© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2489 |
| Gene name | |
| Location | Contig_16:1257..1824 |
| Strand | - |
| Gene length (bp) | 567 |
| Transcript length (bp) | 396 |
| Coding sequence length (bp) | 396 |
| Protein length (aa) | 132 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74383|YNV8_SCHPO | Uncharacterized protein C3H7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.08c PE=4 SV=1 | 27 | 124 | 5.0E-10 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1048 | 0.126 | 0.0212 | 0.0793 | 0.9715 | 0.0446 | 0.168 | 0.0569 | 0.0811 | 0.0076 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 56 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 2107 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2489 MASRVTRRLFTVSARRLEQHARSQAELKRETKRNPELMILGGVMALALSGAGYYLASSPTGSTSEVPVHIAKDGM PWEGDAQGKYKYHPGGDPNREPRDAPSALNVVIVPNVTLPKELHDKFNKWGKDNYP* |
| Coding | >Hirsu2|2489 ATGGCCTCCCGCGTCACCCGCCGCCTCTTCACCGTCTCGGCCCGGCGGCTCGAGCAGCACGCCCGCAGCCAGGCC GAGCTCAAGCGCGAGACCAAGCGCAACCCGGAGCTGATGATCCTCGGCGGCGTCATGGCCCTCGCCCTCAGCGGC GCCGGCTACTACCTAGCCTCGTCGCCGACCGGGTCCACGTCGGAGGTGCCGGTGCACATCGCCAAGGACGGCATG CCGTGGGAGGGCGACGCCCAGGGCAAGTACAAGTACCACCCGGGCGGCGACCCGAACCGGGAGCCGAGGGACGCG CCCAGCGCCCTCAACGTCGTCATCGTCCCCAACGTCACCCTGCCCAAGGAGCTGCACGACAAGTTCAACAAGTGG GGCAAGGACAACTACCCCTAA |
| Transcript | >Hirsu2|2489 ATGGCCTCCCGCGTCACCCGCCGCCTCTTCACCGTCTCGGCCCGGCGGCTCGAGCAGCACGCCCGCAGCCAGGCC GAGCTCAAGCGCGAGACCAAGCGCAACCCGGAGCTGATGATCCTCGGCGGCGTCATGGCCCTCGCCCTCAGCGGC GCCGGCTACTACCTAGCCTCGTCGCCGACCGGGTCCACGTCGGAGGTGCCGGTGCACATCGCCAAGGACGGCATG CCGTGGGAGGGCGACGCCCAGGGCAAGTACAAGTACCACCCGGGCGGCGACCCGAACCGGGAGCCGAGGGACGCG CCCAGCGCCCTCAACGTCGTCATCGTCCCCAACGTCACCCTGCCCAAGGAGCTGCACGACAAGTTCAACAAGTGG GGCAAGGACAACTACCCCTAA |
| Gene | >Hirsu2|2489 ATGGCCTCCCGCGTCACCCGCCGCCTCTTCACCGTCTCGGCCCGGCGGCTCGAGCAGCACGCCCGCAGCCAGGCC GAGCTCAAGCGCGAGACCAAGCGCAACCCGGAGCTGATGGTGCGTCGAGGCCGCCGGACCCCCCTCCCCCCCCCC TCCCGGCTGTCCGCGCCGGCTCGTGTGCTGACGGGCGCGACAGATCCTCGGCGGCGTCATGGCCCTCGCCCTCAG CGGCGCCGGCTACTACCTAGGTGCGTTTTTCCGCTCCCCAGGCCGTGCGCCAAAGGCCTCCCGGGGAGATGATCC GTCGTGCTGACGCGCGCGTAACACGCTCCCGGTCCAGCCTCGTCGCCGACCGGGTCCACGTCGGAGGTGCCGGTG CACATCGCCAAGGACGGCATGCCGTGGGAGGGCGACGCCCAGGGCAAGTACAAGTACCACCCGGGCGGCGACCCG AACCGGGAGCCGAGGGACGCGCCCAGCGCCCTCAACGTCGTCATCGTCCCCAACGTCACCCTGCCCAAGGAGCTG CACGACAAGTTCAACAAGTGGGGCAAGGACAACTACCCCTAA |