Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2488
Gene name
LocationContig_16:29..683
Strand+
Gene length (bp)654
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12710 HAD haloacid dehalogenase-like hydrolase 9.4E-22 1 169
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 1.5E-13 22 173
PF08282 Hydrolase_3 haloacid dehalogenase-like hydrolase 1.7E-07 138 189

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P42941|SERB_YEAST Phosphoserine phosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SER2 PE=1 SV=1 1 211 2.0E-54
sp|O74382|SERB_SCHPO Probable phosphoserine phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.07c PE=2 SV=1 1 216 2.0E-49
sp|A0QJI1|SERB_MYCA1 Phosphoserine phosphatase OS=Mycobacterium avium (strain 104) GN=serB PE=1 SV=1 1 211 2.0E-42
sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2138 PE=3 SV=1 1 200 3.0E-40
sp|P44997|SERB_HAEIN Phosphoserine phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=serB PE=3 SV=1 1 203 3.0E-37
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Swissprot ID Swissprot Description Start End E-value
sp|P42941|SERB_YEAST Phosphoserine phosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SER2 PE=1 SV=1 1 211 2.0E-54
sp|O74382|SERB_SCHPO Probable phosphoserine phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3H7.07c PE=2 SV=1 1 216 2.0E-49
sp|A0QJI1|SERB_MYCA1 Phosphoserine phosphatase OS=Mycobacterium avium (strain 104) GN=serB PE=1 SV=1 1 211 2.0E-42
sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2138 PE=3 SV=1 1 200 3.0E-40
sp|P44997|SERB_HAEIN Phosphoserine phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=serB PE=3 SV=1 1 203 3.0E-37
sp|Q58989|SERB_METJA Phosphoserine phosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1594 PE=1 SV=1 1 201 6.0E-37
sp|P0AGB2|SERB_SHIFL Phosphoserine phosphatase OS=Shigella flexneri GN=serB PE=3 SV=1 1 204 2.0E-36
sp|P0AGB0|SERB_ECOLI Phosphoserine phosphatase OS=Escherichia coli (strain K12) GN=serB PE=1 SV=1 1 204 2.0E-36
sp|P0AGB1|SERB_ECO57 Phosphoserine phosphatase OS=Escherichia coli O157:H7 GN=serB PE=3 SV=1 1 204 2.0E-36
sp|B0R7U7|SERB_HALS3 Phosphoserine phosphatase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=serB PE=3 SV=2 1 189 4.0E-16
sp|Q5M819|SERB_RAT Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1 1 201 8.0E-12
sp|Q5RB83|SERB_PONAB Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1 1 201 1.0E-11
sp|P78330|SERB_HUMAN Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2 1 201 1.0E-11
sp|Q99LS3|SERB_MOUSE Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=1 SV=1 1 201 2.0E-11
sp|Q2KHU0|SERB_BOVIN Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1 1 166 7.0E-11
sp|O82796|SERC_ARATH Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=2 1 166 7.0E-10
sp|Q9VSY6|SERB_DROME Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2 SV=1 1 178 2.0E-07
sp|O33611|IMD_STRAJ Inhibition of morphological differentiation protein OS=Streptomyces azureus PE=3 SV=1 74 200 5.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.8672 0.2847 0.2936 0.38 0.4942 0.0442 0.2039 0.274 0.1208 0.017

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2106
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2101
Ophiocordyceps australis map64 (Brazil) OphauB2|1489
Ophiocordyceps camponoti-floridani Ophcf2|01003
Ophiocordyceps camponoti-rufipedis Ophun1|7136
Ophiocordyceps kimflemingae Ophio5|7918
Ophiocordyceps subramaniannii Hirsu2|2488 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2488
MDSTLITQEVIELLAAAVPGRPELRARVADITRRAMHGELEFEASFRERLALLRGLSADLFRDLRPALDLTPGAA
DLVRALRRLGVKTAVLSGGFQPLTDWLAARLGIDHAHANDVVVGPDGTLTGDVRGPVVGRERKRDLLLDIAAREG
VDLAQVVAVGDGANDLLMMAAAGLGVAWNAKPRVQMEADARLNGESLLDLLFLFGFTSDEIAMLIQE*
Coding >Hirsu2|2488
ATGGACAGCACCCTCATCACCCAGGAGGTCATCGAGCTCCTGGCCGCCGCCGTGCCGGGCCGGCCCGAGCTGCGC
GCCCGCGTCGCCGACATCACCCGCCGCGCCATGCACGGCGAGCTCGAGTTCGAGGCCTCGTTCCGCGAGCGCCTC
GCCCTCCTCCGCGGCCTCAGCGCCGACCTCTTCCGGGACCTGCGCCCCGCCCTCGACCTGACCCCCGGCGCCGCC
GACCTCGTCCGCGCCCTGCGCCGCCTCGGCGTCAAGACGGCCGTCCTCTCCGGCGGCTTCCAGCCCCTGACCGAC
TGGCTGGCCGCCCGCCTCGGCATCGACCACGCCCACGCCAACGACGTCGTCGTCGGGCCCGACGGCACCCTCACC
GGCGACGTCCGCGGGCCCGTCGTCGGCCGCGAGCGCAAGCGTGACCTGCTGCTCGACATCGCCGCCCGCGAGGGC
GTCGACCTGGCCCAGGTCGTCGCCGTCGGCGACGGCGCCAACGACCTGCTGATGATGGCCGCCGCCGGCCTCGGC
GTCGCCTGGAACGCCAAGCCGCGCGTCCAGATGGAGGCCGACGCCCGCCTCAACGGCGAGAGCCTGCTCGACCTG
CTCTTCCTCTTTGGCTTCACCAGCGACGAGATCGCCATGCTCATCCAAGAGTGA
Transcript >Hirsu2|2488
ATGGACAGCACCCTCATCACCCAGGAGGTCATCGAGCTCCTGGCCGCCGCCGTGCCGGGCCGGCCCGAGCTGCGC
GCCCGCGTCGCCGACATCACCCGCCGCGCCATGCACGGCGAGCTCGAGTTCGAGGCCTCGTTCCGCGAGCGCCTC
GCCCTCCTCCGCGGCCTCAGCGCCGACCTCTTCCGGGACCTGCGCCCCGCCCTCGACCTGACCCCCGGCGCCGCC
GACCTCGTCCGCGCCCTGCGCCGCCTCGGCGTCAAGACGGCCGTCCTCTCCGGCGGCTTCCAGCCCCTGACCGAC
TGGCTGGCCGCCCGCCTCGGCATCGACCACGCCCACGCCAACGACGTCGTCGTCGGGCCCGACGGCACCCTCACC
GGCGACGTCCGCGGGCCCGTCGTCGGCCGCGAGCGCAAGCGTGACCTGCTGCTCGACATCGCCGCCCGCGAGGGC
GTCGACCTGGCCCAGGTCGTCGCCGTCGGCGACGGCGCCAACGACCTGCTGATGATGGCCGCCGCCGGCCTCGGC
GTCGCCTGGAACGCCAAGCCGCGCGTCCAGATGGAGGCCGACGCCCGCCTCAACGGCGAGAGCCTGCTCGACCTG
CTCTTCCTCTTTGGCTTCACCAGCGACGAGATCGCCATGCTCATCCAAGAGTGA
Gene >Hirsu2|2488
ATGGACAGCACCCTCATCACCCAGGAGGTCATCGAGCTCCTGGCCGCCGCCGTGCCGGGCCGGCCCGAGCTGCGC
GCCCGCGTCGCCGACATCACCCGCCGCGCCATGCACGGCGAGCTCGAGTTCGAGGCCTCGTTCCGCGAGCGCCTC
GCCCTCCTCCGCGGCCTCAGCGCCGACCTCTTCCGGGACCTGCGCCCCGCCCTCGACCTGACCCCCGGCGCCGCC
GACCTCGTCCGCGCCCTGCGCCGCCTCGGCGTCAAGACGGCCGTCCTCTCCGGCGGCTTCCAGCCCCTGACCGAC
TGGCTGGCCGCCCGCCTCGGCATCGACCACGCCCACGCCAACGACGTCGTCGTCGGGCCCGACGGCACCCTCACC
GGCGACGTCCGCGGGCCCGTCGTCGGCCGCGAGCGCAAGCGTGACCTGCTGCTCGACATCGCCGCCCGCGAGGGC
GTCGACCTGGCCCAGGTCGTCGCCGTCGGCGACGGCGCCAACGACCTGCTGATGATGGCCGCCGCCGGCCTCGGC
GTCGCCTGGAACGCCAAGCCGCGCGTCCAGATGGAGGCCGACGCCCGCCTCAACGGCGAGAGCCTGCTCGACCTG
CTCTTCCTCTTTGGCTTCACCAGCGACGAGATCGCCATGCTCATCCAAGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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