Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|249
Gene name
LocationContig_1045:973..1741
Strand-
Gene length (bp)768
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

Domain # Start End Length
1 198 220 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|249
MPSPVSSSLPMQGPTLHGRRNPRSWFLPAVNDFIFHLLYCLFPPPPPSAAPPPFHSRRSTLLSLLSLFFPPPFPP
PPPPPPPLARSSAEAATPASSSSSSSPSKTLHSPHACPEGTASSAHRRRPRRRRARNAASRFLSRRRPANISLGP
RSLPVLLPRDTRAGTLPSVRPAPGRAGTASLALRPPVAGSHLAYKSDLVLAVSLSLCLSLSLSLFLSLPLRTSNW
NRLSLA*
Coding >Hirsu2|249
ATGCCAAGCCCCGTGTCGTCATCGCTCCCGATGCAGGGCCCCACGCTCCACGGCAGACGTAACCCGAGAAGCTGG
TTTCTCCCAGCCGTGAATGATTTTATTTTCCATCTTTTGTACTGCCTTTTCCCCCCTCCACCCCCTTCCGCTGCC
CCCCCGCCTTTCCACTCCCGCCGCTCTACTCTTCTTTCTCTCCTTTCGCTTTTCTTCCCTCCTCCTTTCCCTCCT
CCTCCTCCTCCTCCTCCTCCTCTCGCCAGATCCTCCGCCGAAGCCGCGACCCCTGCTTCGTCGTCGTCGTCGTCG
TCGCCAAGCAAGACCCTTCATTCGCCACACGCCTGTCCGGAGGGCACGGCTTCGTCCGCCCATCGCCGCCGACCT
CGCCGCCGGCGTGCGCGCAACGCCGCCTCTCGCTTCCTGTCCCGACGACGTCCTGCCAACATCTCCCTCGGGCCT
CGTTCGCTTCCGGTCCTGCTCCCGCGAGACACTCGAGCCGGTACGCTGCCATCCGTCCGCCCGGCACCTGGCCGG
GCCGGGACCGCTTCCCTCGCCCTGCGCCCTCCTGTCGCGGGCAGTCATCTGGCCTACAAGTCTGACCTCGTCCTC
GCAGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCCCTCTGCGCACCTCGAACTGG
AACCGCCTCTCGCTAGCCTAG
Transcript >Hirsu2|249
ATGCCAAGCCCCGTGTCGTCATCGCTCCCGATGCAGGGCCCCACGCTCCACGGCAGACGTAACCCGAGAAGCTGG
TTTCTCCCAGCCGTGAATGATTTTATTTTCCATCTTTTGTACTGCCTTTTCCCCCCTCCACCCCCTTCCGCTGCC
CCCCCGCCTTTCCACTCCCGCCGCTCTACTCTTCTTTCTCTCCTTTCGCTTTTCTTCCCTCCTCCTTTCCCTCCT
CCTCCTCCTCCTCCTCCTCCTCTCGCCAGATCCTCCGCCGAAGCCGCGACCCCTGCTTCGTCGTCGTCGTCGTCG
TCGCCAAGCAAGACCCTTCATTCGCCACACGCCTGTCCGGAGGGCACGGCTTCGTCCGCCCATCGCCGCCGACCT
CGCCGCCGGCGTGCGCGCAACGCCGCCTCTCGCTTCCTGTCCCGACGACGTCCTGCCAACATCTCCCTCGGGCCT
CGTTCGCTTCCGGTCCTGCTCCCGCGAGACACTCGAGCCGGTACGCTGCCATCCGTCCGCCCGGCACCTGGCCGG
GCCGGGACCGCTTCCCTCGCCCTGCGCCCTCCTGTCGCGGGCAGTCATCTGGCCTACAAGTCTGACCTCGTCCTC
GCAGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCCCTCTGCGCACCTCGAACTGG
AACCGCCTCTCGCTAGCCTAG
Gene >Hirsu2|249
ATGCCAAGCCCCGTGTCGTCATCGCTCCCGATGCAGGGCCCCACGCTCCACGGCAGACGTAACCCGAGAAGCTGG
TTTCTCCCAGCCGTGAATGATTTTATTTTCCATCTTGTTAGCGTCCGCCCACTTCCTCGCTGCTCGAGCTCATGT
CACCACCCGCCTCACATCGGCCTCATAAGATAGTTGTACTGCCTTTTCCCCCCTCCACCCCCTTCCGCTGCCCCC
CCGCCTTTCCACTCCCGCCGCTCTACTCTTCTTTCTCTCCTTTCGCTTTTCTTCCCTCCTCCTTTCCCTCCTCCT
CCTCCTCCTCCTCCTCCTCTCGCCAGATCCTCCGCCGAAGCCGCGACCCCTGCTTCGTCGTCGTCGTCGTCGTCG
CCAAGCAAGACCCTTCATTCGCCACACGCCTGTCCGGAGGGCACGGCTTCGTCCGCCCATCGCCGCCGACCTCGC
CGCCGGCGTGCGCGCAACGCCGCCTCTCGCTTCCTGTCCCGACGACGTCCTGCCAACATCTCCCTCGGGCCTCGT
TCGCTTCCGGTCCTGCTCCCGCGAGACACTCGAGCCGGTACGCTGCCATCCGTCCGCCCGGCACCTGGCCGGGCC
GGGACCGCTTCCCTCGCCCTGCGCCCTCCTGTCGCGGGCAGTCATCTGGCCTACAAGTCTGACCTCGTCCTCGCA
GTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCCCTCTGCGCACCTCGAACTGGAAC
CGCCTCTCGCTAGCCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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