© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2468 |
| Gene name | |
| Location | Contig_1592:2732..5099 |
| Strand | + |
| Gene length (bp) | 2367 |
| Transcript length (bp) | 2367 |
| Coding sequence length (bp) | 2367 |
| Protein length (aa) | 789 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7037 | 0.3584 | 0.2507 | 0.1015 | 0.2203 | 0.0583 | 0.1664 | 0.0563 | 0.1131 | 0.0254 |
| Orthofinder run ID | 4 |
| Orthogroup | 2099 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2468 MARLDTSPPSSSSSNPPTSRSSRTASASASTSSCSSSRPTAARKPPYSVVPFAARARPDCSRRARLPPPPFTAAL PPQHSLPPAKPRSVSAVVVVAAAAANASSSSSSASASASAASRRPPLRPKDRNHHHAPLLTSTKPDFKMPGGDRP RQPRLSATAARALKRPPLTPKIAAKGPPAAAPPLPPPPPSSTTAAATAPLSARRPQSLQHLGDDASSPPAAASLL GPGNAAPRSGPRQGAGSLTPSGAAPDRLTSDNWDNPRARTSLGTLSSANGGSNGAARPMPDCNADLQAECNKFFY ASDAKPPQQQLRPASVPQRPVAFFYANAAPADARRTANQAPAQDAVATKFFYANGAPDLASRPRPTLATSASAST LSTSSRPPLVRPGTSSSAMALTAAPTGQRPASPIKAAAVAASPPASHIPSTTSPLLPTTPKEAHSSALSSSPALA PAPPAAGRRRVSVDAAPRLSKKGHARAGSSASAVDPPKMATPPTPSRPASPPLSPGLPQPAMTMASLIQAVDELK ERETDRDGDAQSELASPTKSSFTADPVSELVANARRERKVQDLEITNASLEAINRTLERQLRKQTVELRRYRRLS RAGRITAASAASSRVPSAALTDPAVDLAGLTEEEEEEEEEEEEVVEEEGGGGGEQDSDSADPSDDSYLSSDDATE DGPPGDKLAARRKRDERRLQLDLTKHQELLVDSQKMNQSLKRCLDWTEELIREGTKALAYRVRVSDVEFGGRVLA PPDEADEDDDAAPPGLEPPWAKGPQDRDSGIDLPVDGG* |
| Coding | >Hirsu2|2468 ATGGCTCGCCTCGACACCTCTCCTCCGTCTTCCTCCTCCTCCAACCCCCCGACCAGCCGCAGCAGTCGGACCGCA TCCGCCTCGGCCTCTACCTCGTCCTGCTCGTCGTCGCGGCCGACCGCCGCCAGGAAGCCGCCCTACTCCGTCGTC CCCTTCGCCGCCAGGGCCCGGCCAGACTGCAGCAGGCGGGCGAGGCTGCCGCCGCCGCCCTTCACCGCTGCGCTG CCGCCCCAGCATTCCTTGCCGCCGGCCAAGCCGAGATCTGTCTCCGCCGTCGTCGTCGTCGCCGCCGCCGCCGCC AACGCTTCTTCCTCGTCCTCTTCCGCCTCCGCCTCCGCCTCCGCCGCCAGCCGCCGCCCGCCGCTTCGTCCGAAA GACCGCAACCATCACCATGCCCCACTGCTGACGTCGACGAAGCCCGACTTCAAGATGCCCGGAGGCGACCGCCCG CGACAGCCCCGGCTGAGCGCCACCGCCGCCCGCGCCCTCAAACGCCCGCCCCTGACCCCCAAGATCGCCGCCAAG GGTCCGCCCGCCGCCGCTCCTCCGCTTCCCCCTCCTCCGCCGTCCTCGACCACGGCCGCCGCCACCGCCCCGTTG TCCGCCAGGAGGCCCCAGAGCCTCCAGCACCTGGGGGACGATGCCTCCTCCCCCCCCGCCGCCGCCTCGCTGCTC GGCCCCGGAAACGCCGCTCCGCGCTCCGGCCCCCGACAGGGCGCCGGCTCCCTGACGCCCTCCGGAGCCGCCCCC GACCGGCTGACGTCGGACAACTGGGATAACCCCCGCGCCAGGACGAGCCTCGGCACCCTCAGCTCGGCCAACGGC GGCTCCAACGGCGCCGCCCGCCCGATGCCGGACTGCAACGCCGACCTCCAGGCCGAGTGCAACAAGTTCTTCTAT GCCAGCGACGCCAAGCCACCGCAGCAGCAGCTGAGGCCTGCCTCCGTCCCGCAGAGGCCCGTCGCCTTCTTCTAC GCCAACGCCGCCCCCGCCGATGCGAGACGGACCGCCAACCAAGCACCGGCCCAAGATGCCGTCGCCACCAAGTTC TTCTACGCCAACGGAGCGCCCGACCTGGCCTCCCGGCCCAGACCGACGCTCGCCACCTCGGCCTCGGCCTCGACG CTGTCGACGAGCTCGAGGCCGCCGCTGGTGCGCCCCGGCACGAGCAGCTCCGCCATGGCACTCACCGCTGCGCCG ACGGGTCAACGGCCGGCGTCACCGATCAAGGCCGCCGCTGTTGCCGCGTCGCCACCCGCATCCCATATCCCGAGC ACGACGAGCCCCCTGCTGCCCACGACGCCGAAAGAGGCACACTCCTCGGCACTGTCGTCTTCGCCTGCCCTGGCC CCGGCACCGCCTGCCGCCGGCAGGAGGAGAGTGAGTGTCGACGCCGCGCCCCGGCTCAGCAAGAAGGGGCACGCG AGGGCCGGCAGCAGTGCATCGGCCGTGGACCCGCCCAAGATGGCCACGCCGCCCACGCCGTCGCGGCCGGCATCG CCCCCCCTCAGCCCCGGGCTGCCGCAGCCGGCCATGACGATGGCCTCGCTCATCCAGGCCGTCGACGAGCTCAAG GAGCGAGAGACGGACCGGGACGGGGACGCGCAGTCGGAGCTGGCCAGCCCCACCAAGTCGTCCTTCACGGCGGAC CCCGTCAGCGAGCTCGTCGCCAACGCGCGGCGCGAGCGCAAGGTCCAGGACCTCGAGATCACCAACGCCTCCCTC GAGGCCATCAACCGGACGCTCGAGAGGCAGCTGCGCAAGCAGACGGTCGAGCTCCGCCGGTACCGCCGCCTGTCC CGGGCGGGCCGGATCACGGCCGCGTCGGCGGCGTCGAGCCGCGTGCCGTCCGCCGCCCTGACCGATCCCGCCGTC GACCTCGCCGGCCTGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGTGGAGGAGGAGGGCGGC GGCGGCGGCGAGCAGGACAGTGACTCGGCGGACCCGTCGGACGACTCGTACCTCTCGAGCGACGACGCCACCGAG GACGGGCCGCCGGGCGACAAGCTCGCGGCGCGGCGCAAGCGCGACGAGCGGCGGCTGCAGCTCGACCTGACCAAG CACCAGGAGCTGCTGGTCGACAGCCAGAAGATGAACCAGAGCCTGAAGCGCTGCCTCGACTGGACCGAGGAGCTG ATCCGCGAGGGCACCAAGGCGCTGGCGTACCGCGTGCGCGTGTCCGACGTTGAGTTCGGCGGCCGCGTGCTCGCG CCGCCCGACGAGGCCGACGAAGACGACGACGCCGCGCCGCCGGGCCTCGAGCCGCCGTGGGCCAAGGGCCCGCAG GACCGCGACAGCGGCATCGACCTGCCCGTCGACGGCGGCTGA |
| Transcript | >Hirsu2|2468 ATGGCTCGCCTCGACACCTCTCCTCCGTCTTCCTCCTCCTCCAACCCCCCGACCAGCCGCAGCAGTCGGACCGCA TCCGCCTCGGCCTCTACCTCGTCCTGCTCGTCGTCGCGGCCGACCGCCGCCAGGAAGCCGCCCTACTCCGTCGTC CCCTTCGCCGCCAGGGCCCGGCCAGACTGCAGCAGGCGGGCGAGGCTGCCGCCGCCGCCCTTCACCGCTGCGCTG CCGCCCCAGCATTCCTTGCCGCCGGCCAAGCCGAGATCTGTCTCCGCCGTCGTCGTCGTCGCCGCCGCCGCCGCC AACGCTTCTTCCTCGTCCTCTTCCGCCTCCGCCTCCGCCTCCGCCGCCAGCCGCCGCCCGCCGCTTCGTCCGAAA GACCGCAACCATCACCATGCCCCACTGCTGACGTCGACGAAGCCCGACTTCAAGATGCCCGGAGGCGACCGCCCG CGACAGCCCCGGCTGAGCGCCACCGCCGCCCGCGCCCTCAAACGCCCGCCCCTGACCCCCAAGATCGCCGCCAAG GGTCCGCCCGCCGCCGCTCCTCCGCTTCCCCCTCCTCCGCCGTCCTCGACCACGGCCGCCGCCACCGCCCCGTTG TCCGCCAGGAGGCCCCAGAGCCTCCAGCACCTGGGGGACGATGCCTCCTCCCCCCCCGCCGCCGCCTCGCTGCTC GGCCCCGGAAACGCCGCTCCGCGCTCCGGCCCCCGACAGGGCGCCGGCTCCCTGACGCCCTCCGGAGCCGCCCCC GACCGGCTGACGTCGGACAACTGGGATAACCCCCGCGCCAGGACGAGCCTCGGCACCCTCAGCTCGGCCAACGGC GGCTCCAACGGCGCCGCCCGCCCGATGCCGGACTGCAACGCCGACCTCCAGGCCGAGTGCAACAAGTTCTTCTAT GCCAGCGACGCCAAGCCACCGCAGCAGCAGCTGAGGCCTGCCTCCGTCCCGCAGAGGCCCGTCGCCTTCTTCTAC GCCAACGCCGCCCCCGCCGATGCGAGACGGACCGCCAACCAAGCACCGGCCCAAGATGCCGTCGCCACCAAGTTC TTCTACGCCAACGGAGCGCCCGACCTGGCCTCCCGGCCCAGACCGACGCTCGCCACCTCGGCCTCGGCCTCGACG CTGTCGACGAGCTCGAGGCCGCCGCTGGTGCGCCCCGGCACGAGCAGCTCCGCCATGGCACTCACCGCTGCGCCG ACGGGTCAACGGCCGGCGTCACCGATCAAGGCCGCCGCTGTTGCCGCGTCGCCACCCGCATCCCATATCCCGAGC ACGACGAGCCCCCTGCTGCCCACGACGCCGAAAGAGGCACACTCCTCGGCACTGTCGTCTTCGCCTGCCCTGGCC CCGGCACCGCCTGCCGCCGGCAGGAGGAGAGTGAGTGTCGACGCCGCGCCCCGGCTCAGCAAGAAGGGGCACGCG AGGGCCGGCAGCAGTGCATCGGCCGTGGACCCGCCCAAGATGGCCACGCCGCCCACGCCGTCGCGGCCGGCATCG CCCCCCCTCAGCCCCGGGCTGCCGCAGCCGGCCATGACGATGGCCTCGCTCATCCAGGCCGTCGACGAGCTCAAG GAGCGAGAGACGGACCGGGACGGGGACGCGCAGTCGGAGCTGGCCAGCCCCACCAAGTCGTCCTTCACGGCGGAC CCCGTCAGCGAGCTCGTCGCCAACGCGCGGCGCGAGCGCAAGGTCCAGGACCTCGAGATCACCAACGCCTCCCTC GAGGCCATCAACCGGACGCTCGAGAGGCAGCTGCGCAAGCAGACGGTCGAGCTCCGCCGGTACCGCCGCCTGTCC CGGGCGGGCCGGATCACGGCCGCGTCGGCGGCGTCGAGCCGCGTGCCGTCCGCCGCCCTGACCGATCCCGCCGTC GACCTCGCCGGCCTGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGTGGAGGAGGAGGGCGGC GGCGGCGGCGAGCAGGACAGTGACTCGGCGGACCCGTCGGACGACTCGTACCTCTCGAGCGACGACGCCACCGAG GACGGGCCGCCGGGCGACAAGCTCGCGGCGCGGCGCAAGCGCGACGAGCGGCGGCTGCAGCTCGACCTGACCAAG CACCAGGAGCTGCTGGTCGACAGCCAGAAGATGAACCAGAGCCTGAAGCGCTGCCTCGACTGGACCGAGGAGCTG ATCCGCGAGGGCACCAAGGCGCTGGCGTACCGCGTGCGCGTGTCCGACGTTGAGTTCGGCGGCCGCGTGCTCGCG CCGCCCGACGAGGCCGACGAAGACGACGACGCCGCGCCGCCGGGCCTCGAGCCGCCGTGGGCCAAGGGCCCGCAG GACCGCGACAGCGGCATCGACCTGCCCGTCGACGGCGGCTGA |
| Gene | >Hirsu2|2468 ATGGCTCGCCTCGACACCTCTCCTCCGTCTTCCTCCTCCTCCAACCCCCCGACCAGCCGCAGCAGTCGGACCGCA TCCGCCTCGGCCTCTACCTCGTCCTGCTCGTCGTCGCGGCCGACCGCCGCCAGGAAGCCGCCCTACTCCGTCGTC CCCTTCGCCGCCAGGGCCCGGCCAGACTGCAGCAGGCGGGCGAGGCTGCCGCCGCCGCCCTTCACCGCTGCGCTG CCGCCCCAGCATTCCTTGCCGCCGGCCAAGCCGAGATCTGTCTCCGCCGTCGTCGTCGTCGCCGCCGCCGCCGCC AACGCTTCTTCCTCGTCCTCTTCCGCCTCCGCCTCCGCCTCCGCCGCCAGCCGCCGCCCGCCGCTTCGTCCGAAA GACCGCAACCATCACCATGCCCCACTGCTGACGTCGACGAAGCCCGACTTCAAGATGCCCGGAGGCGACCGCCCG CGACAGCCCCGGCTGAGCGCCACCGCCGCCCGCGCCCTCAAACGCCCGCCCCTGACCCCCAAGATCGCCGCCAAG GGTCCGCCCGCCGCCGCTCCTCCGCTTCCCCCTCCTCCGCCGTCCTCGACCACGGCCGCCGCCACCGCCCCGTTG TCCGCCAGGAGGCCCCAGAGCCTCCAGCACCTGGGGGACGATGCCTCCTCCCCCCCCGCCGCCGCCTCGCTGCTC GGCCCCGGAAACGCCGCTCCGCGCTCCGGCCCCCGACAGGGCGCCGGCTCCCTGACGCCCTCCGGAGCCGCCCCC GACCGGCTGACGTCGGACAACTGGGATAACCCCCGCGCCAGGACGAGCCTCGGCACCCTCAGCTCGGCCAACGGC GGCTCCAACGGCGCCGCCCGCCCGATGCCGGACTGCAACGCCGACCTCCAGGCCGAGTGCAACAAGTTCTTCTAT GCCAGCGACGCCAAGCCACCGCAGCAGCAGCTGAGGCCTGCCTCCGTCCCGCAGAGGCCCGTCGCCTTCTTCTAC GCCAACGCCGCCCCCGCCGATGCGAGACGGACCGCCAACCAAGCACCGGCCCAAGATGCCGTCGCCACCAAGTTC TTCTACGCCAACGGAGCGCCCGACCTGGCCTCCCGGCCCAGACCGACGCTCGCCACCTCGGCCTCGGCCTCGACG CTGTCGACGAGCTCGAGGCCGCCGCTGGTGCGCCCCGGCACGAGCAGCTCCGCCATGGCACTCACCGCTGCGCCG ACGGGTCAACGGCCGGCGTCACCGATCAAGGCCGCCGCTGTTGCCGCGTCGCCACCCGCATCCCATATCCCGAGC ACGACGAGCCCCCTGCTGCCCACGACGCCGAAAGAGGCACACTCCTCGGCACTGTCGTCTTCGCCTGCCCTGGCC CCGGCACCGCCTGCCGCCGGCAGGAGGAGAGTGAGTGTCGACGCCGCGCCCCGGCTCAGCAAGAAGGGGCACGCG AGGGCCGGCAGCAGTGCATCGGCCGTGGACCCGCCCAAGATGGCCACGCCGCCCACGCCGTCGCGGCCGGCATCG CCCCCCCTCAGCCCCGGGCTGCCGCAGCCGGCCATGACGATGGCCTCGCTCATCCAGGCCGTCGACGAGCTCAAG GAGCGAGAGACGGACCGGGACGGGGACGCGCAGTCGGAGCTGGCCAGCCCCACCAAGTCGTCCTTCACGGCGGAC CCCGTCAGCGAGCTCGTCGCCAACGCGCGGCGCGAGCGCAAGGTCCAGGACCTCGAGATCACCAACGCCTCCCTC GAGGCCATCAACCGGACGCTCGAGAGGCAGCTGCGCAAGCAGACGGTCGAGCTCCGCCGGTACCGCCGCCTGTCC CGGGCGGGCCGGATCACGGCCGCGTCGGCGGCGTCGAGCCGCGTGCCGTCCGCCGCCCTGACCGATCCCGCCGTC GACCTCGCCGGCCTGACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGTGGAGGAGGAGGGCGGC GGCGGCGGCGAGCAGGACAGTGACTCGGCGGACCCGTCGGACGACTCGTACCTCTCGAGCGACGACGCCACCGAG GACGGGCCGCCGGGCGACAAGCTCGCGGCGCGGCGCAAGCGCGACGAGCGGCGGCTGCAGCTCGACCTGACCAAG CACCAGGAGCTGCTGGTCGACAGCCAGAAGATGAACCAGAGCCTGAAGCGCTGCCTCGACTGGACCGAGGAGCTG ATCCGCGAGGGCACCAAGGCGCTGGCGTACCGCGTGCGCGTGTCCGACGTTGAGTTCGGCGGCCGCGTGCTCGCG CCGCCCGACGAGGCCGACGAAGACGACGACGCCGCGCCGCCGGGCCTCGAGCCGCCGTGGGCCAAGGGCCCGCAG GACCGCGACAGCGGCATCGACCTGCCCGTCGACGGCGGCTGA |