Protein ID | Hirsu2|2472 |
Gene name | |
Location | Contig_1594:4145..5092 |
Strand | - |
Gene length (bp) | 947 |
Transcript length (bp) | 657 |
Coding sequence length (bp) | 657 |
Protein length (aa) | 219 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00579 | tRNA-synt_1b | tRNA synthetases class I (W and Y) | 9.6E-27 | 28 | 154 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q7NCG8|SYW_GLOVI | Tryptophan--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421) GN=trpS PE=3 SV=1 | 29 | 218 | 1.0E-35 |
sp|Q7MAE0|SYW_WOLSU | Tryptophan--tRNA ligase OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=trpS PE=3 SV=1 | 33 | 218 | 5.0E-35 |
sp|Q8CJX0|SYW1_STRCO | Tryptophan--tRNA ligase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=trpS1 PE=3 SV=1 | 26 | 218 | 1.0E-33 |
sp|Q86A90|SYWM_DICDI | Tryptophan--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=wars2 PE=3 SV=1 | 36 | 218 | 5.0E-33 |
sp|Q8YXE4|SYW_NOSS1 | Tryptophan--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trpS PE=3 SV=1 | 1 | 217 | 2.0E-32 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q7NCG8|SYW_GLOVI | Tryptophan--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421) GN=trpS PE=3 SV=1 | 29 | 218 | 1.0E-35 |
sp|Q7MAE0|SYW_WOLSU | Tryptophan--tRNA ligase OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=trpS PE=3 SV=1 | 33 | 218 | 5.0E-35 |
sp|Q8CJX0|SYW1_STRCO | Tryptophan--tRNA ligase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=trpS1 PE=3 SV=1 | 26 | 218 | 1.0E-33 |
sp|Q86A90|SYWM_DICDI | Tryptophan--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=wars2 PE=3 SV=1 | 36 | 218 | 5.0E-33 |
sp|Q8YXE4|SYW_NOSS1 | Tryptophan--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trpS PE=3 SV=1 | 1 | 217 | 2.0E-32 |
sp|P04803|SYWM_YEAST | Tryptophan--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSW1 PE=1 SV=2 | 32 | 218 | 7.0E-32 |
sp|Q8DHG3|SYW_THEEB | Tryptophan--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1) GN=trpS PE=3 SV=1 | 1 | 218 | 4.0E-31 |
sp|P21656|SYW_BACSU | Tryptophan--tRNA ligase OS=Bacillus subtilis (strain 168) GN=trpS PE=1 SV=2 | 36 | 218 | 5.0E-31 |
sp|Q9CYK1|SYWM_MOUSE | Tryptophan--tRNA ligase, mitochondrial OS=Mus musculus GN=Wars2 PE=1 SV=2 | 35 | 218 | 2.0E-30 |
sp|Q92HR1|SYW_RICCN | Tryptophan--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=trpS PE=3 SV=1 | 35 | 218 | 2.0E-30 |
sp|Q9AC05|SYW_CAUCR | Tryptophan--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=trpS PE=3 SV=1 | 35 | 218 | 5.0E-30 |
sp|P43835|SYW_HAEIN | Tryptophan--tRNA ligase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=trpS PE=3 SV=1 | 30 | 218 | 7.0E-30 |
sp|Q8XMQ5|SYW_CLOPE | Tryptophan--tRNA ligase OS=Clostridium perfringens (strain 13 / Type A) GN=trpS PE=3 SV=1 | 6 | 218 | 1.0E-29 |
sp|Q8ERU2|SYW_OCEIH | Tryptophan--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=trpS PE=3 SV=1 | 37 | 218 | 1.0E-29 |
sp|Q81TS6|SYW_BACAN | Tryptophan--tRNA ligase OS=Bacillus anthracis GN=trpS PE=3 SV=1 | 36 | 218 | 3.0E-29 |
sp|Q9UGM6|SYWM_HUMAN | Tryptophan--tRNA ligase, mitochondrial OS=Homo sapiens GN=WARS2 PE=1 SV=1 | 35 | 218 | 3.0E-29 |
sp|Q4UL98|SYW_RICFE | Tryptophan--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=trpS PE=3 SV=1 | 35 | 218 | 5.0E-29 |
sp|Q8R9X8|SYW_CALS4 | Tryptophan--tRNA ligase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=trpS PE=3 SV=1 | 4 | 218 | 5.0E-29 |
sp|P00953|SYW_GEOSE | Tryptophan--tRNA ligase OS=Geobacillus stearothermophilus GN=trpS PE=1 SV=1 | 18 | 218 | 6.0E-29 |
sp|Q7VIP6|SYW_HELHP | Tryptophan--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) GN=trpS PE=3 SV=1 | 33 | 218 | 9.0E-29 |
sp|Q9K8Y2|SYW_BACHD | Tryptophan--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=trpS PE=3 SV=1 | 37 | 218 | 1.0E-28 |
sp|P57956|SYW_PASMU | Tryptophan--tRNA ligase OS=Pasteurella multocida (strain Pm70) GN=trpS PE=3 SV=1 | 33 | 218 | 2.0E-28 |
sp|O42875|SYWM_SCHPO | Tryptophan--tRNA ligase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=msw1 PE=3 SV=1 | 30 | 218 | 3.0E-28 |
sp|Q8ZJF2|SYW_YERPE | Tryptophan--tRNA ligase OS=Yersinia pestis GN=trpS PE=1 SV=2 | 33 | 218 | 4.0E-28 |
sp|Q8EK12|SYW_SHEON | Tryptophan--tRNA ligase OS=Shewanella oneidensis (strain MR-1) GN=trpS PE=3 SV=1 | 31 | 218 | 5.0E-28 |
sp|Q89W91|SYW_BRADU | Tryptophan--tRNA ligase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=trpS PE=3 SV=1 | 35 | 218 | 5.0E-28 |
sp|Q9ZD76|SYW_RICPR | Tryptophan--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E) GN=trpS PE=3 SV=1 | 35 | 218 | 6.0E-28 |
sp|Q87L13|SYW_VIBPA | Tryptophan--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=trpS PE=3 SV=1 | 4 | 218 | 7.0E-28 |
sp|Q9ZJX4|SYW_HELPJ | Tryptophan--tRNA ligase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=trpS PE=3 SV=1 | 33 | 218 | 1.0E-27 |
sp|Q7VPB2|SYW_HAEDU | Tryptophan--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=trpS PE=3 SV=1 | 33 | 218 | 1.0E-27 |
sp|Q7VBM9|SYW_PROMA | Tryptophan--tRNA ligase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=trpS PE=3 SV=1 | 4 | 218 | 1.0E-27 |
sp|Q83JA5|SYW_SHIFL | Tryptophan--tRNA ligase OS=Shigella flexneri GN=trpS PE=3 SV=1 | 33 | 218 | 2.0E-27 |
sp|P0A2P2|SYW_SALTY | Tryptophan--tRNA ligase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=trpS PE=3 SV=1 | 33 | 218 | 3.0E-27 |
sp|P0A2P3|SYW_SALTI | Tryptophan--tRNA ligase OS=Salmonella typhi GN=trpS PE=3 SV=1 | 33 | 218 | 3.0E-27 |
sp|Q3T099|SYWM_BOVIN | Tryptophan--tRNA ligase, mitochondrial OS=Bos taurus GN=WARS2 PE=2 SV=1 | 35 | 218 | 3.0E-27 |
sp|Q82E91|SYW2_STRAW | Tryptophan--tRNA ligase 2 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=trpS2 PE=3 SV=1 | 30 | 218 | 4.0E-27 |
sp|P56396|SYW_HELPY | Tryptophan--tRNA ligase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=trpS PE=3 SV=2 | 33 | 218 | 4.0E-27 |
sp|P00954|SYW_ECOLI | Tryptophan--tRNA ligase OS=Escherichia coli (strain K12) GN=trpS PE=1 SV=3 | 33 | 218 | 4.0E-27 |
sp|P67588|SYW_ECOL6 | Tryptophan--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=trpS PE=3 SV=1 | 33 | 218 | 4.0E-27 |
sp|P67589|SYW_ECO57 | Tryptophan--tRNA ligase OS=Escherichia coli O157:H7 GN=trpS PE=3 SV=1 | 33 | 218 | 4.0E-27 |
sp|P73655|SYW_SYNY3 | Tryptophan--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trpS PE=3 SV=2 | 4 | 218 | 4.0E-27 |
sp|P46579|SYWM_CAEEL | Tryptophan--tRNA ligase, mitochondrial OS=Caenorhabditis elegans GN=wars-2 PE=2 SV=3 | 4 | 218 | 5.0E-27 |
sp|Q8DCT6|SYW_VIBVU | Tryptophan--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=trpS PE=3 SV=1 | 4 | 218 | 6.0E-27 |
sp|Q891C7|SYW_CLOTE | Tryptophan--tRNA ligase OS=Clostridium tetani (strain Massachusetts / E88) GN=trpS PE=3 SV=1 | 30 | 218 | 7.0E-27 |
sp|Q7V286|SYW_PROMP | Tryptophan--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpS PE=3 SV=1 | 4 | 218 | 7.0E-27 |
sp|Q8D1X5|SYW_WIGBR | Tryptophan--tRNA ligase OS=Wigglesworthia glossinidia brevipalpis GN=trpS PE=3 SV=1 | 35 | 218 | 7.0E-27 |
sp|Q7MH15|SYW_VIBVY | Tryptophan--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=trpS PE=3 SV=1 | 4 | 218 | 8.0E-27 |
sp|Q929H5|SYW_LISIN | Tryptophan--tRNA ligase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=trpS PE=3 SV=1 | 36 | 218 | 9.0E-27 |
sp|Q68WR2|SYW_RICTY | Tryptophan--tRNA ligase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=trpS PE=3 SV=1 | 35 | 218 | 1.0E-26 |
sp|Q9KZA7|SYW2_STRCO | Tryptophan--tRNA ligase 2 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=trpS2 PE=3 SV=1 | 32 | 218 | 1.0E-26 |
sp|Q9KNV7|SYW_VIBCH | Tryptophan--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=trpS PE=1 SV=2 | 30 | 218 | 2.0E-26 |
sp|Q97LD6|SYW_CLOAB | Tryptophan--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=trpS PE=3 SV=2 | 36 | 218 | 2.0E-26 |
sp|Q9EYY6|SYW_ENTAE | Tryptophan--tRNA ligase OS=Enterobacter aerogenes GN=trpS PE=3 SV=1 | 33 | 218 | 3.0E-26 |
sp|Q8Y577|SYW_LISMO | Tryptophan--tRNA ligase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=trpS PE=3 SV=1 | 5 | 218 | 4.0E-26 |
sp|Q7NA61|SYW_PHOLL | Tryptophan--tRNA ligase OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=trpS PE=3 SV=1 | 33 | 218 | 6.0E-26 |
sp|Q71XG7|SYW_LISMF | Tryptophan--tRNA ligase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=trpS PE=3 SV=1 | 36 | 218 | 8.0E-26 |
sp|Q830U2|SYW_ENTFA | Tryptophan--tRNA ligase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=trpS PE=3 SV=1 | 36 | 218 | 9.0E-26 |
sp|Q82HU1|SYW1_STRAW | Tryptophan--tRNA ligase 1 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=trpS1 PE=3 SV=1 | 32 | 218 | 1.0E-25 |
sp|Q5E2G5|SYW_VIBF1 | Tryptophan--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=trpS PE=3 SV=1 | 31 | 218 | 1.0E-25 |
sp|Q83FN1|SYW_TROWT | Tryptophan--tRNA ligase OS=Tropheryma whipplei (strain Twist) GN=trpS PE=3 SV=1 | 36 | 218 | 2.0E-25 |
sp|Q83HC3|SYW_TROW8 | Tryptophan--tRNA ligase OS=Tropheryma whipplei (strain TW08/27) GN=trpS PE=3 SV=1 | 33 | 218 | 2.0E-25 |
sp|Q1RIE3|SYW_RICBR | Tryptophan--tRNA ligase OS=Rickettsia bellii (strain RML369-C) GN=trpS PE=3 SV=1 | 35 | 218 | 3.0E-25 |
sp|Q6AGQ7|SYW_LEIXX | Tryptophan--tRNA ligase OS=Leifsonia xyli subsp. xyli (strain CTCB07) GN=trpS PE=3 SV=1 | 35 | 218 | 3.0E-25 |
sp|Q8K941|SYW_BUCAP | Tryptophan--tRNA ligase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=trpS PE=3 SV=1 | 33 | 216 | 4.0E-25 |
sp|Q8RXE9|SYWM_ARATH | Tryptophan--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA4 PE=1 SV=1 | 35 | 217 | 7.0E-25 |
sp|Q5HQH4|SYW_STAEQ | Tryptophan--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-24 |
sp|P9WFT3|SYW_MYCTU | Tryptophan--tRNA ligase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=trpS PE=1 SV=1 | 35 | 218 | 1.0E-24 |
sp|P9WFT2|SYW_MYCTO | Tryptophan--tRNA ligase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=trpS PE=3 SV=1 | 35 | 218 | 1.0E-24 |
sp|P67591|SYW_MYCBO | Tryptophan--tRNA ligase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=trpS PE=3 SV=1 | 35 | 218 | 1.0E-24 |
sp|Q8CT69|SYW_STAES | Tryptophan--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-24 |
sp|Q7TV34|SYW_PROMM | Tryptophan--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpS PE=3 SV=1 | 4 | 218 | 2.0E-24 |
sp|Q6GI89|SYW_STAAR | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain MRSA252) GN=trpS PE=3 SV=1 | 36 | 218 | 4.0E-24 |
sp|Q7W5T6|SYW_BORPA | Tryptophan--tRNA ligase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) GN=trpS PE=3 SV=1 | 4 | 218 | 4.0E-24 |
sp|Q7WGI7|SYW_BORBR | Tryptophan--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) GN=trpS PE=3 SV=1 | 4 | 218 | 4.0E-24 |
sp|Q7VZ05|SYW_BORPE | Tryptophan--tRNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=trpS PE=3 SV=1 | 4 | 218 | 7.0E-24 |
sp|Q7VRN5|SYW_BLOFL | Tryptophan--tRNA ligase OS=Blochmannia floridanus GN=trpS PE=3 SV=1 | 31 | 218 | 8.0E-24 |
sp|P67594|SYW_STAAW | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain MW2) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|Q6GAT0|SYW_STAAS | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain MSSA476) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|P67593|SYW_STAAN | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain N315) GN=trpS PE=1 SV=1 | 36 | 218 | 1.0E-23 |
sp|P67592|SYW_STAAM | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|Q5HH88|SYW_STAAC | Tryptophan--tRNA ligase OS=Staphylococcus aureus (strain COL) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|Q8EVV1|SYW_MYCPE | Tryptophan--tRNA ligase OS=Mycoplasma penetrans (strain HF-2) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|Q8NSJ4|SYW_CORGL | Tryptophan--tRNA ligase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-23 |
sp|P67587|SYW_BRUSU | Tryptophan--tRNA ligase OS=Brucella suis biovar 1 (strain 1330) GN=trpS PE=3 SV=1 | 35 | 217 | 2.0E-23 |
sp|P67586|SYW_BRUME | Tryptophan--tRNA ligase OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=trpS PE=3 SV=1 | 35 | 217 | 2.0E-23 |
sp|Q49901|SYW_MYCLE | Tryptophan--tRNA ligase OS=Mycobacterium leprae (strain TN) GN=trpS PE=3 SV=1 | 35 | 218 | 3.0E-23 |
sp|Q9PQW8|SYW_UREPA | Tryptophan--tRNA ligase OS=Ureaplasma parvum serovar 3 (strain ATCC 700970) GN=trpS PE=3 SV=1 | 36 | 148 | 4.0E-23 |
sp|P57602|SYW_BUCAI | Tryptophan--tRNA ligase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=trpS PE=3 SV=1 | 26 | 218 | 6.0E-23 |
sp|Q8UIE8|SYW_AGRFC | Tryptophan--tRNA ligase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=trpS PE=3 SV=2 | 32 | 218 | 7.0E-23 |
sp|Q98C31|SYW_RHILO | Tryptophan--tRNA ligase OS=Rhizobium loti (strain MAFF303099) GN=trpS PE=3 SV=1 | 35 | 218 | 2.0E-22 |
sp|Q8FRR3|SYW_COREF | Tryptophan--tRNA ligase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=trpS PE=3 SV=1 | 36 | 218 | 3.0E-22 |
sp|Q7MT94|SYW_PORGI | Tryptophan--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=trpS PE=3 SV=1 | 19 | 218 | 9.0E-21 |
sp|Q92SI9|SYW_RHIME | Tryptophan--tRNA ligase OS=Rhizobium meliloti (strain 1021) GN=trpS PE=3 SV=1 | 35 | 218 | 1.0E-20 |
sp|Q98PH7|SYW_MYCPU | Tryptophan--tRNA ligase OS=Mycoplasma pulmonis (strain UAB CTIP) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-20 |
sp|Q7TTU9|SYW_SYNPX | Tryptophan--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=trpS PE=3 SV=1 | 4 | 218 | 3.0E-20 |
sp|Q87WW4|SYW_PSESM | Tryptophan--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=trpS PE=3 SV=1 | 31 | 218 | 3.0E-20 |
sp|P59466|SYW_BUCBP | Tryptophan--tRNA ligase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=trpS PE=3 SV=1 | 27 | 218 | 9.0E-19 |
sp|Q9CJD1|SYW_LACLA | Tryptophan--tRNA ligase OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=trpS PE=3 SV=1 | 17 | 218 | 4.0E-18 |
sp|O83640|SYW_TREPA | Tryptophan--tRNA ligase OS=Treponema pallidum (strain Nichols) GN=trpS PE=3 SV=1 | 18 | 218 | 7.0E-18 |
sp|Q88NA1|SYW_PSEPK | Tryptophan--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=trpS PE=3 SV=1 | 31 | 218 | 1.0E-17 |
sp|Q9JYQ9|SYW_NEIMB | Tryptophan--tRNA ligase OS=Neisseria meningitidis serogroup B (strain MC58) GN=trpS PE=3 SV=1 | 33 | 218 | 4.0E-17 |
sp|Q9Z7A4|SYW_CHLPN | Tryptophan--tRNA ligase OS=Chlamydia pneumoniae GN=trpS PE=3 SV=1 | 33 | 218 | 1.0E-16 |
sp|Q8DRR1|SYW_STRMU | Tryptophan--tRNA ligase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=trpS PE=3 SV=1 | 17 | 218 | 2.0E-16 |
sp|O84589|SYW_CHLTR | Tryptophan--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trpS PE=3 SV=1 | 13 | 218 | 2.0E-16 |
sp|Q821H9|SYW_CHLCV | Tryptophan--tRNA ligase OS=Chlamydophila caviae (strain GPIC) GN=trpS PE=3 SV=1 | 33 | 218 | 3.0E-16 |
sp|Q5HW79|SYW_CAMJR | Tryptophan--tRNA ligase OS=Campylobacter jejuni (strain RM1221) GN=trpS PE=3 SV=1 | 36 | 218 | 4.0E-16 |
sp|Q9PIB4|SYW_CAMJE | Tryptophan--tRNA ligase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=trpS PE=1 SV=1 | 36 | 218 | 4.0E-16 |
sp|Q9HVX6|SYW_PSEAE | Tryptophan--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=trpS PE=3 SV=1 | 31 | 218 | 1.0E-15 |
sp|Q9JTQ0|SYW_NEIMA | Tryptophan--tRNA ligase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=trpS PE=3 SV=1 | 33 | 218 | 2.0E-15 |
sp|Q9PJF5|SYW_CHLMU | Tryptophan--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trpS PE=3 SV=1 | 13 | 218 | 2.0E-15 |
sp|Q99XH4|SYW_STRP1 | Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M1 GN=trpS PE=3 SV=1 | 17 | 218 | 5.0E-15 |
sp|Q7NAT8|SYW_MYCGA | Tryptophan--tRNA ligase OS=Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) GN=trpS PE=3 SV=1 | 32 | 145 | 5.0E-15 |
sp|P75510|SYW_MYCPN | Tryptophan--tRNA ligase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=trpS PE=1 SV=1 | 36 | 191 | 6.0E-15 |
sp|Q9WYW2|SYW_THEMA | Tryptophan--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=trpS PE=1 SV=1 | 36 | 218 | 6.0E-15 |
sp|P0DG61|SYW_STRPQ | Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=trpS PE=3 SV=1 | 17 | 218 | 9.0E-15 |
sp|P67598|SYW_STRP8 | Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=trpS PE=3 SV=1 | 17 | 218 | 9.0E-15 |
sp|Q5X9A2|SYW_STRP6 | Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=trpS PE=3 SV=2 | 17 | 218 | 9.0E-15 |
sp|P0DG60|SYW_STRP3 | Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=trpS PE=3 SV=1 | 17 | 218 | 9.0E-15 |
sp|Q8PFH5|SYW_XANAC | Tryptophan--tRNA ligase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=trpS PE=3 SV=1 | 36 | 218 | 9.0E-15 |
sp|P67596|SYW_STRR6 | Tryptophan--tRNA ligase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=trpS PE=3 SV=1 | 8 | 218 | 1.0E-14 |
sp|P67595|SYW_STRPN | Tryptophan--tRNA ligase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=trpS PE=3 SV=1 | 8 | 218 | 1.0E-14 |
sp|Q8DWP7|SYW_STRA5 | Tryptophan--tRNA ligase OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) GN=trpS PE=3 SV=1 | 17 | 218 | 3.0E-14 |
sp|Q8E2J5|SYW_STRA3 | Tryptophan--tRNA ligase OS=Streptococcus agalactiae serotype III (strain NEM316) GN=trpS PE=3 SV=1 | 17 | 218 | 3.0E-14 |
sp|P47372|SYW_MYCGE | Tryptophan--tRNA ligase OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=trpS PE=3 SV=1 | 36 | 218 | 4.0E-14 |
sp|Q46127|SYW_CLOLO | Tryptophan--tRNA ligase OS=Clostridium longisporum GN=trpS PE=3 SV=1 | 14 | 218 | 7.0E-14 |
sp|Q8P3Z4|SYW_XANCP | Tryptophan--tRNA ligase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=trpS PE=3 SV=1 | 36 | 218 | 8.0E-14 |
sp|Q9RWV7|SYW_DEIRA | Tryptophan--tRNA ligase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=trpS PE=3 SV=1 | 36 | 218 | 1.0E-13 |
sp|Q9RVD6|SYW2_DEIRA | Tryptophan--tRNA ligase 2 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=trpS2 PE=1 SV=1 | 17 | 141 | 1.0E-13 |
sp|O51038|SYW_BORBU | Tryptophan--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=trpS PE=3 SV=2 | 36 | 218 | 1.0E-13 |
sp|Q8RGA3|SYW_FUSNN | Tryptophan--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=trpS PE=3 SV=1 | 36 | 218 | 2.0E-13 |
sp|O67115|SYW_AQUAE | Tryptophan--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=trpS PE=3 SV=1 | 23 | 137 | 4.0E-13 |
sp|Q87B10|SYW_XYLFT | Tryptophan--tRNA ligase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=trpS PE=3 SV=1 | 36 | 141 | 8.0E-13 |
sp|Q9PG74|SYW_XYLFA | Tryptophan--tRNA ligase OS=Xylella fastidiosa (strain 9a5c) GN=trpS PE=3 SV=1 | 36 | 141 | 2.0E-12 |
sp|Q7UQA4|SYW_RHOBA | Tryptophan--tRNA ligase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) GN=trpS PE=3 SV=1 | 4 | 218 | 3.0E-11 |
sp|Q8Y0A1|SYW_RALSO | Tryptophan--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000) GN=trpS PE=3 SV=1 | 21 | 81 | 6.0E-10 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004812 | aminoacyl-tRNA ligase activity | Yes |
GO:0006418 | tRNA aminoacylation for protein translation | Yes |
GO:0005524 | ATP binding | Yes |
GO:0000166 | nucleotide binding | Yes |
GO:0043038 | amino acid activation | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0043436 | oxoacid metabolic process | No |
GO:0140101 | catalytic activity, acting on a tRNA | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0009987 | cellular process | No |
GO:0008152 | metabolic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0043039 | tRNA aminoacylation | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0034660 | ncRNA metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0036094 | small molecule binding | No |
GO:0016875 | ligase activity, forming carbon-oxygen bonds | No |
GO:0006082 | organic acid metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:0006520 | cellular amino acid metabolic process | No |
GO:0005488 | binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0008150 | biological_process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0017076 | purine nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0090304 | nucleic acid metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0140098 | catalytic activity, acting on RNA | No |
GO:0044281 | small molecule metabolic process | No |
GO:0032553 | ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0016874 | ligase activity | No |
GO:0140640 | catalytic activity, acting on a nucleic acid | No |
GO:0019752 | carboxylic acid metabolic process | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0044238 | primary metabolic process | No |
GO:0006399 | tRNA metabolic process | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0016070 | RNA metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:1901265 | nucleoside phosphate binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.559 | 0.3414 | 0.0865 | 0.0229 | 0.241 | 0.04 | 0.0818 | 0.1907 | 0.218 | 0.0811 |
Orthofinder run ID | 4 |
Orthogroup | 5014 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2472 MYCICWLLVENDTHKLNLSAVEQLAKRPLGSKLKLGLFAYPVLQAADILVHRATHVPVGHDQQQHLEFARQCVTN FNHSYGPHLVYPETITPSIHRIKSLTHPTLKMSKSHHSERSRILITDTPDDIHTKIASALTDSLPGISYDVDLAA QYSEAQPRQLKILVSDAIIQGLRGIRERYLELINSEPGYLDHVEAQGALKARRSAQETMELVRNAVGL* |
Coding | >Hirsu2|2472 ATGTACTGCATCTGTTGGCTACTTGTCGAGAATGACACACATAAGCTCAACCTGTCAGCGGTAGAACAGTTGGCA AAGAGGCCATTGGGCTCCAAGCTAAAGCTTGGACTCTTCGCGTACCCTGTTCTTCAAGCGGCCGACATCCTCGTT CACAGAGCAACTCACGTCCCCGTGGGACATGATCAGCAGCAGCATCTCGAGTTTGCCCGTCAATGCGTCACCAAC TTCAACCATTCCTATGGGCCCCATCTTGTTTACCCCGAAACCATCACACCCTCGATACATCGCATCAAGTCCCTG ACACATCCGACATTGAAGATGTCAAAATCGCACCACTCTGAACGCTCACGCATCCTAATTACGGATACTCCAGAC GACATTCATACCAAGATCGCCTCCGCATTGACTGACTCCTTGCCCGGCATTTCGTATGATGTTGATCTTGCCGCG CAATACAGCGAGGCTCAGCCGCGTCAACTGAAGATTCTTGTTTCGGATGCAATCATACAGGGTCTGCGAGGAATC CGAGAGCGATATCTAGAGCTCATCAATTCAGAACCCGGATATTTGGACCACGTCGAAGCACAGGGTGCTCTCAAA GCACGGCGAAGCGCTCAGGAAACCATGGAGCTAGTTAGGAACGCAGTAGGCCTGTGA |
Transcript | >Hirsu2|2472 ATGTACTGCATCTGTTGGCTACTTGTCGAGAATGACACACATAAGCTCAACCTGTCAGCGGTAGAACAGTTGGCA AAGAGGCCATTGGGCTCCAAGCTAAAGCTTGGACTCTTCGCGTACCCTGTTCTTCAAGCGGCCGACATCCTCGTT CACAGAGCAACTCACGTCCCCGTGGGACATGATCAGCAGCAGCATCTCGAGTTTGCCCGTCAATGCGTCACCAAC TTCAACCATTCCTATGGGCCCCATCTTGTTTACCCCGAAACCATCACACCCTCGATACATCGCATCAAGTCCCTG ACACATCCGACATTGAAGATGTCAAAATCGCACCACTCTGAACGCTCACGCATCCTAATTACGGATACTCCAGAC GACATTCATACCAAGATCGCCTCCGCATTGACTGACTCCTTGCCCGGCATTTCGTATGATGTTGATCTTGCCGCG CAATACAGCGAGGCTCAGCCGCGTCAACTGAAGATTCTTGTTTCGGATGCAATCATACAGGGTCTGCGAGGAATC CGAGAGCGATATCTAGAGCTCATCAATTCAGAACCCGGATATTTGGACCACGTCGAAGCACAGGGTGCTCTCAAA GCACGGCGAAGCGCTCAGGAAACCATGGAGCTAGTTAGGAACGCAGTAGGCCTGTGA |
Gene | >Hirsu2|2472 ATGTACTGCATCTGTTGGCTACTTGTCGAGAATGACACAGTGGAAGGCCAGTACACTAGTCTCTGTCTCTCTTCA AGGAGCTCGACTAACTTCTGGTATAGCATAAGCTCAACCTGTCAGCGGTAGAACAGTTGGCAAAGAGGCCATTGG GCTCCAAGCTAAAGCTTGGACTCTTCGCGTACCCTGTTCTTCAAGCGGCCGACATCCTCGTTCACAGGTAACAGA CATATCGCTCTCTTTTCTGTTCGTTCCGGCTGATTATTTCATCCTTGCGGCAAGAGCAACTCACGTCCCCGTGGG ACATGATCAGCAGCAGCATCTCGAGTTTGCCCGTCAATGCGTCACCAACTTCAACCATTCCTATGGGCCCCATCT TGTTTACCCCGAAACCATCACACGTAAGCAACTCATTCGCTCTCACCTGTCTCGGGAGCTACGCGGGACCAAGTA GCAAAACAGAGGTCCTGCGGTCTCACTGACTCGTGAGAATAGCCTCGATACATCGCATCAAGTCCCTGACACATC CGACATTGAAGATGTCAAAATCGCACCACTCTGAACGCTCACGCATCCTAATTACGGATACTCCAGACGACATTC ATACCAAGATCGCCTCCGCATTGACTGACTCCTTGCCCGGCATTTCGTATGATGTTGATGTGAGGCCTGGTATAT CCAATCTGCTAGACGTTCTCTCTATCTTTGATGACCAGCGACGAACCTCAAAACAGCTTGCCGCGCAATACAGCG AGGCTCAGCCGCGTCAACTGAAGATTCTTGTTTCGGATGCAATCATACAGGGTCTGCGAGGAATCCGAGAGCGAT ATCTAGAGCTCATCAATTCAGAACCCGGATATTTGGACCACGTCGAAGCACAGGGTGCTCTCAAAGCACGGCGAA GCGCTCAGGAAACCATGGAGCTAGTTAGGAACGCAGTAGGCCTGTGA |