Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2495
Gene name
LocationContig_16:30389..31616
Strand-
Gene length (bp)1227
Transcript length (bp)1161
Coding sequence length (bp)1161
Protein length (aa) 387

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5823 0.5888 0.3315 0.0655 0.249 0.1174 0.1928 0.1226 0.2558 0.0113

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9082
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2495 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2495
MPYDPAHASPLPLLSRATLPAKNRGVFGARSHASVGGRTVSRREAAASPRGPDAHVLRRARPHATVPGDGSGAVA
PPPTPGRAASAAGCSSGGGRGCSWPVCVPRQGPDEEDGDSARRWCACVRACVCAHGGRALARGRVGGAAIAEACM
RGARPDADGGRAGLPTRTTASSVFLSSACPSSAGLAQSRRRRCPSPDREGDGVGEDGTCAGTGWAPLGDGAASCR
ASHLQTHQPSDALQPDLSASPLSSPFPFFSSPARHTPDKAWWRGSTTSRLLASLCLPAAWEPAGVFLGWAGAADP
ECGRGRERFRPEHHVGLEHHHCPPLPPLFLFPFFFSALVTASATQTTNARMRDAADRNDLTSTAAASRSKTGGDP
SSAARLGRRTM*
Coding >Hirsu2|2495
ATGCCCTACGATCCGGCTCACGCGTCCCCTCTCCCTCTCCTCTCCCGGGCTACGTTGCCGGCGAAGAACAGGGGG
GTTTTCGGCGCAAGGTCCCATGCGTCGGTTGGCGGACGGACGGTCTCGCGACGAGAAGCAGCCGCCAGCCCGCGC
GGCCCAGACGCGCACGTTCTGCGTCGGGCGCGTCCGCACGCTACTGTGCCCGGGGACGGGTCCGGCGCCGTCGCT
CCCCCGCCGACGCCGGGACGAGCAGCGAGCGCTGCCGGTTGCTCCTCTGGCGGCGGGCGCGGGTGCAGCTGGCCC
GTTTGCGTGCCGCGACAGGGACCGGACGAGGAGGACGGGGATTCGGCTCGACGATGGTGTGCGTGCGTGCGTGCG
TGCGTGTGTGCGCATGGCGGCCGAGCATTGGCCCGAGGACGAGTCGGCGGCGCAGCGATCGCCGAGGCGTGCATG
CGCGGTGCCCGCCCGGACGCCGACGGGGGCCGCGCCGGCTTGCCCACCCGCACCACCGCCTCTTCTGTCTTCCTC
TCTTCTGCGTGCCCATCGTCCGCTGGCTTGGCCCAAAGCAGACGACGGCGTTGCCCCTCTCCGGACAGAGAGGGC
GATGGCGTGGGCGAAGACGGCACATGTGCCGGGACGGGCTGGGCGCCACTCGGCGACGGGGCTGCATCATGCCGG
GCTTCTCACCTGCAGACGCATCAGCCGAGCGACGCTCTTCAGCCCGACTTGTCCGCTTCGCCCCTCTCCTCTCCT
TTCCCTTTTTTTTCGTCTCCTGCGCGGCACACGCCCGACAAGGCTTGGTGGAGGGGGTCGACAACCTCTCGTCTG
CTTGCTTCGCTCTGCCTGCCGGCCGCATGGGAACCGGCCGGGGTCTTCCTCGGCTGGGCCGGGGCCGCGGATCCA
GAATGTGGTCGAGGCCGAGAGCGGTTCCGCCCCGAACATCATGTCGGGTTGGAACACCATCATTGCCCCCCTCTG
CCGCCGCTCTTCCTCTTTCCTTTCTTTTTTTCCGCCTTGGTCACCGCGTCGGCAACGCAGACGACCAACGCTCGA
ATGCGAGATGCGGCTGATCGGAATGACCTCACCTCGACTGCAGCGGCAAGCAGGAGCAAGACGGGAGGCGACCCG
TCGAGCGCCGCTCGTCTTGGCCGCCGGACCATGTAG
Transcript >Hirsu2|2495
ATGCCCTACGATCCGGCTCACGCGTCCCCTCTCCCTCTCCTCTCCCGGGCTACGTTGCCGGCGAAGAACAGGGGG
GTTTTCGGCGCAAGGTCCCATGCGTCGGTTGGCGGACGGACGGTCTCGCGACGAGAAGCAGCCGCCAGCCCGCGC
GGCCCAGACGCGCACGTTCTGCGTCGGGCGCGTCCGCACGCTACTGTGCCCGGGGACGGGTCCGGCGCCGTCGCT
CCCCCGCCGACGCCGGGACGAGCAGCGAGCGCTGCCGGTTGCTCCTCTGGCGGCGGGCGCGGGTGCAGCTGGCCC
GTTTGCGTGCCGCGACAGGGACCGGACGAGGAGGACGGGGATTCGGCTCGACGATGGTGTGCGTGCGTGCGTGCG
TGCGTGTGTGCGCATGGCGGCCGAGCATTGGCCCGAGGACGAGTCGGCGGCGCAGCGATCGCCGAGGCGTGCATG
CGCGGTGCCCGCCCGGACGCCGACGGGGGCCGCGCCGGCTTGCCCACCCGCACCACCGCCTCTTCTGTCTTCCTC
TCTTCTGCGTGCCCATCGTCCGCTGGCTTGGCCCAAAGCAGACGACGGCGTTGCCCCTCTCCGGACAGAGAGGGC
GATGGCGTGGGCGAAGACGGCACATGTGCCGGGACGGGCTGGGCGCCACTCGGCGACGGGGCTGCATCATGCCGG
GCTTCTCACCTGCAGACGCATCAGCCGAGCGACGCTCTTCAGCCCGACTTGTCCGCTTCGCCCCTCTCCTCTCCT
TTCCCTTTTTTTTCGTCTCCTGCGCGGCACACGCCCGACAAGGCTTGGTGGAGGGGGTCGACAACCTCTCGTCTG
CTTGCTTCGCTCTGCCTGCCGGCCGCATGGGAACCGGCCGGGGTCTTCCTCGGCTGGGCCGGGGCCGCGGATCCA
GAATGTGGTCGAGGCCGAGAGCGGTTCCGCCCCGAACATCATGTCGGGTTGGAACACCATCATTGCCCCCCTCTG
CCGCCGCTCTTCCTCTTTCCTTTCTTTTTTTCCGCCTTGGTCACCGCGTCGGCAACGCAGACGACCAACGCTCGA
ATGCGAGATGCGGCTGATCGGAATGACCTCACCTCGACTGCAGCGGCAAGCAGGAGCAAGACGGGAGGCGACCCG
TCGAGCGCCGCTCGTCTTGGCCGCCGGACCATGTAG
Gene >Hirsu2|2495
ATGCCCTACGATCCGGCTCACGCGTCCCCTCTCCCTCTCCTCTCCCGGGCTACGTTGCCGGCGAAGAACAGGGGG
GTTTTCGGCGCAAGGTCCCATGCGTCGGTTGGCGGACGGACGGTCTCGCGACGAGAAGCAGCCGCCAGCCCGCGC
GGCCCAGACGCGCACGTTCTGCGTCGGGCGCGTCCGCACGCTACTGTGCCCGGGGACGGGTCCGGCGCCGTCGCT
CCCCCGCCGACGCCGGGACGAGCAGCGAGCGCTGCCGGTTGCTCCTCTGGCGGCGGGCGCGGGTGCAGCTGGCCC
GTTTGCGTGCCGCGACAGGGACCGGACGAGGAGGACGGGGATTCGGCTCGACGATGGTGTGCGTGCGTGCGTGCG
TGCGTGTGTGCGCATGGCGGCCGAGCATTGGCCCGAGGACGAGTCGGCGGCGCAGCGATCGCCGAGGCGTGCATG
CGCGGTGCCCGCCCGGACGCCGACGGGGGCCGCGCCGGCTTGCCCACCCGCACCACCGCCTCTTCTGTCTTCCTC
TCTTCTGCGTGCCCATCGTCCGCTGGCTTGGCCCAAAGCAGACGACGGCGTTGCCCCTCTCCGGACAGAGAGGGC
GATGGCGTGGGCGAAGACGGCACATGTGCCGGGACGGGCTGGGCGCCACTCGGCGACGGGGCTGCATCATGCCGG
GCTTCTCACCTGCAGACGCATCAGCCGAGCGACGCTCTTCAGCCCGACTTGTCCGCTTCGCCCCTCTCCTCTCCT
TTCCCTTTTTTTTCGTCTCCTGCGCGGCACACGCCCGACAAGGCTTGGTGGAGGGGGTCGACAACCTCTCGTCTG
CTTGCTTCGCTCTGCCTGCCGGCCGCATGGGAACCGGCCGGGGTCTTCCTCGGCTGGGCCGGGGCCGCGGATCCA
GAATGTGGTCGAGGTAGGTATAGTGAGAGAACCGGGAAGAGGGAGGGGGGGGGTCGAGATGGATGATTCTCATCG
CCAGGCCGAGAGCGGTTCCGCCCCGAACATCATGTCGGGTTGGAACACCATCATTGCCCCCCTCTGCCGCCGCTC
TTCCTCTTTCCTTTCTTTTTTTCCGCCTTGGTCACCGCGTCGGCAACGCAGACGACCAACGCTCGAATGCGAGAT
GCGGCTGATCGGAATGACCTCACCTCGACTGCAGCGGCAAGCAGGAGCAAGACGGGAGGCGACCCGTCGAGCGCC
GCTCGTCTTGGCCGCCGGACCATGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail