Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2485
Gene name
LocationContig_1598:3699..4762
Strand+
Gene length (bp)1063
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20183 DUF6546 Family of unknown function (DUF6546) 2.6E-36 104 313

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5835 0.715 0.1809 0.1642 0.2639 0.007 0.0468 0.1727 0.0469 0.0165

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1171
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|6421
Ophiocordyceps subramaniannii Hirsu2|1028
Ophiocordyceps subramaniannii Hirsu2|1029
Ophiocordyceps subramaniannii Hirsu2|2484
Ophiocordyceps subramaniannii Hirsu2|2485 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6060

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2485
MHKWIHGRRGEPSREQKLRVLGAIPLNFTFVGLDASKREFPRVDVVTGLHLRRQYYRSFNHSSIQMLLRQSFPRL
EELRIESWHVICREPFELGEREARTMVENLPPTLRSVHLFEDFNHTLHPDRHRRIALPTLGHRLCDASHNLTSLS
AAFLVDAWDFFTRFEEHGAEAGASWPNLRTLSLTSRHFRRLGASAERLLEKAGTGAMAMPRLEAMELWTSGEGEA
RVFQFQARGPGGRGPRALWWAERGGGPRLNPSGQCRAAWTGVFRRSARPGQARPEFDLQQRWLPEYVSGSDEHAT
LLRHLVLGREMLHPLSYYQLMWEGDHEGHG*
Coding >Hirsu2|2485
ATGCACAAATGGATCCATGGCCGCCGAGGCGAGCCCTCGCGCGAACAAAAGCTAAGGGTACTGGGAGCGATACCC
CTGAACTTTACCTTTGTAGGCCTCGATGCCTCCAAACGCGAGTTTCCTCGCGTCGACGTCGTGACGGGGCTGCAC
CTGCGTCGGCAGTACTATCGCTCGTTCAACCACTCAAGTATCCAGATGCTGCTGCGGCAGAGCTTCCCGCGGCTG
GAGGAGCTTCGGATCGAGTCGTGGCACGTCATATGCCGAGAGCCGTTCGAGCTCGGCGAGCGAGAGGCTCGCACC
ATGGTTGAGAATCTCCCGCCGACGCTGCGGTCGGTCCACCTGTTCGAGGACTTTAACCACACGCTGCATCCGGAT
CGGCACAGACGAATCGCGTTGCCGACGCTGGGGCATCGGCTCTGCGATGCGAGCCACAACCTGACCAGCCTCTCT
GCCGCCTTCCTCGTCGACGCCTGGGACTTTTTCACCCGGTTCGAGGAGCACGGCGCGGAGGCGGGCGCCAGCTGG
CCGAACCTCCGGACGCTCTCCCTCACGTCGCGCCACTTCCGCCGCCTCGGGGCCTCGGCCGAGCGGCTGCTCGAG
AAGGCCGGCACGGGAGCCATGGCGATGCCGAGGCTCGAGGCCATGGAGCTGTGGACGTCGGGCGAGGGAGAGGCC
CGGGTCTTCCAGTTCCAGGCCCGGGGCCCCGGAGGACGAGGCCCTCGGGCCTTGTGGTGGGCGGAACGGGGCGGC
GGCCCCCGCTTGAACCCCTCGGGCCAGTGCAGGGCCGCGTGGACGGGCGTCTTCCGACGAAGCGCCCGGCCCGGC
CAGGCCCGGCCCGAGTTCGATTTGCAGCAGCGGTGGCTGCCCGAGTACGTGTCCGGGTCGGACGAGCACGCGACC
CTTCTCCGACATCTTGTGCTGGGACGCGAGATGCTGCACCCGCTGTCGTACTACCAGCTGATGTGGGAGGGAGAC
CATGAAGGGCATGGCTAG
Transcript >Hirsu2|2485
ATGCACAAATGGATCCATGGCCGCCGAGGCGAGCCCTCGCGCGAACAAAAGCTAAGGGTACTGGGAGCGATACCC
CTGAACTTTACCTTTGTAGGCCTCGATGCCTCCAAACGCGAGTTTCCTCGCGTCGACGTCGTGACGGGGCTGCAC
CTGCGTCGGCAGTACTATCGCTCGTTCAACCACTCAAGTATCCAGATGCTGCTGCGGCAGAGCTTCCCGCGGCTG
GAGGAGCTTCGGATCGAGTCGTGGCACGTCATATGCCGAGAGCCGTTCGAGCTCGGCGAGCGAGAGGCTCGCACC
ATGGTTGAGAATCTCCCGCCGACGCTGCGGTCGGTCCACCTGTTCGAGGACTTTAACCACACGCTGCATCCGGAT
CGGCACAGACGAATCGCGTTGCCGACGCTGGGGCATCGGCTCTGCGATGCGAGCCACAACCTGACCAGCCTCTCT
GCCGCCTTCCTCGTCGACGCCTGGGACTTTTTCACCCGGTTCGAGGAGCACGGCGCGGAGGCGGGCGCCAGCTGG
CCGAACCTCCGGACGCTCTCCCTCACGTCGCGCCACTTCCGCCGCCTCGGGGCCTCGGCCGAGCGGCTGCTCGAG
AAGGCCGGCACGGGAGCCATGGCGATGCCGAGGCTCGAGGCCATGGAGCTGTGGACGTCGGGCGAGGGAGAGGCC
CGGGTCTTCCAGTTCCAGGCCCGGGGCCCCGGAGGACGAGGCCCTCGGGCCTTGTGGTGGGCGGAACGGGGCGGC
GGCCCCCGCTTGAACCCCTCGGGCCAGTGCAGGGCCGCGTGGACGGGCGTCTTCCGACGAAGCGCCCGGCCCGGC
CAGGCCCGGCCCGAGTTCGATTTGCAGCAGCGGTGGCTGCCCGAGTACGTGTCCGGGTCGGACGAGCACGCGACC
CTTCTCCGACATCTTGTGCTGGGACGCGAGATGCTGCACCCGCTGTCGTACTACCAGCTGATGTGGGAGGGAGAC
CATGAAGGGCATGGCTAG
Gene >Hirsu2|2485
ATGCACAAATGGATCCATGGCCGCCGAGGCGAGCCCTCGCGCGAACAAAAGCTAAGGGTACTGGGAGCGATACCC
CTGAACTTTACCTTTGTAGGCCTCGATGCCTCCAAACGCGAGTTTCCTCGCGTCGACGTCGTGACGGGGCTGCAC
CTGCGTCGGCAGTACTATCGCTCGTTCAACCACTCAAGTATCCAGATGCTGCTGCGGCAGAGCTTCCCGCGGCTG
GAGGAGCTTCGGATCGAGTCGTGGCACGTCATATGCCGAGAGCCGTTCGAGCTCGGCGAGCGAGGTTCGTCGCGC
CATCCCTTTGCCCCCCCAAATCAGCGTGTCGTGGGCAACTGACCAACATGGAGTTGCAGAGGCTCGCACCATGGT
TGAGAATCTCCCGCCGACGCTGCGGTCGGTCCACCTGTTCGAGGACTTTAACCACACGCTGCATCCGGATCGGCA
CAGACGAATCGCGTTGCCGACGCTGGGGCATCGGCTCTGCGATGCGAGCCACAACCTGACCAGCCTCTCTGCCGC
CTTCCTCGTCGACGCCTGGGACTTTTTCACCCGGTTCGAGGAGCACGGCGCGGAGGCGGGCGCCAGCTGGCCGAA
CCTCCGGACGCTCTCCCTCACGTCGCGCCACTTCCGCCGCCTCGGGGCCTCGGCCGAGCGGCTGCTCGAGAAGGC
CGGCACGGGAGCCATGGCGATGCCGAGGCTCGAGGCCATGGAGCTGTGGACGTCGGGCGAGGGAGAGGCCCGGGT
CTTCCAGTTCCAGGCCCGGGGCCCCGGAGGACGAGGCCCTCGGGCCTTGTGGTGGGCGGAACGGGGCGGCGGCCC
CCGCTTGAACCCCTCGGGCCAGTGCAGGGCCGCGTGGACGGGCGTCTTCCGACGAAGCGCCCGGCCCGGCCAGGC
CCGGCCCGAGTTCGATTTGCAGCAGCGGTGGCTGCCCGAGTACGTGTCCGGGTCGGACGAGCACGCGACCCTTCT
CCGACATCTTGTGCTGGGACGCGAGATGCTGCACCCGCTGTCGTACTACCAGCTGATGTGGGAGGGAGACCATGA
AGGGCATGGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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