Protein ID | Hirsu2|2463 |
Gene name | |
Location | Contig_159:29654..30371 |
Strand | + |
Gene length (bp) | 717 |
Transcript length (bp) | 717 |
Coding sequence length (bp) | 717 |
Protein length (aa) | 239 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.4585 | 0.4002 | 0.5145 | 0.0838 | 0.3028 | 0.3186 | 0.4074 | 0.2914 | 0.3236 | 0.1863 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 49 | 71 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 9072 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|2463 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2463 MQAVPDAQSFLPPGSRLALAAGSTSGALTLTCALWSLPFFFFAACRGRGPRLLSLPAAALLCLGFCLASPGRERD AVGATRHRYKKLVRAVAESAVSRRPSLSPPLPLLRRASPVAVLHVLLPVGRAIGRRRSRPLDLATLVSGLPWPSR AVVWIRHPCRAATSISRRPSARRRPLSASCRRKGLDLSLLRRLVLPLFDPAVLIPLEATLAGLIHTNETSTPLRP STHSSSPAHLRQA* |
Coding | >Hirsu2|2463 ATGCAGGCAGTCCCAGACGCCCAGTCGTTCCTCCCACCAGGTTCTCGCTTGGCTCTTGCCGCTGGCTCGACCTCT GGCGCGCTCACGCTCACGTGCGCCCTTTGGTCTCTGCCCTTCTTTTTCTTTGCTGCTTGTCGTGGCCGAGGCCCT CGTCTTCTCTCTCTGCCTGCAGCCGCCCTGCTTTGCCTTGGCTTTTGCCTTGCCTCTCCGGGACGCGAACGAGAC GCCGTGGGCGCGACGCGCCACCGCTACAAAAAGCTCGTCCGGGCCGTGGCCGAGTCTGCCGTCTCTAGGCGCCCC TCTCTCTCCCCCCCCCTTCCCCTTCTTCGTCGCGCATCTCCCGTCGCCGTCCTCCATGTGCTGCTACCCGTCGGT CGGGCGATAGGAAGGCGTCGGAGCCGGCCGCTTGACCTCGCCACTCTCGTCTCTGGCTTGCCCTGGCCGAGCCGA GCCGTCGTCTGGATCCGTCATCCTTGCCGCGCCGCCACGTCTATTTCTCGACGGCCGTCCGCTCGTCGCCGTCCG CTCAGCGCCTCTTGCCGGCGCAAAGGGCTGGACCTATCTCTTCTTCGACGACTTGTTTTGCCGCTTTTCGACCCG GCCGTCCTCATCCCTCTCGAGGCGACCTTGGCTGGACTAATTCATACCAACGAAACTTCAACCCCTCTCCGACCA TCCACCCATTCATCTTCTCCTGCCCACCTCCGGCAGGCCTGA |
Transcript | >Hirsu2|2463 ATGCAGGCAGTCCCAGACGCCCAGTCGTTCCTCCCACCAGGTTCTCGCTTGGCTCTTGCCGCTGGCTCGACCTCT GGCGCGCTCACGCTCACGTGCGCCCTTTGGTCTCTGCCCTTCTTTTTCTTTGCTGCTTGTCGTGGCCGAGGCCCT CGTCTTCTCTCTCTGCCTGCAGCCGCCCTGCTTTGCCTTGGCTTTTGCCTTGCCTCTCCGGGACGCGAACGAGAC GCCGTGGGCGCGACGCGCCACCGCTACAAAAAGCTCGTCCGGGCCGTGGCCGAGTCTGCCGTCTCTAGGCGCCCC TCTCTCTCCCCCCCCCTTCCCCTTCTTCGTCGCGCATCTCCCGTCGCCGTCCTCCATGTGCTGCTACCCGTCGGT CGGGCGATAGGAAGGCGTCGGAGCCGGCCGCTTGACCTCGCCACTCTCGTCTCTGGCTTGCCCTGGCCGAGCCGA GCCGTCGTCTGGATCCGTCATCCTTGCCGCGCCGCCACGTCTATTTCTCGACGGCCGTCCGCTCGTCGCCGTCCG CTCAGCGCCTCTTGCCGGCGCAAAGGGCTGGACCTATCTCTTCTTCGACGACTTGTTTTGCCGCTTTTCGACCCG GCCGTCCTCATCCCTCTCGAGGCGACCTTGGCTGGACTAATTCATACCAACGAAACTTCAACCCCTCTCCGACCA TCCACCCATTCATCTTCTCCTGCCCACCTCCGGCAGGCCTGA |
Gene | >Hirsu2|2463 ATGCAGGCAGTCCCAGACGCCCAGTCGTTCCTCCCACCAGGTTCTCGCTTGGCTCTTGCCGCTGGCTCGACCTCT GGCGCGCTCACGCTCACGTGCGCCCTTTGGTCTCTGCCCTTCTTTTTCTTTGCTGCTTGTCGTGGCCGAGGCCCT CGTCTTCTCTCTCTGCCTGCAGCCGCCCTGCTTTGCCTTGGCTTTTGCCTTGCCTCTCCGGGACGCGAACGAGAC GCCGTGGGCGCGACGCGCCACCGCTACAAAAAGCTCGTCCGGGCCGTGGCCGAGTCTGCCGTCTCTAGGCGCCCC TCTCTCTCCCCCCCCCTTCCCCTTCTTCGTCGCGCATCTCCCGTCGCCGTCCTCCATGTGCTGCTACCCGTCGGT CGGGCGATAGGAAGGCGTCGGAGCCGGCCGCTTGACCTCGCCACTCTCGTCTCTGGCTTGCCCTGGCCGAGCCGA GCCGTCGTCTGGATCCGTCATCCTTGCCGCGCCGCCACGTCTATTTCTCGACGGCCGTCCGCTCGTCGCCGTCCG CTCAGCGCCTCTTGCCGGCGCAAAGGGCTGGACCTATCTCTTCTTCGACGACTTGTTTTGCCGCTTTTCGACCCG GCCGTCCTCATCCCTCTCGAGGCGACCTTGGCTGGACTAATTCATACCAACGAAACTTCAACCCCTCTCCGACCA TCCACCCATTCATCTTCTCCTGCCCACCTCCGGCAGGCCTGA |