Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2480
Gene name
LocationContig_1597:4447..5404
Strand+
Gene length (bp)957
Transcript length (bp)567
Coding sequence length (bp)567
Protein length (aa) 189

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00013 KH_1 KH domain 1.1E-16 30 93

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2 30 151 4.0E-13
sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus GN=Khsrp PE=1 SV=1 33 151 2.0E-11
sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp PE=1 SV=2 33 151 2.0E-11
sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 33 151 2.0E-11
sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP PE=1 SV=1 33 151 7.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2 30 151 4.0E-13
sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus GN=Khsrp PE=1 SV=1 33 151 2.0E-11
sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp PE=1 SV=2 33 151 2.0E-11
sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 33 151 2.0E-11
sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP PE=1 SV=1 33 151 7.0E-11
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1 PE=1 SV=1 33 151 1.0E-10
sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3 33 151 1.0E-10
sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus GN=Fubp1 PE=1 SV=1 33 151 2.0E-10
sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2 30 150 2.0E-09
sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3 30 150 7.0E-09
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1 PE=1 SV=1 30 150 7.0E-09
sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus GN=Fubp1 PE=1 SV=1 30 150 8.0E-09
sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4 30 150 4.0E-08
sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp PE=1 SV=2 30 150 4.0E-08
sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus GN=Khsrp PE=1 SV=1 30 150 4.0E-08
sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP PE=1 SV=1 30 150 6.0E-08
sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh PE=1 SV=1 30 125 6.0E-08
sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH PE=1 SV=2 30 98 1.0E-07
sp|Q9LZ82|BTR1_ARATH Protein BTR1 OS=Arabidopsis thaliana GN=BTR1 PE=1 SV=1 29 149 4.0E-07
sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2 SV=1 23 151 2.0E-06
sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1 PE=2 SV=1 23 151 3.0E-06
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.672 0.6055 0.137 0.0439 0.0966 0.0187 0.0943 0.058 0.0182 0.0004

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2104
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3967
Ophiocordyceps australis map64 (Brazil) OphauB2|2543
Ophiocordyceps camponoti-floridani Ophcf2|04316
Ophiocordyceps camponoti-rufipedis Ophun1|4960
Ophiocordyceps kimflemingae Ophio5|1157
Ophiocordyceps subramaniannii Hirsu2|2480 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2480
MGALNRPQDKSRDANKGGAATLRDGEDHMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPV
NLIGTVESAARAKDLILEIVDSDTRGEGPAIKKAPASGRNDAPVRDLGAGGQDKVNDAIYVPSDAVGMIIGKGGD
SSDPYAQYGGYQNYVALWYQSLMYQQQQQDGGAPAPGA*
Coding >Hirsu2|2480
ATGGGGGCCCTCAACAGACCCCAGGACAAGTCGAGAGACGCGAATAAGGGTGGGGCAGCGACACTACGAGACGGC
GAGGACCACATGCAGATCATGGTCCCGGATCGCACTGTAGGTCTGATCATTGGTCGTGGCGGCGAGACCATTCGT
GACTTGCAGGAGAGGTCTGGATGTCACATCAACATTGTCGGAGAGTCGAAGAGCGTCAACGGCTTACGACCCGTG
AACCTGATCGGCACGGTTGAGTCCGCCGCGCGAGCAAAGGATCTGATATTGGAAATCGTGGACAGCGACACCCGT
GGCGAAGGCCCTGCTATCAAGAAGGCGCCCGCGAGCGGGCGCAACGACGCGCCGGTGAGGGACCTCGGCGCCGGT
GGCCAGGATAAGGTCAACGACGCTATCTACGTCCCCTCCGATGCCGTCGGTATGATCATCGGCAAGGGAGGCGAC
TCTTCGGACCCCTACGCCCAATATGGAGGGTACCAGAATTATGTCGCGCTCTGGTACCAATCTTTGATGTACCAA
CAGCAGCAGCAGGACGGCGGAGCGCCGGCCCCTGGAGCCTAG
Transcript >Hirsu2|2480
ATGGGGGCCCTCAACAGACCCCAGGACAAGTCGAGAGACGCGAATAAGGGTGGGGCAGCGACACTACGAGACGGC
GAGGACCACATGCAGATCATGGTCCCGGATCGCACTGTAGGTCTGATCATTGGTCGTGGCGGCGAGACCATTCGT
GACTTGCAGGAGAGGTCTGGATGTCACATCAACATTGTCGGAGAGTCGAAGAGCGTCAACGGCTTACGACCCGTG
AACCTGATCGGCACGGTTGAGTCCGCCGCGCGAGCAAAGGATCTGATATTGGAAATCGTGGACAGCGACACCCGT
GGCGAAGGCCCTGCTATCAAGAAGGCGCCCGCGAGCGGGCGCAACGACGCGCCGGTGAGGGACCTCGGCGCCGGT
GGCCAGGATAAGGTCAACGACGCTATCTACGTCCCCTCCGATGCCGTCGGTATGATCATCGGCAAGGGAGGCGAC
TCTTCGGACCCCTACGCCCAATATGGAGGGTACCAGAATTATGTCGCGCTCTGGTACCAATCTTTGATGTACCAA
CAGCAGCAGCAGGACGGCGGAGCGCCGGCCCCTGGAGCCTAG
Gene >Hirsu2|2480
ATGGGGGCCCTCAACAGACCCCAGGACAAGTCGAGAGACGCGAATAAGGGTGGGGCAGCGACACTACGAGACGGC
GAGGACCACATGCAGATCATGGTCCCGGATCGCACTGTAGGTCTGATCATTGGTCGTGGCGGCGAGACCATTCGT
GACTTGCAGGAGAGGTCTGGATGTCACATCAACATTGTCGGAGAGTCGAAGAGCGTCAACGGCTTACGACCCGTG
AACCTGATCGGCACGGTTGAGTCCGCCGCGCGAGCAAAGGATCTGATATTGGAAATCGTGGACAGCGACACCCGT
GGCGAAGGCCCTGCTATCAAGAAGGCGCCCGCGAGCGGGCGCAACGACGCGCCGGTGAGGGACCTCGGCGCCGGT
GGCCAGGATAAGGTCAACGACGCTATCTACGTCCCCTCCGATGCCGTCGGTATGATCATCGGCAAGGGAGGTGAG
ACCATCCGGGAGATGCAGAACGGGACCGGATGCAAGATCAACGTAGCGCAGTCGTCTGGGCCGGGAGAGATTCAG
AGAGAGATTGCTCTGATTGGAACTCGGGATAGCGTTCTTCGTGCCAAGCAGGCTATTGACGAGAAAGTCGAGGCA
GTGGTAGGTGACAGACAGGCCCATTTCTTGTCTTGCTGTCTGCTGACCGCTTATGCAGCGACAGAAGAGTGGCGG
TGGTGGTGGTGGCGGCGGCGGCCGAGGCCGTGGACACCAGGATCTTGACGGGACTCCCTATTCGCAACCGGGCAC
AAACGCGTCTACTAACCAAACAGGCCAAGCAGGCGACTCTTCGGACCCCTACGCCCAATGTGAGCATCCCTATGC
CTGCATATTTCCAAACCCGAAGCTGACTGGTGCTCAGATGGAGGGTACCAGAATTATGTCGCGCTCTGGTACCAA
TCTTTGATGTACCAACAGCAGCAGCAGGACGGCGGAGCGCCGGCCCCTGGAGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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