© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2465 |
| Gene name | |
| Location | Contig_1590:980..1864 |
| Strand | + |
| Gene length (bp) | 884 |
| Transcript length (bp) | 624 |
| Coding sequence length (bp) | 624 |
| Protein length (aa) | 208 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25710|NUJM_NEUCR | NADH-ubiquinone oxidoreductase 21.3 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B13D24.010 PE=4 SV=1 | 19 | 201 | 2.0E-47 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Transmembrane domain|Mitochondrial transit peptide | 0.0785 | 0.1867 | 0.0096 | 0.0686 | 0.8994 | 0.4762 | 0.2252 | 0.2158 | 0.127 | 0.0186 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 80 | 22 |
| 2 | 93 | 110 | 17 |
| 3 | 114 | 136 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2097 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2465 MNQRASSGPEALVKAEKPYKPHDVFDETLKTGLGGMGGGFFLAAVRNAMAKGNVGAMSVFTRGAPLIGLCTIGPA SYAFFSRTMMNLREKDDAWAAAFGGFICGSTLGLPLRRMSAVLGFGAFFSVLEGTFHFLGGRIDSFKDEDDEFER KEILRRTTRVPLAQTIAEIGEGRGIKPPGYEERRRERIKEKYGIEINPVKATVDGST* |
| Coding | >Hirsu2|2465 ATGAATCAACGGGCGAGCTCCGGCCCCGAGGCGCTCGTGAAGGCCGAGAAGCCGTACAAGCCGCACGATGTCTTC GACGAGACGCTCAAGACGGGCCTCGGCGGCATGGGCGGCGGCTTCTTCCTCGCCGCCGTGCGCAACGCCATGGCC AAGGGCAACGTCGGCGCCATGAGCGTCTTCACCCGCGGCGCGCCCCTCATCGGCCTCTGCACCATCGGCCCGGCC TCGTACGCCTTCTTCTCGCGCACCATGATGAACCTCCGGGAGAAGGATGACGCGTGGGCCGCGGCCTTTGGCGGC TTCATCTGCGGCAGCACCCTCGGCCTGCCATTACGGAGGATGTCGGCCGTCCTCGGCTTCGGCGCCTTCTTCAGC GTCCTCGAGGGCACCTTCCACTTCCTCGGCGGCCGTATCGACAGCTTCAAGGACGAGGACGACGAGTTCGAGCGC AAGGAGATCCTGCGGCGCACCACGCGCGTGCCCCTCGCGCAGACCATCGCCGAGATCGGCGAGGGCCGCGGCATC AAGCCCCCGGGCTACGAGGAGCGCAGACGAGAGCGGATCAAGGAGAAGTACGGCATCGAGATCAACCCTGTCAAG GCGACGGTCGACGGGAGCACCTAG |
| Transcript | >Hirsu2|2465 ATGAATCAACGGGCGAGCTCCGGCCCCGAGGCGCTCGTGAAGGCCGAGAAGCCGTACAAGCCGCACGATGTCTTC GACGAGACGCTCAAGACGGGCCTCGGCGGCATGGGCGGCGGCTTCTTCCTCGCCGCCGTGCGCAACGCCATGGCC AAGGGCAACGTCGGCGCCATGAGCGTCTTCACCCGCGGCGCGCCCCTCATCGGCCTCTGCACCATCGGCCCGGCC TCGTACGCCTTCTTCTCGCGCACCATGATGAACCTCCGGGAGAAGGATGACGCGTGGGCCGCGGCCTTTGGCGGC TTCATCTGCGGCAGCACCCTCGGCCTGCCATTACGGAGGATGTCGGCCGTCCTCGGCTTCGGCGCCTTCTTCAGC GTCCTCGAGGGCACCTTCCACTTCCTCGGCGGCCGTATCGACAGCTTCAAGGACGAGGACGACGAGTTCGAGCGC AAGGAGATCCTGCGGCGCACCACGCGCGTGCCCCTCGCGCAGACCATCGCCGAGATCGGCGAGGGCCGCGGCATC AAGCCCCCGGGCTACGAGGAGCGCAGACGAGAGCGGATCAAGGAGAAGTACGGCATCGAGATCAACCCTGTCAAG GCGACGGTCGACGGGAGCACCTAG |
| Gene | >Hirsu2|2465 ATGAATCAACGGGCGAGCTCCGGCCCCGAGGCGCTCGTGAAGGCCGAGAAGCCGTACAAGCCGCACGATGTCTTC GACGAGACGCTCAAGACGGGCCTCGGCGGCATGGGCGGCGGCTTCTTCCTCGCCGCCGTGCGCAACGCCATGGCC AAGGGCAACGTCGGCGCCATGAGCGTCTTCACCCGCGGCGCGCCCCTCATCGGCCTCTGCAGTACGTGTCTGCGC GAATTGGGCCCGGCGGGCGGCGTGCAGACGGCGCGCTCGCCTCCCTGCCTGCTTCTCCGTTCCGGCTGACTGGGC CTTGCTCGCAGCCATCGGCCCGGCCTCGTACGCCTTCTTCTCGCGCACCATGATGAACCTCCGGGAGAAGGATGA CGCGTGGGCCGCGGCCTTTGGCGGCTTCATCTGCGGCAGCACCCTCGGCCTGCCATGTACGTCTCCCCGCCGAAC CGCCGCGCCGCGTGTCCCAGGCTGATGGTGACGCCTAGTACGGAGGATGTCGGCCGTCCTCGGCTTCGGCGCCTT CTTCAGCGTCCTCGAGGGCACCTTCCACTTCCTCGGCGGCCGTATCGACAGCTTCAAGGACGAGGACGACGAGTT CGAGCGCAAGGAGATCCTGCGGCGCACCACGCGCGTGCCCCTCGCGCAGACCATCGCCGAGATCGGCGAGGGCCG CGGTGCGTCCCTTCTTCTTCTTCTTCTCCCCCCCCTTCCCCCCCCCCTTGGCCGCCGCGAATCGGCTTTTGCTCT TCTTGCTGACGCAGCGACCCGCCGTCCCAGGCATCAAGCCCCCGGGCTACGAGGAGCGCAGACGAGAGCGGATCA AGGAGAAGTACGGCATCGAGATCAACCCTGTCAAGGCGACGGTCGACGGGAGCACCTAG |