Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|246
Gene name
LocationContig_1044:5448..7448
Strand-
Gene length (bp)2000
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.526 0.5826 0.3689 0.094 0.3581 0.1052 0.1134 0.3268 0.2652 0.0262

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup9071
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|246 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|246
MPFLPGRVSKTAERDGGRWWWHVSLAPRLRRRTEGHVVKPRSSSRQKAGGCFVSSALQRAGGCFVSPARQKVGGF
FVSPARQKVGGFFVSSARQKAGGCFASSAIRRLPVMLRSAVRPPARESERWKLADETQQGPPAPQDGPIATFYYG
GANHACSLHAQQPRHPTPSQASHPQPGCPAPGSLQYLPGIGTYCSPQRRPLSNRHLSALDACRPLGLLKSPDSAT
NTSTNPRSRHLTDWDVATQPILPQVHAAEPKRRRLPRCMGLSCIVLDRVSVLGHASVLLRGLSEKVVPPPSVLY*
Coding >Hirsu2|246
ATGCCCTTTTTACCCGGACGCGTCAGCAAGACGGCGGAGCGAGATGGAGGTCGGTGGTGGTGGCACGTGTCTCTC
GCGCCTCGGCTCAGGCGTCGCACGGAAGGCCATGTGGTGAAGCCTCGCTCGTCCTCCCGTCAGAAGGCCGGCGGC
TGCTTCGTCTCGTCTGCCCTTCAGAGGGCTGGCGGTTGCTTCGTCTCGCCCGCCCGCCAGAAGGTTGGCGGTTTC
TTCGTCTCGCCCGCCCGCCAGAAGGTTGGCGGTTTCTTCGTCTCGTCCGCCCGTCAGAAGGCCGGCGGTTGCTTC
GCCTCGTCCGCCATCAGGAGGCTGCCGGTGATGCTGCGCTCGGCCGTCCGTCCACCGGCGAGGGAATCAGAGCGT
TGGAAGTTGGCCGACGAGACCCAGCAGGGCCCGCCTGCGCCACAGGACGGACCAATTGCTACCTTTTACTATGGC
GGAGCAAACCATGCATGCAGTCTTCATGCCCAGCAGCCCAGGCATCCCACCCCCAGCCAGGCATCCCACCCCCAG
CCAGGCTGCCCTGCCCCTGGCTCTCTTCAATACCTCCCTGGCATAGGCACATACTGTAGCCCACAGAGACGGCCG
TTGTCGAATCGCCATCTCTCCGCCCTCGACGCGTGCCGGCCGCTCGGACTGTTGAAATCGCCAGATTCGGCGACA
AACACCTCGACAAACCCTCGTTCGCGACACTTGACTGACTGGGACGTCGCGACTCAGCCGATTCTCCCTCAGGTT
CATGCCGCCGAGCCGAAACGTCGACGGCTGCCTCGTTGTATGGGTTTGTCCTGCATCGTCTTGGATCGAGTCAGC
GTTTTAGGACACGCCTCCGTCCTGCTTAGGGGGCTGAGCGAGAAAGTCGTGCCGCCGCCTTCTGTCCTGTATTAA
Transcript >Hirsu2|246
ATGCCCTTTTTACCCGGACGCGTCAGCAAGACGGCGGAGCGAGATGGAGGTCGGTGGTGGTGGCACGTGTCTCTC
GCGCCTCGGCTCAGGCGTCGCACGGAAGGCCATGTGGTGAAGCCTCGCTCGTCCTCCCGTCAGAAGGCCGGCGGC
TGCTTCGTCTCGTCTGCCCTTCAGAGGGCTGGCGGTTGCTTCGTCTCGCCCGCCCGCCAGAAGGTTGGCGGTTTC
TTCGTCTCGCCCGCCCGCCAGAAGGTTGGCGGTTTCTTCGTCTCGTCCGCCCGTCAGAAGGCCGGCGGTTGCTTC
GCCTCGTCCGCCATCAGGAGGCTGCCGGTGATGCTGCGCTCGGCCGTCCGTCCACCGGCGAGGGAATCAGAGCGT
TGGAAGTTGGCCGACGAGACCCAGCAGGGCCCGCCTGCGCCACAGGACGGACCAATTGCTACCTTTTACTATGGC
GGAGCAAACCATGCATGCAGTCTTCATGCCCAGCAGCCCAGGCATCCCACCCCCAGCCAGGCATCCCACCCCCAG
CCAGGCTGCCCTGCCCCTGGCTCTCTTCAATACCTCCCTGGCATAGGCACATACTGTAGCCCACAGAGACGGCCG
TTGTCGAATCGCCATCTCTCCGCCCTCGACGCGTGCCGGCCGCTCGGACTGTTGAAATCGCCAGATTCGGCGACA
AACACCTCGACAAACCCTCGTTCGCGACACTTGACTGACTGGGACGTCGCGACTCAGCCGATTCTCCCTCAGGTT
CATGCCGCCGAGCCGAAACGTCGACGGCTGCCTCGTTGTATGGGTTTGTCCTGCATCGTCTTGGATCGAGTCAGC
GTTTTAGGACACGCCTCCGTCCTGCTTAGGGGGCTGAGCGAGAAAGTCGTGCCGCCGCCTTCTGTCCTGTATTAA
Gene >Hirsu2|246
ATGGTGAGACTGCACAAGCCGGTCTTACGGGGTGCAAGGTTGTGGATCAGAGCATGAGTAGTTGGCCGGGTAAGG
CGAGACACGGCCGCCGCGGAGAACAAAGGGCTGACTCAGTTGGTAGCGCCCGGAGATGAAGAGACAGACTTCAGC
TGGGATCGACGCTGTTTCAGGCCTCGCGGGTGGATCAAACGAGGTGCCCGTGGCGAGCTTGCCTGGCTGGGCGGT
CCAGCAAGCATTCGAGGGCGAAAGGAAGGGCTCGTGATGGACCGTCGTCACGTGCGGCCGAATTGCAGGACAGCT
GTCGCGACAGGGCTCCGACCCTGGAGACGCCAGTCTGTGCTTGTCTTTTCTTTTCTTTAGCCCTTTTTACCCGGA
CGCGTCAGCAAGACGGCGGAGCGAGATGGAGGTCGGTGGTGGTGGCACGTGTCTCTCGCGCCTCGGCTCAGGCGT
CGCACGGAAGGCCATGTGGTGAAGCCTCGCTCGTCCTCCCGTCAGAAGGCCGGCGGCTGCTTCGTCTCGTCTGCC
CTTCAGAGGGCTGGCGGTTGCTTCGTCTCGCCCGCCCGCCAGAAGGTTGGCGGTTTCTTCGTCTCGCCCGCCCGC
CAGAAGGTTGGCGGTTTCTTCGTCTCGTCCGCCCGTCAGAAGGCCGGCGGTTGCTTCGCCTCGTCCGCCATCAGG
AGGCTGCCGGTGATGCTGCGCTCGGCCGTCCGTCCACCGGCGAGGGAATCAGAGCGTTGGAAGTTGGCCGACGAG
ACCCAGCAGGGCCCGCCTGCGCCACAGGACGGACCAATTGCTACCTTTTACTATGGCGGAGCAAACCATGCATGC
AGTCTTCATGCCCAGCAGCCCAGGCATCCCACCCCCAGCCAGGCATCCCACCCCCAGCCAGGCTGCCCTGCCCCT
GGCTCTCTTCAATACCTCCCTGGCATAGGCACATACTGTAGCCCGTAGGTGTGGGAATGCCAGCCCCGATCCATA
CGAGGGGAAAAAAAGTCCACAGAACAACTGATCGGGATCAGGCCCCGGAGGCTTACTTGTAACGTGCCCGCGCCT
GCAGCCGCCTCTCCTCCTCTCCTTGCTTTTTCTGCCGTCTTCTCCCCCTTTCCTTATCGCCCCTAACAGGCCCCC
TCATCTTCTTCACTGCCACCGTCTTCTTTGCCATTCTGTTGGGCCGCTGCTCTCTCTTTTTCTCTCTCTTCCCTT
TGCGTCATCGTCTTGTGATTTTTTTTTTTTGCTTGACTCGCTCCTCGCGACCCTGTCCTTTCTCGCGACGGCGTC
ACTGACTCTCGCGTCACTGACTCTTGCGACGGCGTCACAGACAGAGACGGCCGTTGTCGAATCGCCATCTCTCCG
CCCTCGACGCGTGCCGGCCGCTCGGACTGTTGAAATCGCCAGATTCGGCGACAAACACCTCGACAAACCCTCGTT
CGCGACACTTGACTGACTGGGACGTCGCGACTCAGCCGATTCTCCCTCAGGTTCATGCCGCCGAGCCGAAACGTC
GACGGCTGCCTCGTTGTATGGGTTTGTCCTGCATCGTCTTGGATCGAGTCAGGTACGTACATGACGAGCCTTGTT
CGAAGCCGAGAACGGTGATGCACGTCGGCGAACGCACTATTCCCTTGTGCCTCTTCATCATCATCATCATCATCA
CCAACGTCATCATCTGCCTCTTCATCTTCGTCGTTTCCGCCAGATCTTCGTCGTTTCCGCCAGAAGCCCTGCGGG
CCGCGCGCGAGCGAGTCATTTTTTTTGCTGCGCCGCCACGCCTGTGATGAAGCCATGCCGCCCTCTCTTGACATC
ACCCCCCGGCTCTGGCCCGGCTTGCTGCATGCCAATGGATCCATCTGTTTGGCGAGCTCTCGCCCACCCGTCCGC
ATCCTTGCCCCCCCGTCCGCATCCTTGCCCCCTTCTAATGGCCAGCCAGCGTTTTAGGACACGCCTCCGTCCTGC
TTAGGGGGCTGAGCGAGAAAGTCGTGCCGCCGCCTTCTGTCCTGTATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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