© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|248 |
| Gene name | |
| Location | Contig_1045:30..954 |
| Strand | - |
| Gene length (bp) | 924 |
| Transcript length (bp) | 756 |
| Coding sequence length (bp) | 756 |
| Protein length (aa) | 252 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06687 | SUR7 | SUR7/PalI family | 6.7E-27 | 9 | 203 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07651|FMP45_YEAST | SUR7 family protein FMP45 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP45 PE=1 SV=1 | 22 | 203 | 2.0E-19 |
| sp|Q5A4M8|SUR7_CANAL | Protein SUR7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SUR7 PE=1 SV=1 | 10 | 199 | 2.0E-18 |
| sp|P54003|SUR7_YEAST | Protein SUR7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR7 PE=1 SV=1 | 17 | 242 | 5.0E-15 |
| sp|P40169|YNT4_YEAST | Uncharacterized plasma membrane protein YNL194C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL194C PE=1 SV=1 | 9 | 203 | 3.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005886 | plasma membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 26 | 22 |
| 2 | 113 | 135 | 22 |
| 3 | 140 | 162 | 22 |
| 4 | 183 | 205 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|248 MKNIPAGMVGLVLMAVSIMFLWWVILSGVTSSTPIRHVYFLRADTSGIDGARDVSQWNYWFICGYKNRDCGDTYA APPFGYAWNANANNVPDGLGGRHGHHTTSYHMYYMWRFGWVFLLMTLFFEHLALFASLVACCGRLGAAVASFMCY IALFWYTLAVSIITAVFCQARHRFHRAGRSARIGAWCFGFLWASYAGLLFASILFSFGIRRGKEAAVATGASRGR TGGGMWRRRSNRSQSYDGRRVKEEYS* |
| Coding | >Hirsu2|248 ATGAAGAACATCCCCGCCGGCATGGTGGGCCTCGTCCTGATGGCCGTCTCCATCATGTTCCTGTGGTGGGTCATC CTGTCGGGCGTGACGAGCTCGACGCCCATCCGACACGTCTACTTCCTGCGCGCCGACACCAGCGGCATCGACGGC GCCCGCGACGTCTCGCAGTGGAACTACTGGTTCATCTGCGGCTACAAGAACCGCGACTGCGGCGACACGTACGCC GCCCCGCCCTTCGGCTACGCCTGGAATGCCAACGCCAACAACGTGCCGGACGGCCTCGGCGGCCGCCACGGCCAC CACACCACCTCGTACCACATGTACTACATGTGGCGCTTCGGCTGGGTCTTCCTCCTCATGACCCTCTTCTTCGAG CACCTGGCCCTGTTCGCCAGCCTCGTCGCCTGCTGCGGCCGCCTCGGCGCCGCCGTCGCCTCCTTCATGTGCTAC ATCGCCCTCTTCTGGTACACGCTCGCCGTCTCCATCATCACTGCCGTCTTCTGCCAGGCCCGCCACCGCTTCCAC AGGGCCGGCCGCAGCGCCCGCATCGGCGCCTGGTGCTTCGGCTTCCTGTGGGCCTCGTACGCCGGCCTGCTCTTC GCCTCCATCCTCTTCAGCTTCGGCATCCGCCGCGGCAAGGAGGCCGCCGTCGCCACGGGCGCCTCGCGCGGCCGC ACCGGCGGCGGCATGTGGCGCCGCCGCAGTAACCGCAGCCAGTCGTACGACGGCCGCCGCGTCAAGGAGGAGTAC TCGTAA |
| Transcript | >Hirsu2|248 ATGAAGAACATCCCCGCCGGCATGGTGGGCCTCGTCCTGATGGCCGTCTCCATCATGTTCCTGTGGTGGGTCATC CTGTCGGGCGTGACGAGCTCGACGCCCATCCGACACGTCTACTTCCTGCGCGCCGACACCAGCGGCATCGACGGC GCCCGCGACGTCTCGCAGTGGAACTACTGGTTCATCTGCGGCTACAAGAACCGCGACTGCGGCGACACGTACGCC GCCCCGCCCTTCGGCTACGCCTGGAATGCCAACGCCAACAACGTGCCGGACGGCCTCGGCGGCCGCCACGGCCAC CACACCACCTCGTACCACATGTACTACATGTGGCGCTTCGGCTGGGTCTTCCTCCTCATGACCCTCTTCTTCGAG CACCTGGCCCTGTTCGCCAGCCTCGTCGCCTGCTGCGGCCGCCTCGGCGCCGCCGTCGCCTCCTTCATGTGCTAC ATCGCCCTCTTCTGGTACACGCTCGCCGTCTCCATCATCACTGCCGTCTTCTGCCAGGCCCGCCACCGCTTCCAC AGGGCCGGCCGCAGCGCCCGCATCGGCGCCTGGTGCTTCGGCTTCCTGTGGGCCTCGTACGCCGGCCTGCTCTTC GCCTCCATCCTCTTCAGCTTCGGCATCCGCCGCGGCAAGGAGGCCGCCGTCGCCACGGGCGCCTCGCGCGGCCGC ACCGGCGGCGGCATGTGGCGCCGCCGCAGTAACCGCAGCCAGTCGTACGACGGCCGCCGCGTCAAGGAGGAGTAC TCGTAA |
| Gene | >Hirsu2|248 ATGAAGAGTGAGTCGATCGCGCGTGCCTCTCGGACCGTCCGCCGGCTTCCTTGGGCTGACCCGGCCTGTCCGTCC GTTTCGCAGACATCCCCGCCGGCATGGTGGGCCTCGTCCTGATGGCCGTCTCCATCATGTTCCTGTGGTGGGTCA TCCTGTCGGGCGTGACGAGCTCGACGCCCATCCGACACGTCTACTTCCTGCGCGCCGACACCAGCGGCATCGACG GCGCCCGCGACGTCTCGCAGTGGAACTACTGGTTCATCTGCGGCTACAAGAACCGCGACTGCGGCGACACGTACG CCGCCCCGCCCTTCGGCTACGCCTGGAATGCCAACGCCAACAACGTGCCGGACGGCCTCGGCGGCCGCCACGGCC ACCACACCACCTCGTACCACATGTACTACATGTGGCGCTTCGGCTGGGTCTTCCTCCTCATGACCCTCTTCTTCG AGCACCTGGCCCTGTTCGCCAGCCTCGTCGCCTGCTGCGGCCGCCTCGGCGCCGCCGTCGCCTCCTTCATGTGCT ACATCGCCCTCTTCTGGTACACGCTCGCCGTCTCCATCATCACGTACGTTGTGCCCCCCCCCCCCCCTCTTTCCT CCTCGCCCACGTCCGCCGGAGATGATGGTGGTAGCGGTAGCTGACGCCGTCCGCAACAGTGCCGTCTTCTGCCAG GCCCGCCACCGCTTCCACAGGGCCGGCCGCAGCGCCCGCATCGGCGCCTGGTGCTTCGGCTTCCTGTGGGCCTCG TACGCCGGCCTGCTCTTCGCCTCCATCCTCTTCAGCTTCGGCATCCGCCGCGGCAAGGAGGCCGCCGTCGCCACG GGCGCCTCGCGCGGCCGCACCGGCGGCGGCATGTGGCGCCGCCGCAGTAACCGCAGCCAGTCGTACGACGGCCGC CGCGTCAAGGAGGAGTACTCGTAA |