Protein ID | Hirsu2|2492 |
Gene name | |
Location | Contig_16:14964..17792 |
Strand | - |
Gene length (bp) | 2828 |
Transcript length (bp) | 2661 |
Coding sequence length (bp) | 2661 |
Protein length (aa) | 887 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 2.2E-52 | 503 | 714 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1498 | 0.115 | 0.0271 | 0.6625 | 0.0553 | 0.0102 | 0.5603 | 0.4671 | 0.6997 | 0.0039 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 266 | 288 | 22 |
2 | 308 | 330 | 22 |
3 | 694 | 716 | 22 |
4 | 731 | 753 | 22 |
5 | 774 | 796 | 22 |
6 | 829 | 851 | 22 |
7 | 858 | 877 | 19 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GT2_Glyco_trans_2_3 | 3.8E-53 | 503 | 712 |
Orthofinder run ID | 4 |
Orthogroup | 220 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2492 MGLKDYFKAGKAEPAPATQDAPPPTQRPPPSTGSEKPPQMGRSGNDMELLPPTPRFHSRPQSSSGRSTPSTHSSM FLDDIKHEVMVNYLYQQQCSQLWVSDGSGEVEGVLLRKARGHYMACPPQLGASAFALACSAMNLQCAMTVNSRVI KTFLQWSPDAVDVPLMNGLRVQILPTLEDLPRARKHQFAAFVASEGLLIVWDDDPMNLVQRAKAIESELMELVWK AGNSDDDDDEKRGGPMATVEIDEESGEIKPEKRPVHLQNTILVSLTLVLVVVSLGAAWRQLAIEVSVDGSYVRLA LVALCPVQVFFTLFFAQVIVGCLAQIFGPVRQLAVNSKFYSARPPPRLQTAILPHVTIQCPVYKEGLQGVIVPTV KSIKQAMSTYELQGGSANMFVNDDGLQLISDEDRRARIEFYADHSIGWVARPRHGENGFLRRGKFKKASNMNFGL MISCKVEERLQALERPAEWSQHDEAQAYEQALKEVLEADGRAWADGNIRVGDYILLIDSDTRVPADCFLDAVSEM EQSPDVGIMQFSSGVMQVVNTYFENGITFFTNLIYSAIRYTVSNGDVAPFVGHNAVLRWSAIQQVSYRDEDGYDK FWSESHVSEDFDMSLRLQCSGYIIRLAAWAGEGFKEGVSLTVYDELARWEKYAYGCNELLFHPIRTWLWRGPFTP LFRRFLFSNIRFTSKITVVSYIGTYYAIGAAWIMTAVNYFLMGWFNGYLDKYYVDSWQVWFSIIIVFNGLGNVAL AVMRYRVGERSLLYALFENFKWTFMLAIFLGGLSLHVSQALLAHMFEIDMTWGATSKEAEFSNFFIEVPKVLKKF KFSMLFALVFIIGMVVLAVAPFVPYGWRITDFVAILPMATVAASHFLLPLALNPALMTFSW* |
Coding | >Hirsu2|2492 ATGGGCCTCAAAGACTACTTCAAGGCCGGCAAGGCCGAGCCTGCTCCGGCAACCCAAGATGCTCCCCCGCCCACC CAGCGCCCGCCTCCTTCTACCGGGTCGGAGAAGCCGCCCCAGATGGGGCGGAGCGGCAACGACATGGAACTCCTG CCGCCCACTCCCCGCTTCCACTCTCGGCCTCAGTCCAGCTCGGGCCGGTCGACACCGTCGACCCACAGCTCCATG TTCCTCGACGACATCAAGCACGAGGTCATGGTCAACTACCTGTACCAGCAGCAGTGCTCGCAGCTCTGGGTGAGC GACGGGTCCGGAGAGGTCGAGGGCGTACTGCTGCGAAAGGCACGCGGCCACTACATGGCTTGTCCGCCCCAGCTG GGCGCCTCGGCCTTTGCCCTGGCCTGCTCCGCCATGAACCTCCAGTGTGCCATGACGGTCAACTCGCGCGTCATC AAGACGTTCCTGCAGTGGTCGCCCGACGCCGTCGACGTGCCCCTGATGAACGGCCTGCGCGTCCAGATCCTGCCG ACGCTCGAGGATCTCCCGCGGGCGCGCAAGCACCAGTTCGCGGCCTTCGTCGCCTCGGAGGGGCTGCTGATCGTC TGGGACGACGACCCGATGAACCTGGTGCAGCGCGCCAAGGCCATCGAGTCGGAGCTCATGGAGCTCGTCTGGAAG GCGGGCAACAGCGACGACGACGACGACGAGAAGCGCGGCGGCCCCATGGCCACGGTCGAGATCGACGAGGAGAGC GGCGAGATCAAGCCGGAGAAGCGGCCGGTCCACCTGCAGAACACGATACTCGTCTCGCTGACGCTGGTGCTCGTC GTCGTCTCGCTCGGCGCGGCCTGGAGGCAGCTGGCCATCGAGGTGTCGGTCGACGGCAGCTACGTCCGCCTCGCC CTCGTCGCCCTCTGCCCCGTCCAGGTCTTCTTCACCCTCTTCTTCGCCCAGGTCATCGTCGGCTGCCTGGCCCAG ATCTTCGGGCCCGTGCGCCAGCTAGCCGTCAACTCCAAGTTCTACTCGGCGCGGCCGCCGCCGCGGCTGCAGACG GCCATCCTGCCGCACGTCACCATCCAGTGCCCGGTCTACAAGGAGGGCCTTCAGGGCGTCATCGTGCCGACGGTC AAGTCGATCAAGCAGGCCATGTCGACGTACGAGCTGCAGGGCGGGTCGGCCAACATGTTCGTCAACGACGACGGG CTGCAGCTCATCTCGGACGAGGACCGGCGGGCGCGGATCGAGTTCTACGCCGACCACAGCATCGGATGGGTGGCC CGGCCGCGGCACGGCGAGAACGGCTTCCTGCGGCGGGGCAAGTTCAAGAAGGCGAGCAACATGAACTTTGGGCTG ATGATCTCGTGCAAGGTGGAGGAGCGGCTGCAGGCGCTGGAGCGGCCGGCCGAGTGGAGCCAGCACGACGAGGCG CAGGCGTACGAGCAGGCGCTCAAGGAGGTGCTGGAGGCGGACGGGCGGGCGTGGGCGGACGGCAACATCCGGGTG GGCGACTACATCCTGCTGATCGACTCGGACACGCGGGTGCCGGCCGACTGCTTCCTCGACGCCGTGTCGGAGATG GAGCAGTCGCCGGACGTGGGCATCATGCAGTTCTCGTCGGGCGTGATGCAGGTGGTCAACACGTACTTTGAGAAC GGCATCACCTTCTTCACCAACCTCATCTACTCGGCCATCCGGTACACCGTGTCCAACGGCGACGTGGCGCCGTTC GTCGGGCACAACGCGGTGCTGCGCTGGTCGGCCATCCAGCAGGTCTCGTACCGGGACGAGGACGGCTACGACAAG TTCTGGTCCGAGTCGCACGTCAGCGAGGACTTCGACATGTCGCTCCGGCTGCAGTGCTCCGGCTACATCATCCGG CTGGCGGCCTGGGCGGGCGAGGGCTTCAAGGAGGGCGTGTCGCTGACGGTGTACGACGAGCTGGCGCGGTGGGAG AAGTACGCGTACGGCTGCAACGAGCTGCTCTTCCACCCGATCCGCACGTGGCTGTGGCGCGGGCCCTTTACGCCG CTCTTCCGCCGCTTCCTCTTCTCCAACATCCGGTTCACGTCCAAGATCACGGTGGTGTCGTACATCGGCACCTAC TACGCCATCGGGGCCGCGTGGATCATGACGGCCGTCAACTACTTCCTCATGGGCTGGTTCAACGGCTACCTGGAC AAGTACTACGTCGACTCGTGGCAGGTCTGGTTCTCCATCATCATCGTCTTCAACGGGCTCGGCAACGTGGCGCTG GCCGTGATGCGGTACCGCGTCGGCGAGCGCAGCCTGCTGTACGCCCTCTTCGAGAACTTCAAGTGGACCTTCATG CTGGCCATCTTCCTCGGCGGCCTGTCGCTGCACGTCAGCCAGGCGCTGCTGGCGCACATGTTCGAGATCGACATG ACGTGGGGGGCCACGAGCAAGGAGGCCGAGTTTTCAAACTTCTTCATCGAGGTGCCCAAGGTGCTGAAGAAGTTC AAGTTCTCCATGCTGTTCGCCCTCGTCTTCATCATCGGCATGGTCGTCCTGGCCGTCGCGCCCTTCGTGCCGTAC GGCTGGCGCATCACCGACTTCGTCGCCATCCTGCCCATGGCCACCGTCGCCGCCAGCCACTTCCTGCTGCCGCTG GCGCTGAACCCCGCCCTGATGACGTTTTCGTGGTGA |
Transcript | >Hirsu2|2492 ATGGGCCTCAAAGACTACTTCAAGGCCGGCAAGGCCGAGCCTGCTCCGGCAACCCAAGATGCTCCCCCGCCCACC CAGCGCCCGCCTCCTTCTACCGGGTCGGAGAAGCCGCCCCAGATGGGGCGGAGCGGCAACGACATGGAACTCCTG CCGCCCACTCCCCGCTTCCACTCTCGGCCTCAGTCCAGCTCGGGCCGGTCGACACCGTCGACCCACAGCTCCATG TTCCTCGACGACATCAAGCACGAGGTCATGGTCAACTACCTGTACCAGCAGCAGTGCTCGCAGCTCTGGGTGAGC GACGGGTCCGGAGAGGTCGAGGGCGTACTGCTGCGAAAGGCACGCGGCCACTACATGGCTTGTCCGCCCCAGCTG GGCGCCTCGGCCTTTGCCCTGGCCTGCTCCGCCATGAACCTCCAGTGTGCCATGACGGTCAACTCGCGCGTCATC AAGACGTTCCTGCAGTGGTCGCCCGACGCCGTCGACGTGCCCCTGATGAACGGCCTGCGCGTCCAGATCCTGCCG ACGCTCGAGGATCTCCCGCGGGCGCGCAAGCACCAGTTCGCGGCCTTCGTCGCCTCGGAGGGGCTGCTGATCGTC TGGGACGACGACCCGATGAACCTGGTGCAGCGCGCCAAGGCCATCGAGTCGGAGCTCATGGAGCTCGTCTGGAAG GCGGGCAACAGCGACGACGACGACGACGAGAAGCGCGGCGGCCCCATGGCCACGGTCGAGATCGACGAGGAGAGC GGCGAGATCAAGCCGGAGAAGCGGCCGGTCCACCTGCAGAACACGATACTCGTCTCGCTGACGCTGGTGCTCGTC GTCGTCTCGCTCGGCGCGGCCTGGAGGCAGCTGGCCATCGAGGTGTCGGTCGACGGCAGCTACGTCCGCCTCGCC CTCGTCGCCCTCTGCCCCGTCCAGGTCTTCTTCACCCTCTTCTTCGCCCAGGTCATCGTCGGCTGCCTGGCCCAG ATCTTCGGGCCCGTGCGCCAGCTAGCCGTCAACTCCAAGTTCTACTCGGCGCGGCCGCCGCCGCGGCTGCAGACG GCCATCCTGCCGCACGTCACCATCCAGTGCCCGGTCTACAAGGAGGGCCTTCAGGGCGTCATCGTGCCGACGGTC AAGTCGATCAAGCAGGCCATGTCGACGTACGAGCTGCAGGGCGGGTCGGCCAACATGTTCGTCAACGACGACGGG CTGCAGCTCATCTCGGACGAGGACCGGCGGGCGCGGATCGAGTTCTACGCCGACCACAGCATCGGATGGGTGGCC CGGCCGCGGCACGGCGAGAACGGCTTCCTGCGGCGGGGCAAGTTCAAGAAGGCGAGCAACATGAACTTTGGGCTG ATGATCTCGTGCAAGGTGGAGGAGCGGCTGCAGGCGCTGGAGCGGCCGGCCGAGTGGAGCCAGCACGACGAGGCG CAGGCGTACGAGCAGGCGCTCAAGGAGGTGCTGGAGGCGGACGGGCGGGCGTGGGCGGACGGCAACATCCGGGTG GGCGACTACATCCTGCTGATCGACTCGGACACGCGGGTGCCGGCCGACTGCTTCCTCGACGCCGTGTCGGAGATG GAGCAGTCGCCGGACGTGGGCATCATGCAGTTCTCGTCGGGCGTGATGCAGGTGGTCAACACGTACTTTGAGAAC GGCATCACCTTCTTCACCAACCTCATCTACTCGGCCATCCGGTACACCGTGTCCAACGGCGACGTGGCGCCGTTC GTCGGGCACAACGCGGTGCTGCGCTGGTCGGCCATCCAGCAGGTCTCGTACCGGGACGAGGACGGCTACGACAAG TTCTGGTCCGAGTCGCACGTCAGCGAGGACTTCGACATGTCGCTCCGGCTGCAGTGCTCCGGCTACATCATCCGG CTGGCGGCCTGGGCGGGCGAGGGCTTCAAGGAGGGCGTGTCGCTGACGGTGTACGACGAGCTGGCGCGGTGGGAG AAGTACGCGTACGGCTGCAACGAGCTGCTCTTCCACCCGATCCGCACGTGGCTGTGGCGCGGGCCCTTTACGCCG CTCTTCCGCCGCTTCCTCTTCTCCAACATCCGGTTCACGTCCAAGATCACGGTGGTGTCGTACATCGGCACCTAC TACGCCATCGGGGCCGCGTGGATCATGACGGCCGTCAACTACTTCCTCATGGGCTGGTTCAACGGCTACCTGGAC AAGTACTACGTCGACTCGTGGCAGGTCTGGTTCTCCATCATCATCGTCTTCAACGGGCTCGGCAACGTGGCGCTG GCCGTGATGCGGTACCGCGTCGGCGAGCGCAGCCTGCTGTACGCCCTCTTCGAGAACTTCAAGTGGACCTTCATG CTGGCCATCTTCCTCGGCGGCCTGTCGCTGCACGTCAGCCAGGCGCTGCTGGCGCACATGTTCGAGATCGACATG ACGTGGGGGGCCACGAGCAAGGAGGCCGAGTTTTCAAACTTCTTCATCGAGGTGCCCAAGGTGCTGAAGAAGTTC AAGTTCTCCATGCTGTTCGCCCTCGTCTTCATCATCGGCATGGTCGTCCTGGCCGTCGCGCCCTTCGTGCCGTAC GGCTGGCGCATCACCGACTTCGTCGCCATCCTGCCCATGGCCACCGTCGCCGCCAGCCACTTCCTGCTGCCGCTG GCGCTGAACCCCGCCCTGATGACGTTTTCGTGGTGA |
Gene | >Hirsu2|2492 ATGGGCCTCAAAGACTACTTCAAGGCCGGCAAGGCCGAGCCTGCTCCGGCAACCCAAGATGCTCCCCCGCCCACC CAGCGCCCGCCTCCTTCTACCGGGTCGGAGAAGCCGCCCCAGATGGGGCGGAGCGGCAACGACATGGAACTCCTG CCGCCCACTCCCCGCTTCCACTCTCGGCCTCAGTCCAGCTCGGGCCGGTCGACACCGTCGACCCACAGCTCCATG TTCCTCGACGACATCAAGCACGAGGTCATGGTCAACTACCTGTACCAGCAGCAGTGCTCGCAGCTCTGGGTGAGC GACGGGTCCGGAGAGGTCGAGGGCGTACTGCTGCGAAAGGCACGCGGCCACTACATGGCTTGTCCGCCCCAGCTG GGCGCCTCGGCCTTTGCCCTGGCCTGCTCCGCCATGAACCTCCAGGTGAGCCGGCTCTGCTGGCCCCCTCCCCTC CCTCCCCCCGTCCGGCCCGGGCCCGACTGACCGCCGTGCAGTGTGCCATGACGGTCAACTCGCGCGTCATCAAGA CGTTCCTGCAGTGGTCGCCCGACGCCGTCGACGTGCCCCTGATGAACGGCCTGCGCGTCCAGATCCTGCCGACGC TCGAGGATCTCCCGCGGGCGCGCAAGCACCAGTTCGCGGCCTTCGTCGCCTCGGAGGGGCTGCTGATCGTCTGGG ACGACGACCCGATGAACCTGGTGCAGCGCGCCAAGGCCATCGAGTCGGAGCTCATGGAGCTCGTCTGGAAGGCGG GCAACAGCGACGACGACGACGACGAGAAGCGCGGCGGCCCCATGGCCACGGTCGAGATCGACGAGGAGAGCGGCG AGATCAAGCCGGAGAAGCGGCCGGTCCACCTGCAGAACACGATACTCGTCTCGCTGACGCTGGTGCTCGTCGTCG TCTCGCTCGGCGCGGCCTGGAGGCAGCTGGCCATCGAGGTGTCGGTCGACGGCAGCTACGTCCGCCTCGCCCTCG TCGCCCTCTGCCCCGTCCAGGTCTTCTTCACCCTCTTCTTCGCCCAGGTCATCGTCGGCTGCCTGGCCCAGATCT TCGGGCCCGTGCGCCAGCTAGCCGTCAACTCCAAGTTCTACTCGGCGCGGCCGCCGCCGCGGCTGCAGACGGCCA TCCTGCCGCACGTCACCATCCAGTGCCCGGTCTACAAGGAGGGCCTTCAGGGCGTCATCGTGCCGACGGTCAAGT CGATCAAGCAGGCCATGTCGACGTACGAGCTGCAGGGCGGGTCGGCCAACATGTTCGTCAACGACGACGGGCTGC AGCTCATCTCGGACGAGGACCGGCGGGCGCGGATCGAGTTCTACGCCGACCACAGCATCGGATGGGTGGCCCGGC CGCGGCACGGCGAGAACGGCTTCCTGCGGCGGGGCAAGTTCAAGAAGGCGAGCAACATGAACTTTGGGCTGATGA TCTCGTGCAAGGTGGAGGAGCGGCTGCAGGCGCTGGAGCGGCCGGCCGAGTGGAGCCAGCACGACGAGGCGCAGG CGTACGAGCAGGCGCTCAAGGAGGTGCTGGAGGCGGACGGGCGGGCGTGGGCGGACGGCAACATCCGGGTGGGCG ACTACATCCTGCTGATCGACTCGGACACGCGGGTGCCGGCCGACTGCTTCCTCGACGCCGTGTCGGAGATGGAGC AGTCGCCGGACGTGGGCATCATGCAGTTCTCGTCGGGCGTGATGCAGGTGGTCAACACGTACTTTGAGAACGGCA TCACCTTCTTCACCAACCTCATCTACTCGGCCATCCGGTACACCGTGTCCAACGGCGACGTGGCGCCGTTCGTCG GGCACAACGCGGTGCTGCGCTGGTCGGCCATCCAGCAGGTCTCGTACCGGGACGAGGACGGCTACGACAAGTTCT GGTCCGAGTCGCACGTCAGCGAGGACTTCGACATGTCGCTCCGGCTGCAGTGCTCCGGCTACATCATCCGGCTGG CGGCCTGGGCGGGCGAGGGCTTCAAGGAGGGCGTGTCGCTGACGGTGTACGACGAGCTGGCGCGGTGGGAGAAGT ACGCGTACGGCTGCAACGAGCTGCTCTTCCACCCGATCCGCACGTGGCTGTGGCGCGGGCCCTTTACGCCGCTCT TCCGCCGCTTCCTCTTCTCCAACATCCGGTTCACGTCCAAGATCACGGTGGTGTCGTACATCGGCACCTACTACG CCATCGGGGCCGCGTGGATCATGACGGCCGTCAACTACTTCCTCATGGGCTGGTTCAACGGCTACCTGGACAAGT ACTACGTCGACTCGTGGCAGGTCTGGTTCTCCATCATCATCGTCTTCAACGGGCTCGGCAACGTGGCGCTGGCCG TGATGCGGTACCGCGTCGGCGAGCGCAGCCTGCTGTACGCCCTCTTCGAGAACTTCAAGTGGACCTTCATGCTGG CCATCTTCCTCGGCGGCCTGTCGCTGCACGTCAGCCAGGCGCTGCTGGCGCACATGTTCGAGATCGACATGACGT GGGGGGCCACGAGCAAGGAGGCCGAGTTTTCAAACTTCTTCATCGAGGTGCCCAAGGTGCTGAAGAAGGTGAGTC TTTTTTTTTTTTTTTTTCCTTCCTTTCCCACCCCGCTCGCCGCCCTCTGTCCGTCTCACACCCATCGGCTCACCT GTCCCGGTCCGCAGTTCAAGTTCTCCATGCTGTTCGCCCTCGTCTTCATCATCGGCATGGTCGTCCTGGCCGTCG CGCCCTTCGTGCCGTACGGCTGGCGCATCACCGACTTCGTCGCCATCCTGCCCATGGCCACCGTCGCCGCCAGCC ACTTCCTGCTGCCGCTGGCGCTGAACCCCGCCCTGATGACGTTTTCGTGGTGA |