© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2464 |
| Gene name | |
| Location | Contig_159:30464..32377 |
| Strand | + |
| Gene length (bp) | 1913 |
| Transcript length (bp) | 1851 |
| Coding sequence length (bp) | 1851 |
| Protein length (aa) | 617 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07662 | Nucleos_tra2_C | Na+ dependent nucleoside transporter C-terminus | 3.4E-70 | 386 | 599 |
| PF01773 | Nucleos_tra2_N | Na+ dependent nucleoside transporter N-terminus | 6.8E-23 | 201 | 272 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UA35|S28A3_EPTST | Solute carrier family 28 member 3 OS=Eptatretus stoutii GN=SLC28A3 PE=2 SV=1 | 194 | 606 | 4.0E-83 |
| sp|Q9ERH8|S28A3_MOUSE | Solute carrier family 28 member 3 OS=Mus musculus GN=Slc28a3 PE=2 SV=1 | 198 | 604 | 1.0E-78 |
| sp|Q62773|S28A2_RAT | Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus GN=Slc28a2 PE=1 SV=1 | 193 | 601 | 1.0E-78 |
| sp|Q8VIH3|S28A3_RAT | Solute carrier family 28 member 3 OS=Rattus norvegicus GN=Slc28a3 PE=2 SV=1 | 195 | 604 | 7.0E-78 |
| sp|O43868|S28A2_HUMAN | Sodium/nucleoside cotransporter 2 OS=Homo sapiens GN=SLC28A2 PE=2 SV=2 | 193 | 601 | 2.0E-77 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UA35|S28A3_EPTST | Solute carrier family 28 member 3 OS=Eptatretus stoutii GN=SLC28A3 PE=2 SV=1 | 194 | 606 | 4.0E-83 |
| sp|Q9ERH8|S28A3_MOUSE | Solute carrier family 28 member 3 OS=Mus musculus GN=Slc28a3 PE=2 SV=1 | 198 | 604 | 1.0E-78 |
| sp|Q62773|S28A2_RAT | Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus GN=Slc28a2 PE=1 SV=1 | 193 | 601 | 1.0E-78 |
| sp|Q8VIH3|S28A3_RAT | Solute carrier family 28 member 3 OS=Rattus norvegicus GN=Slc28a3 PE=2 SV=1 | 195 | 604 | 7.0E-78 |
| sp|O43868|S28A2_HUMAN | Sodium/nucleoside cotransporter 2 OS=Homo sapiens GN=SLC28A2 PE=2 SV=2 | 193 | 601 | 2.0E-77 |
| sp|Q62674|S28A1_RAT | Sodium/nucleoside cotransporter 1 OS=Rattus norvegicus GN=Slc28a1 PE=1 SV=1 | 172 | 601 | 4.0E-77 |
| sp|Q9MZT2|S28A1_RABIT | Sodium/nucleoside cotransporter 1 OS=Oryctolagus cuniculus GN=SLC28A1 PE=2 SV=1 | 193 | 601 | 2.0E-76 |
| sp|O62667|S28A1_PIG | Sodium/nucleoside cotransporter 1 OS=Sus scrofa GN=SLC28A1 PE=2 SV=1 | 193 | 601 | 2.0E-76 |
| sp|O88627|S28A2_MOUSE | Sodium/nucleoside cotransporter 2 OS=Mus musculus GN=Slc28a2 PE=1 SV=2 | 193 | 601 | 9.0E-76 |
| sp|Q9HAS3|S28A3_HUMAN | Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1 | 195 | 604 | 1.0E-75 |
| sp|O00337|S28A1_HUMAN | Sodium/nucleoside cotransporter 1 OS=Homo sapiens GN=SLC28A1 PE=1 SV=2 | 191 | 601 | 2.0E-74 |
| sp|P44742|Y519_HAEIN | Uncharacterized transporter HI_0519 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0519 PE=3 SV=1 | 199 | 602 | 7.0E-74 |
| sp|O32115|YUTK_BACSU | Uncharacterized transporter YutK OS=Bacillus subtilis (strain 168) GN=yutK PE=3 SV=1 | 200 | 602 | 1.0E-68 |
| sp|O25792|NUPC_HELPY | Nucleoside permease NupC OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=nupC PE=3 SV=1 | 199 | 602 | 9.0E-58 |
| sp|P33021|NUPX_ECOLI | Putative nucleoside permease NupX OS=Escherichia coli (strain K12) GN=nupX PE=1 SV=1 | 199 | 602 | 2.0E-47 |
| sp|P33024|PSUT_ECOLI | Putative pseudouridine transporter OS=Escherichia coli (strain K12) GN=psuT PE=1 SV=1 | 199 | 602 | 4.0E-43 |
| sp|P0AFF2|NUPC_ECOLI | Nucleoside permease NupC OS=Escherichia coli (strain K12) GN=nupC PE=1 SV=1 | 212 | 602 | 6.0E-26 |
| sp|P0AFF3|NUPC_ECOL6 | Nucleoside permease NupC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nupC PE=3 SV=1 | 212 | 602 | 6.0E-26 |
| sp|P39141|NUPC_BACSU | Nucleoside permease NupC OS=Bacillus subtilis (strain 168) GN=nupC PE=2 SV=4 | 198 | 601 | 1.0E-24 |
| sp|P42312|NUPG_BACSU | Purine nucleoside transport protein NupG OS=Bacillus subtilis (strain 168) GN=nupG PE=1 SV=2 | 198 | 602 | 2.0E-22 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Transmembrane domain | 0.0897 | 0.2396 | 0.0607 | 0.3078 | 0.1733 | 0.0135 | 0.4807 | 0.4486 | 0.2581 | 0.0112 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 92 | 111 | 19 |
| 2 | 118 | 135 | 17 |
| 3 | 198 | 215 | 17 |
| 4 | 222 | 244 | 22 |
| 5 | 280 | 302 | 22 |
| 6 | 315 | 337 | 22 |
| 7 | 357 | 379 | 22 |
| 8 | 449 | 471 | 22 |
| 9 | 481 | 500 | 19 |
| 10 | 543 | 565 | 22 |
| 11 | 580 | 602 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 2096 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2464 MAPDSAVPELAGDGMRNPPLKQQHDAVVYAQTGLDRHGVEKAPVVTPPDYSDTEKAEAGHGSTELTSAPGPDDDD GRRPAPLRLLVRHRRLLVQLLLFLVFTGWWIASLVLHRNDKNWVVPFLLWLAITLRLVFYHVPIRYVSGPIRWLW HHSAVVVYNAIPPRFRTPAGAAAAVSVILLGSFVSEESADNTRANRAVSLFGMLVIIFVFWLTSAARSHVNWRTV VGGMLAQYVIGLFVLRTTVGFDIFKFIADRAGDLLGFAKDGLAFLTDDEVPKSTWFLLTVIPAIIFFISLVQVLY YIGFLQWFIRKFAAFVFWALGVSGAEAVVAAATPFIGQGESAMLVRPFVPHMTKAEIHQIMTCGFATISGSVLVG YIGLGLNPEALVSSCIMSIPASLAISKLRYPETEETLTAGRVVLPDDDEEGRAENALHAFANGAWLGIKIGGTIV ASLLCTLAAVGLINGLLSWWGRYLNITNPDLTLQLMLSYILYPVAFLLGVPRNGDILKVAKLIAEKVVTNEFKAF QKMAKDPEFAPMSARSQLIATYALCGFGNIGSMGVQIGILGQLAPSRGGDVSRLALSALISGVMSTLTSATVAGL VVTTQLSSFTRGGAPS* |
| Coding | >Hirsu2|2464 ATGGCCCCCGACTCGGCCGTGCCCGAACTGGCCGGCGACGGGATGCGCAACCCCCCTCTCAAACAGCAGCACGAT GCCGTCGTCTACGCGCAGACCGGCCTGGACCGCCACGGCGTCGAAAAGGCGCCCGTCGTCACGCCGCCCGACTAC AGCGACACGGAAAAGGCCGAGGCCGGCCATGGCTCGACGGAGCTGACGTCGGCCCCCGGCCCCGACGACGACGAC GGCCGCCGCCCCGCGCCCCTCCGCCTCCTCGTCCGCCACCGCCGCCTCCTCGTCCAGCTCTTGCTCTTCCTCGTC TTCACCGGCTGGTGGATCGCCTCCCTCGTCCTCCACCGCAACGACAAGAACTGGGTCGTGCCCTTCCTGCTGTGG CTCGCCATCACCCTCCGCCTCGTCTTCTACCACGTCCCCATCCGCTACGTCTCGGGCCCCATCCGCTGGCTGTGG CACCACTCGGCCGTCGTCGTCTACAACGCCATCCCCCCCCGCTTCCGCACCCCCGCCGGCGCCGCCGCCGCCGTC TCCGTCATCCTCCTCGGCTCCTTCGTCTCCGAGGAGAGCGCCGACAACACGCGCGCCAACCGCGCCGTCAGCCTC TTCGGCATGCTCGTCATCATCTTCGTCTTCTGGCTCACCAGCGCCGCCCGCTCCCACGTCAACTGGCGCACCGTC GTCGGCGGCATGCTGGCCCAGTACGTCATCGGCCTCTTCGTCCTGCGCACCACGGTCGGCTTCGACATCTTCAAG TTCATCGCCGACCGCGCCGGCGACCTGCTCGGCTTCGCCAAGGACGGCCTCGCCTTCCTCACCGACGACGAGGTG CCCAAGTCGACCTGGTTCCTGCTGACCGTCATCCCCGCCATCATCTTCTTCATCTCGCTCGTCCAGGTGCTCTAC TACATCGGCTTCCTCCAGTGGTTCATCCGCAAGTTCGCCGCCTTCGTCTTCTGGGCCCTCGGCGTCTCGGGCGCC GAGGCCGTCGTCGCCGCCGCCACCCCCTTCATCGGCCAGGGCGAGTCGGCCATGCTCGTCCGCCCCTTCGTCCCG CACATGACCAAGGCCGAGATCCACCAGATCATGACGTGCGGCTTCGCCACCATCTCCGGCTCCGTCCTCGTCGGC TACATCGGCCTCGGCCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATCCCGGCCTCGCTCGCCATC TCCAAGCTGCGCTACCCGGAGACGGAGGAGACGCTGACGGCCGGCCGCGTCGTCCTGCCCGACGACGACGAGGAG GGCCGCGCCGAGAACGCGCTGCACGCCTTCGCCAACGGCGCCTGGCTCGGCATCAAGATTGGCGGCACCATCGTC GCCTCGCTGCTGTGCACCCTTGCCGCCGTCGGCCTCATCAACGGCCTGCTGAGCTGGTGGGGCCGCTACCTCAAC ATCACCAACCCGGACCTGACGCTGCAGCTGATGCTGTCGTACATCCTGTACCCCGTCGCCTTCCTCCTCGGCGTC CCGCGCAACGGCGACATCCTCAAGGTCGCCAAGCTCATTGCCGAAAAGGTGGTTACCAACGAGTTCAAGGCCTTT CAGAAGATGGCCAAGGACCCCGAGTTTGCCCCGATGTCGGCTCGGTCGCAGCTCATCGCCACCTACGCCCTGTGC GGCTTCGGCAACATCGGCTCCATGGGCGTCCAGATCGGCATCCTCGGCCAGCTGGCGCCGTCGCGCGGCGGCGAC GTGTCGAGGCTCGCGCTGTCGGCCCTCATCTCGGGCGTCATGTCGACGCTGACGTCGGCCACCGTCGCCGGCCTC GTCGTCACCACGCAGCTCAGCTCCTTTACCAGGGGCGGCGCGCCGTCGTAG |
| Transcript | >Hirsu2|2464 ATGGCCCCCGACTCGGCCGTGCCCGAACTGGCCGGCGACGGGATGCGCAACCCCCCTCTCAAACAGCAGCACGAT GCCGTCGTCTACGCGCAGACCGGCCTGGACCGCCACGGCGTCGAAAAGGCGCCCGTCGTCACGCCGCCCGACTAC AGCGACACGGAAAAGGCCGAGGCCGGCCATGGCTCGACGGAGCTGACGTCGGCCCCCGGCCCCGACGACGACGAC GGCCGCCGCCCCGCGCCCCTCCGCCTCCTCGTCCGCCACCGCCGCCTCCTCGTCCAGCTCTTGCTCTTCCTCGTC TTCACCGGCTGGTGGATCGCCTCCCTCGTCCTCCACCGCAACGACAAGAACTGGGTCGTGCCCTTCCTGCTGTGG CTCGCCATCACCCTCCGCCTCGTCTTCTACCACGTCCCCATCCGCTACGTCTCGGGCCCCATCCGCTGGCTGTGG CACCACTCGGCCGTCGTCGTCTACAACGCCATCCCCCCCCGCTTCCGCACCCCCGCCGGCGCCGCCGCCGCCGTC TCCGTCATCCTCCTCGGCTCCTTCGTCTCCGAGGAGAGCGCCGACAACACGCGCGCCAACCGCGCCGTCAGCCTC TTCGGCATGCTCGTCATCATCTTCGTCTTCTGGCTCACCAGCGCCGCCCGCTCCCACGTCAACTGGCGCACCGTC GTCGGCGGCATGCTGGCCCAGTACGTCATCGGCCTCTTCGTCCTGCGCACCACGGTCGGCTTCGACATCTTCAAG TTCATCGCCGACCGCGCCGGCGACCTGCTCGGCTTCGCCAAGGACGGCCTCGCCTTCCTCACCGACGACGAGGTG CCCAAGTCGACCTGGTTCCTGCTGACCGTCATCCCCGCCATCATCTTCTTCATCTCGCTCGTCCAGGTGCTCTAC TACATCGGCTTCCTCCAGTGGTTCATCCGCAAGTTCGCCGCCTTCGTCTTCTGGGCCCTCGGCGTCTCGGGCGCC GAGGCCGTCGTCGCCGCCGCCACCCCCTTCATCGGCCAGGGCGAGTCGGCCATGCTCGTCCGCCCCTTCGTCCCG CACATGACCAAGGCCGAGATCCACCAGATCATGACGTGCGGCTTCGCCACCATCTCCGGCTCCGTCCTCGTCGGC TACATCGGCCTCGGCCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATCCCGGCCTCGCTCGCCATC TCCAAGCTGCGCTACCCGGAGACGGAGGAGACGCTGACGGCCGGCCGCGTCGTCCTGCCCGACGACGACGAGGAG GGCCGCGCCGAGAACGCGCTGCACGCCTTCGCCAACGGCGCCTGGCTCGGCATCAAGATTGGCGGCACCATCGTC GCCTCGCTGCTGTGCACCCTTGCCGCCGTCGGCCTCATCAACGGCCTGCTGAGCTGGTGGGGCCGCTACCTCAAC ATCACCAACCCGGACCTGACGCTGCAGCTGATGCTGTCGTACATCCTGTACCCCGTCGCCTTCCTCCTCGGCGTC CCGCGCAACGGCGACATCCTCAAGGTCGCCAAGCTCATTGCCGAAAAGGTGGTTACCAACGAGTTCAAGGCCTTT CAGAAGATGGCCAAGGACCCCGAGTTTGCCCCGATGTCGGCTCGGTCGCAGCTCATCGCCACCTACGCCCTGTGC GGCTTCGGCAACATCGGCTCCATGGGCGTCCAGATCGGCATCCTCGGCCAGCTGGCGCCGTCGCGCGGCGGCGAC GTGTCGAGGCTCGCGCTGTCGGCCCTCATCTCGGGCGTCATGTCGACGCTGACGTCGGCCACCGTCGCCGGCCTC GTCGTCACCACGCAGCTCAGCTCCTTTACCAGGGGCGGCGCGCCGTCGTAG |
| Gene | >Hirsu2|2464 ATGGCCCCCGACTCGGCCGTGCCCGAACTGGCCGGCGACGGGATGCGCAACCCCCCTCTCAAACAGCAGCACGAT GCCGTCGTCTACGCGCAGACCGGCCTGGACCGCCACGGCGTCGAAAAGGCGCCCGTCGTCACGCCGCCCGACTAC AGCGACACGGAAAAGGCCGAGGCCGGCCATGGCTCGACGGAGCTGACGTCGGCCCCCGGCCCCGACGACGACGAC GGCCGCCGCCCCGCGCCCCTCCGCCTCCTCGTCCGCCACCGCCGCCTCCTCGTCCAGCTCTTGCTCTTCCTCGTC TTCACCGGCTGGTGGATCGCCTCCCTCGTCCTCCACCGCAACGACAAGAACTGGGTCGTGCCCTTCCTGCTGTGG CTCGCCATCACCCTCCGCCTCGTCTTCTACCACGTCCCCATCCGCTACGTCTCGGGCCCCATCCGCTGGCTGTGG CACCACTCGGCCGTCGTCGTCTACAACGCCATCCCCCCCCGCTTCCGCACCCCCGCCGGCGCCGCCGCCGCCGTC TCCGTCATCCTCCTCGGCTCCTTCGTCTCCGAGGAGAGCGCCGACAACACGCGCGCCAACCGCGCCGTCAGCCTC TTCGGCATGCTCGTCATCATCTTCGTCTTCTGGCTCACCAGCGCCGCCCGCTCCCACGTCAACTGGCGCACCGTC GTCGGCGGCATGCTGGCCCAGTACGTCATCGGCCTCTTCGTCCTGCGCACCACGGTCGGCTTCGACATCTTCAAG TTCATCGCCGACCGCGCCGGCGACCTGCTCGGCTTCGCCAAGGACGGCCTCGCCTTCCTCACCGACGACGAGGTG CCCAAGTCGACCTGGTTCCTGCTGACCGTCATCCCCGCCATCATCTTCTTCATCTCGCTCGTCCAGGTGCTCTAC TACATCGGCTTCCTCCAGTGGTTCATCCGCAAGTTCGCCGCCTTCGTCTTCTGGGCCCTCGGCGTCTCGGGCGCC GAGGCCGTCGTCGCCGCCGCCACCCCCTTCATCGGCCAGGGCGAGTCGGCCATGCTCGTCCGCCCCTTCGTCCCG CACATGACCAAGGCCGAGATCCACCAGATCATGACGTGCGGCTTCGCCACCATCTCCGGCTCCGTCCTCGTCGGC TACATCGGCCTCGGCCTCAACCCCGAGGCCCTCGTCTCGTCGTGCATCATGTCCATCCCGGCCTCGCTCGCCATC TCCAAGCTGCGCTACCCGGAGACGGAGGAGACGCTGACGGCCGGCCGCGTCGTCCTGCCCGACGACGACGAGGAG GGCCGCGCCGAGAACGCGCTGCACGCCTTCGCCAACGGCGCCTGGCTCGGCATCAAGATTGGCGGCACCATCGTC GCCTCGCTGCTGTGCACCCTTGCCGCCGTCGGCCTCATCAACGGCCTGCTGAGCTGGTGGGGCCGCTACCTCAAC ATCACCAACCCGGACCTGACGCTGCAGCTGATGCTGTCGTACATCCTGTACCCCGTCGCCTTCCTCCTCGGCGTC CCGCGCAACGGCGACATCCTCAAGGTCGCCAAGCTCATTGCCGAAAAGGTGGTTACCGTAGGTCGCTCTAGCCCG ACCGCCGCAGGTGAGAGCCGTGTCTTGCTGACGCCCGCGCGCAGAACGAGTTCAAGGCCTTTCAGAAGATGGCCA AGGACCCCGAGTTTGCCCCGATGTCGGCTCGGTCGCAGCTCATCGCCACCTACGCCCTGTGCGGCTTCGGCAACA TCGGCTCCATGGGCGTCCAGATCGGCATCCTCGGCCAGCTGGCGCCGTCGCGCGGCGGCGACGTGTCGAGGCTCG CGCTGTCGGCCCTCATCTCGGGCGTCATGTCGACGCTGACGTCGGCCACCGTCGCCGGCCTCGTCGTCACCACGC AGCTCAGCTCCTTTACCAGGGGCGGCGCGCCGTCGTAG |