© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2493 |
| Gene name | |
| Location | Contig_16:17824..19962 |
| Strand | - |
| Gene length (bp) | 2138 |
| Transcript length (bp) | 1389 |
| Coding sequence length (bp) | 1389 |
| Protein length (aa) | 463 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5785 | 0.5159 | 0.4118 | 0.0766 | 0.2178 | 0.1074 | 0.1873 | 0.1267 | 0.1754 | 0.0715 |
| Orthofinder run ID | 4 |
| Orthogroup | 9081 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2493 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2493 MHVGVLEPGQCEGEAAAARRGPPAPGLLGALQQATPPKVTGLLRRGSPPWHAEEGGAPDFHFLLCPALSIPRSCP AGVVVALEAEVASQMPSSSASASSAASSSPSPRALPPQHRRRPLAIRRFHPHARARVATGQPGTARMHSSNLGRH GPIPQTNPGRWRTSKPLSLSLLRLLLAGAIRRAPPFCQQHRWPPIRSPPATSFFFFFSPPSSAAAVRPGPVISPP KTDVDKASPEGGKNPSDGLAKLWQGIFPFSNRTWIIQPHHHPFHHGAWRQAGRPIVNHQAKPRPSPIPEQGYPLA MGVLRPLTHLDLHLEPRLATSGPVLFQLAWLRPALASHLDFLGSARNPPGTSIDYGSVRRLSFLESHCRVAPTAQ DDPTPRSGYVAESSNFRLLHAVRSVPFASRPRPDQLWAGDQRLTGAGRLGEPSLLATLLSSGGGRELSGAREAVP GARGPDSPGQGP* |
| Coding | >Hirsu2|2493 ATGCACGTAGGGGTCCTCGAGCCGGGACAGTGCGAGGGCGAGGCCGCAGCTGCCCGCCGTGGCCCGCCTGCCCCG GGGCTCCTCGGGGCCCTTCAGCAGGCAACGCCGCCCAAGGTTACAGGGCTGCTCCGGCGCGGCAGCCCCCCCTGG CACGCTGAAGAGGGGGGTGCGCCGGATTTCCATTTCTTACTGTGCCCGGCCTTATCGATCCCAAGGTCCTGTCCG GCCGGGGTCGTGGTAGCGCTTGAGGCTGAAGTGGCCTCCCAAATGCCATCGTCATCAGCATCAGCATCATCAGCA GCATCGTCGTCGCCGTCGCCACGGGCCCTGCCGCCGCAGCACAGACGACGCCCGCTCGCGATCCGACGGTTTCAC CCTCACGCCCGAGCCCGGGTCGCCACGGGGCAGCCAGGCACCGCCAGAATGCACAGCTCGAATCTGGGCCGCCAT GGACCCATCCCGCAGACGAACCCCGGTCGCTGGCGAACAAGCAAGCCTCTCTCTCTCTCACTCCTCCGACTCCTG CTCGCAGGCGCCATTCGTCGGGCACCCCCCTTCTGCCAGCAGCATCGCTGGCCGCCGATCCGCTCGCCGCCTGCT ACCAGTTTTTTTTTTTTTTTTTCCCCGCCTTCTTCTGCGGCCGCCGTTCGACCTGGTCCCGTTATCTCTCCGCCA AAGACCGATGTGGACAAGGCATCGCCAGAGGGCGGGAAAAATCCGTCAGACGGGCTCGCCAAACTGTGGCAGGGC ATCTTCCCCTTCTCGAACAGGACATGGATCATACAGCCACACCACCACCCGTTCCACCATGGAGCATGGAGGCAA GCCGGCCGGCCCATCGTCAACCACCAAGCCAAGCCTCGGCCCTCTCCCATCCCCGAGCAGGGCTACCCCCTAGCC ATGGGAGTGCTCCGGCCACTCACTCATCTCGACCTTCATCTCGAGCCTCGTCTTGCTACTTCCGGTCCTGTCTTG TTCCAGCTTGCTTGGTTACGCCCGGCTCTCGCCTCTCACCTTGACTTCCTGGGATCCGCCAGAAATCCTCCCGGG ACTTCCATCGACTACGGGTCCGTCCGGCGACTTTCCTTCCTCGAATCTCACTGTCGTGTCGCCCCGACGGCCCAA GACGACCCAACGCCACGCTCAGGGTACGTTGCCGAGAGCAGTAACTTTCGCTTGCTCCACGCTGTACGTTCTGTT CCATTTGCCTCGCGACCTCGTCCAGACCAGCTCTGGGCCGGCGACCAAAGGCTGACTGGCGCAGGCCGTCTCGGC GAGCCCAGCCTCCTCGCTACCCTTCTGAGCTCCGGAGGAGGCCGGGAACTCTCAGGGGCTCGAGAGGCCGTTCCC GGGGCTAGAGGGCCCGACTCACCCGGCCAAGGTCCCTGA |
| Transcript | >Hirsu2|2493 ATGCACGTAGGGGTCCTCGAGCCGGGACAGTGCGAGGGCGAGGCCGCAGCTGCCCGCCGTGGCCCGCCTGCCCCG GGGCTCCTCGGGGCCCTTCAGCAGGCAACGCCGCCCAAGGTTACAGGGCTGCTCCGGCGCGGCAGCCCCCCCTGG CACGCTGAAGAGGGGGGTGCGCCGGATTTCCATTTCTTACTGTGCCCGGCCTTATCGATCCCAAGGTCCTGTCCG GCCGGGGTCGTGGTAGCGCTTGAGGCTGAAGTGGCCTCCCAAATGCCATCGTCATCAGCATCAGCATCATCAGCA GCATCGTCGTCGCCGTCGCCACGGGCCCTGCCGCCGCAGCACAGACGACGCCCGCTCGCGATCCGACGGTTTCAC CCTCACGCCCGAGCCCGGGTCGCCACGGGGCAGCCAGGCACCGCCAGAATGCACAGCTCGAATCTGGGCCGCCAT GGACCCATCCCGCAGACGAACCCCGGTCGCTGGCGAACAAGCAAGCCTCTCTCTCTCTCACTCCTCCGACTCCTG CTCGCAGGCGCCATTCGTCGGGCACCCCCCTTCTGCCAGCAGCATCGCTGGCCGCCGATCCGCTCGCCGCCTGCT ACCAGTTTTTTTTTTTTTTTTTCCCCGCCTTCTTCTGCGGCCGCCGTTCGACCTGGTCCCGTTATCTCTCCGCCA AAGACCGATGTGGACAAGGCATCGCCAGAGGGCGGGAAAAATCCGTCAGACGGGCTCGCCAAACTGTGGCAGGGC ATCTTCCCCTTCTCGAACAGGACATGGATCATACAGCCACACCACCACCCGTTCCACCATGGAGCATGGAGGCAA GCCGGCCGGCCCATCGTCAACCACCAAGCCAAGCCTCGGCCCTCTCCCATCCCCGAGCAGGGCTACCCCCTAGCC ATGGGAGTGCTCCGGCCACTCACTCATCTCGACCTTCATCTCGAGCCTCGTCTTGCTACTTCCGGTCCTGTCTTG TTCCAGCTTGCTTGGTTACGCCCGGCTCTCGCCTCTCACCTTGACTTCCTGGGATCCGCCAGAAATCCTCCCGGG ACTTCCATCGACTACGGGTCCGTCCGGCGACTTTCCTTCCTCGAATCTCACTGTCGTGTCGCCCCGACGGCCCAA GACGACCCAACGCCACGCTCAGGGTACGTTGCCGAGAGCAGTAACTTTCGCTTGCTCCACGCTGTACGTTCTGTT CCATTTGCCTCGCGACCTCGTCCAGACCAGCTCTGGGCCGGCGACCAAAGGCTGACTGGCGCAGGCCGTCTCGGC GAGCCCAGCCTCCTCGCTACCCTTCTGAGCTCCGGAGGAGGCCGGGAACTCTCAGGGGCTCGAGAGGCCGTTCCC GGGGCTAGAGGGCCCGACTCACCCGGCCAAGGTCCCTGA |
| Gene | >Hirsu2|2493 ATGCACGTAGGGGTCCTCGAGCCGGGACAGTGCGAGGGCGAGGCCGCAGCTGCCCGCCGTGGCCCGCCTGCCCCG GGGCTCCTCGGGGCCCTTCAGCAGGCAACGCCGCCCAAGGTTACAGGGCTGCTCCGGCGCGGCAGCCCCCCCTGG CACGCTGAAGAGGGGGGTGCGCCGGATTTCCATTTCTTACTGTGCCCGGCCTTATCGATCCCAAGGTCCTGTCCG GCCGGGGTCGTGGTAGCGCTTGAGGCTGAAGTGGCCTCCCAAATGCCATCGTCATCAGCATCAGCATCATCAGCA GCATCGTCGTCGCCGTCGCCACGGGCCCTGCCGCCGCAGCACAGACGACGCCCGCTCGCGATCCGACGGTTTCAC CCTCACGCCCGAGCCCGGGTCGCCACGGGGCAGCCAGGCACCGCCAGAATGCACAGCTCGAATCTGGGCCGCCAT GGACCCATCCCGCAGACGAACCCCGGTCGCTGGCGAACAAGCAAGCCTCTCTCTCTCTCACTCCTCCGACTCCTG CTCGCAGGCGCCATTCGTCGGGCACCCCCCTTCTGCCAGCAGCATCGCTGGCCGCCGATCCGCTCGCCGCCTGCT ACCAGTTTTTTTTTTTTTTTTTCCCCGCCTTCTTCTGCGGCCGCCGTTCGACCTGGTCCCGTTATCTCTCCGCCA AAGTACATACACCATCGAGACGAACCGCACGCACATCATACATACCTAGGACCGATGTGGACAAGGCATCGCCAG AGGGCGGGAAAAATCCGTCAGACGGGCTCGCCAAACTGTGGCAGGGCATCTTCCCCTTCTCGAACAGGACATGGA TCATACAGCCACACCACCACCCGTTCCACCATGGAGCATGGAGGCAAGCCGGCCGGCCCATCGTCAACCACCAAG CCAAGCCTCGGCCCTCTCCCATCCCCGAGCAGGGCTACCCCCTAGCCATGGGAGTGGTGTGGACCGGCCAAGAAA GAAAAACGTGGGCAGTGACGGGGATCCGTCCTCTATCACCACGCCTCTTCCGCACGCCCCCTTCTCCTCTCCATC ATCTCTCTCGACAGATGCTCCAGCAGGTGAGGGGGAGTGCCGCCTGGCGCCAGGGCTGCCTCGTTCCGCCCGGAT GGCTGTGCCTCGTCTCTCCCCTCGCCGCTCGACAGCCGGCTCGGCTTGAAGCCTCCGTATAATATTCCTGCTGCC CCGTCTGCCCTCTTGCTGCCCATCCTGGCCAACTTGCTTTCCTTCTCGGCTTTCCAATCCTTGCCAGGCCTGCCC CCCTTCCCCGCCGTTGCCTGTCACTTCTTTGCATTTCGCATCTGTCCCCTACACCCACCCTCGTTCTTTGTTTGT TTCTGGCGGGGGGAAAAAGGCCGAGGTGGAGTGGCGTCTTGGGTATTGGCACTCTCGCCTTCGCTTCTCTCATAA CCCGGAGCAGGTCCTCGTCCTTCGCCCAGACACCTCGTGCTTCCCATTCAGGGAGCAGCTGCCAGACTTCAAAGC TCCGGCCACTCACTCATCTCGACCTTGTAAGTCGACCTCACTATCGTTTGACCTGACCTTGCGAGACTCCAAAGC CCGCCTGTCCTCTCCGACCCTTGCCCAGACTCATCTGTCCCGGCTTGCTCCTCTTTCATCTCTCCTCTCCACCCA CGTTAGTTGTCGTCCTAACCGAGACCTTCCCTCAGCATCTCGAGCCTCGTCTTGCTACTTCCGGTCCTGTCTTGT TCCAGCTTGCTTGGTTACGCCCGGCTCTCGCCTCTCACCTTGACTTCCTGGGATCCGCCAGAAATCCTCCCGGGA CTTCCATCGACTACGGGTCCGTCCGGCGACTTTCCTTCCTCGAATCTCACTGTCGTGTCGCCCCGACGGCCCAAG ACGACCCAACGCCACGCTCAGGGTACGTTGCCGAGAGCAGTAACTTTCGCTTGCTCCACGCTGTACGTTCTGTTC CATTTGCCTCGCGACCTCGTCCAGACCAGCTCTGGGCCGGCGACCAAAGGCTGACTGGCGCAGGCCGTCTCGGCG AGCCCAGCCTCCTCGCTACCCTTCTGAGCTCCGGAGGAGGCCGGGAACTCTCAGGGGCTCGAGAGGCCGTTCCCG GGGCTAGAGGGCCCGACTCACCCGGCCAAGGTCCCTGA |