© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2470 |
| Gene name | |
| Location | Contig_1593:4668..5724 |
| Strand | - |
| Gene length (bp) | 1056 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00890 | FAD_binding_2 | FAD binding domain | 1.5E-51 | 3 | 326 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A0R4H4|Y5835_MYCS2 | KsdD-like steroid dehydrogenase MSMEG_5835 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_5835 PE=1 SV=1 | 4 | 332 | 2.0E-119 |
| sp|Q7D9A2|Y0809_MYCTO | KsdD-like steroid dehydrogenase MT0809 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0809 PE=3 SV=1 | 4 | 345 | 3.0E-115 |
| sp|P71838|Y0785_MYCTU | KsdD-like steroid dehydrogenase Rv0785 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0785 PE=1 SV=2 | 4 | 345 | 7.0E-114 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5587 | 0.4879 | 0.1146 | 0.2363 | 0.2933 | 0.0352 | 0.0651 | 0.3059 | 0.0885 | 0.1222 |
| Orthofinder run ID | 4 |
| Orthogroup | 6563 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|5986 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|2040 |
| Ophiocordyceps subramaniannii | Hirsu2|2470 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2470 MAGAAVLVASGGIGGNVDAVRAAWPVDELGPKVPEHFVVGVPAHVDGRMMGIAEAAGARIINRSRMWHYTEGLQN WNPIWPGHGIRVLPGPSSLWLDATGARLPPCLFPGSDTLATLRHICHTGFDYSWFVLDEAILAREFGLSGSEQNP DITGKSLCKLLLGRLLSRKGPVPVQNFRRHGRDFVVRDSLDDLVAGMNELAAERGGPALDAAAVRRTLEARDGQV RNGFCKDAQAMLVRNARSYWPDRLSRVAKPHAILDGKHGPLIAVRLNLLTRKTLGGIETDLRSNAMRADGTTFPG LFAAGEAAGFGGGGVHGHRSLEGTFLGGCIFSGRAAGMAMAEEFKSGGGRV* |
| Coding | >Hirsu2|2470 ATGGCCGGCGCCGCCGTCCTCGTCGCCTCGGGCGGCATCGGCGGCAACGTCGACGCCGTCAGGGCCGCCTGGCCG GTCGACGAGCTCGGCCCCAAGGTGCCGGAGCACTTCGTCGTCGGCGTGCCGGCCCACGTCGACGGCCGGATGATG GGCATCGCCGAGGCGGCCGGCGCGCGCATCATCAACCGCAGCCGCATGTGGCACTACACCGAGGGCCTGCAGAAC TGGAACCCCATCTGGCCCGGGCACGGCATCCGCGTGCTGCCGGGGCCGTCGTCGCTGTGGCTCGACGCCACGGGC GCCCGGCTGCCGCCCTGCCTGTTCCCGGGCTCGGACACGCTGGCGACGCTGCGGCACATCTGCCACACCGGCTTC GACTACAGCTGGTTCGTCCTGGACGAGGCCATCCTGGCGCGCGAGTTCGGCCTGTCCGGCTCGGAGCAGAACCCG GACATCACGGGCAAGAGCCTGTGCAAGCTGCTGCTGGGCCGCCTCCTGAGCCGCAAGGGCCCCGTGCCGGTCCAG AACTTCCGCCGCCACGGCCGCGACTTCGTCGTCCGCGACAGCCTCGACGACCTGGTGGCCGGCATGAACGAGCTG GCGGCCGAGCGGGGCGGTCCGGCGCTCGACGCGGCGGCCGTCCGGCGCACGCTCGAGGCCCGCGACGGCCAGGTC CGGAACGGCTTCTGCAAGGACGCCCAGGCGATGCTCGTCCGCAACGCGCGATCCTACTGGCCCGACCGCCTCAGC CGCGTCGCGAAGCCGCACGCCATTCTCGACGGCAAACACGGGCCGCTCATCGCCGTCCGCCTGAACCTGCTGACC CGCAAGACGCTGGGAGGCATCGAGACGGACCTGCGCAGCAACGCGATGCGGGCCGACGGTACGACCTTCCCGGGC CTCTTCGCCGCCGGCGAGGCCGCCGGCTTCGGCGGAGGCGGCGTCCACGGCCACCGCTCCCTCGAGGGGACCTTC TTGGGCGGATGCATCTTCTCGGGCCGGGCGGCGGGCATGGCCATGGCCGAAGAGTTCAAGAGCGGCGGCGGCCGG GTGTGA |
| Transcript | >Hirsu2|2470 ATGGCCGGCGCCGCCGTCCTCGTCGCCTCGGGCGGCATCGGCGGCAACGTCGACGCCGTCAGGGCCGCCTGGCCG GTCGACGAGCTCGGCCCCAAGGTGCCGGAGCACTTCGTCGTCGGCGTGCCGGCCCACGTCGACGGCCGGATGATG GGCATCGCCGAGGCGGCCGGCGCGCGCATCATCAACCGCAGCCGCATGTGGCACTACACCGAGGGCCTGCAGAAC TGGAACCCCATCTGGCCCGGGCACGGCATCCGCGTGCTGCCGGGGCCGTCGTCGCTGTGGCTCGACGCCACGGGC GCCCGGCTGCCGCCCTGCCTGTTCCCGGGCTCGGACACGCTGGCGACGCTGCGGCACATCTGCCACACCGGCTTC GACTACAGCTGGTTCGTCCTGGACGAGGCCATCCTGGCGCGCGAGTTCGGCCTGTCCGGCTCGGAGCAGAACCCG GACATCACGGGCAAGAGCCTGTGCAAGCTGCTGCTGGGCCGCCTCCTGAGCCGCAAGGGCCCCGTGCCGGTCCAG AACTTCCGCCGCCACGGCCGCGACTTCGTCGTCCGCGACAGCCTCGACGACCTGGTGGCCGGCATGAACGAGCTG GCGGCCGAGCGGGGCGGTCCGGCGCTCGACGCGGCGGCCGTCCGGCGCACGCTCGAGGCCCGCGACGGCCAGGTC CGGAACGGCTTCTGCAAGGACGCCCAGGCGATGCTCGTCCGCAACGCGCGATCCTACTGGCCCGACCGCCTCAGC CGCGTCGCGAAGCCGCACGCCATTCTCGACGGCAAACACGGGCCGCTCATCGCCGTCCGCCTGAACCTGCTGACC CGCAAGACGCTGGGAGGCATCGAGACGGACCTGCGCAGCAACGCGATGCGGGCCGACGGTACGACCTTCCCGGGC CTCTTCGCCGCCGGCGAGGCCGCCGGCTTCGGCGGAGGCGGCGTCCACGGCCACCGCTCCCTCGAGGGGACCTTC TTGGGCGGATGCATCTTCTCGGGCCGGGCGGCGGGCATGGCCATGGCCGAAGAGTTCAAGAGCGGCGGCGGCCGG GTGTGA |
| Gene | >Hirsu2|2470 ATGGCCGGCGCCGCCGTCCTCGTCGCCTCGGGCGGCATCGGCGGCAACGTCGACGCCGTCAGGGCCGCCTGGCCG GTCGACGAGCTCGGCCCCAAGGTGCCGGAGCACTTCGTCGTCGGCGTGCCGGCCCACGTCGACGGCCGGATGATG GGCATCGCCGAGGCGGCCGGCGCGCGCATCATCAACCGCAGCCGCATGTGGCACTACACCGAGGGCCTGCAGAAC TGGAACCCCATCTGGCCCGGGCACGGCATCCGCGTGCTGCCGGGGCCGTCGTCGCTGTGGCTCGACGCCACGGGC GCCCGGCTGCCGCCCTGCCTGTTCCCGGGCTCGGACACGCTGGCGACGCTGCGGCACATCTGCCACACCGGCTTC GACTACAGCTGGTTCGTCCTGGACGAGGCCATCCTGGCGCGCGAGTTCGGCCTGTCCGGCTCGGAGCAGAACCCG GACATCACGGGCAAGAGCCTGTGCAAGCTGCTGCTGGGCCGCCTCCTGAGCCGCAAGGGCCCCGTGCCGGTCCAG AACTTCCGCCGCCACGGCCGCGACTTCGTCGTCCGCGACAGCCTCGACGACCTGGTGGCCGGCATGAACGAGCTG GCGGCCGAGCGGGGCGGTCCGGCGCTCGACGCGGCGGCCGTCCGGCGCACGCTCGAGGCCCGCGACGGCCAGGTC CGGAACGGCTTCTGCAAGGACGCCCAGGCGATGCTCGTCCGCAACGCGCGATCCTACTGGCCCGACCGCCTCAGC CGCGTCGCGAAGCCGCACGCCATTCTCGACGGCAAACACGGGCCGCTCATCGCCGTCCGCCTGAACCTGCTGACC CGCAAGACGCTGGGAGGCATCGAGACGGACCTGCGCAGCAACGCGATGCGGGCCGACGGTACGACCTTCCCGGGC CTCTTCGCCGCCGGCGAGGCCGCCGGCTTCGGCGGAGGCGGCGTCCACGGCCACCGCTCCCTCGAGGGGACCTTC TTGGGCGGATGCATCTTCTCGGGCCGGGCGGCGGGCATGGCCATGGCCGAAGAGTTCAAGAGCGGCGGCGGCCGG GTGTGA |