGACGTCGGCCAAGGACGCCTTCGAGATCTTCTGCCTGCCGCCCAAG AACAAGGAGGATGAGAAGGGGGGTGAGAAGAAGCGGCCGCCGGCGCCGTCGAGCCCCGAGGGCTTCCCGCCGCCC CTCGCGCGCGACCCGTACAACGAGGTCAGCGGCTACTTCCTGGACCAAGATACGACGGTAATGTATATCGCAAGC TTTGGCCCCGAGGACGAGGAGGGCGACGCGTTCCCGGTCACGTATGCCAACACGGTCCGCGACATCCTGGCCAAG AGCCGGGACACGGGCCGGACCAAGCTGCTGCTGGACATGTCCGGCAACGTGGGCGGGAGCTTCAACCGGCTCTTC AACACCTTCCGCATCCTCTTCCCGGACAAGCTGCCGCCGGTCGCGCTCCGCTTCCGCCGCCACACCGCGGCCGAG ACCATCGTCCATTCGCTCAAGGGGCTCAACGAGAGCGCGGCGCTGGAGGCCGCCTCGTCGCTGGCGTTCCGCGTC GTCAAAACGCCGGACCAGCAGCGCAAGTTCGGCTCGCCCGACGAGATCCTCGGCAGCGACAAGACCTTTTCGCGC GTCCGTCTCTCGGCCGCCTACCTGCCGGACTTTGACCTCTTGTCGAAGGCCAACAACCCGATCGCCGGCTTCGGC CAAGACGCCGCCCGCAATGGCACCGGCGGCAAGCCGTCCCCGTTCACGGCCGAGAACATTGCCATCATGACCAAC GGCTACTGCCACTCGTCGTGCGCCGCGTTCGTTCACATGCTGACAAGCACGGCGCCGCAGATCCGCACCGTCGCC TTCGGCGGGCGGCCGCGCCCGGGCCCGATGCAGGCCATCGGCGGCGTGCGCGGCGGCCTCGTCATGCCCTTCGAG CAGATCGCCAGCACGGCCAGCAACGCGAGCAAGATCCTGCAGGACCCGGCCGTGCGCGACGCGCCCGACAACTGC ACGGCGCGGCGCGAGCTGCCGGCGCCGCAGCTGCCGCTCCGCGTCCAAGGCTCCGTCAACTACGAGAGCGTGTTC GCGAGCGAGGCGGACGAGACGCCGCTGCAGTTCCAGCGCCAGGACGCCGACTGCCGCCTCTTCTACACGGTCCAG AACATCTTCGACCCCACGACGACCTGGGCGGCCGCCAAGAAGGCCGTCTGGGGCGGCGGCCGGTGCGTCGACGGC TCGGCCTCGAACGCGCAAAAGCAGCAGGCAGGGGGGTGCAAAGCCGGATGA |