© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2446 |
| Gene name | |
| Location | Contig_1585:5427..5812 |
| Strand | + |
| Gene length (bp) | 385 |
| Transcript length (bp) | 333 |
| Coding sequence length (bp) | 333 |
| Protein length (aa) | 111 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2401 | 0.9278 | 0.0805 | 0.0468 | 0.0392 | 0.0217 | 0.0484 | 0.0213 | 0.018 | 0.0516 |
| Orthofinder run ID | 4 |
| Orthogroup | 6977 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2446 (this protein) |
| Ophiocordyceps subramaniannii | Hirsu2|6355 |
| Ophiocordyceps subramaniannii | Hirsu2|8433 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2446 MDDRGEYSSGMKRGIPKSHLRLAANLPLAEEAIGRSFICEAELAASILTNFEEPKVPGTSSSANSTKRRRRESGQ RSSAKHRKFSSVLDDSKLPCLKESGGRLTLYLRRG* |
| Coding | >Hirsu2|2446 ATGGATGACAGGGGCGAATACTCATCTGGCATGAAAAGGGGCATTCCCAAAAGCCACCTGAGGCTGGCTGCTAAC TTGCCTCTTGCCGAGGAAGCCATCGGAAGATCATTCATTTGCGAAGCAGAGCTGGCGGCTAGTATCCTAACGAAC TTTGAGGAACCAAAAGTCCCAGGCACATCTTCCTCAGCAAACAGTACTAAAAGGAGACGAAGAGAATCTGGGCAA CGATCTTCAGCCAAGCACCGAAAGTTTAGCTCTGTCCTCGACGACTCGAAACTGCCTTGCTTGAAGGAAAGCGGT GGCCGATTGACCCTTTACCTGAGACGTGGCTGA |
| Transcript | >Hirsu2|2446 ATGGATGACAGGGGCGAATACTCATCTGGCATGAAAAGGGGCATTCCCAAAAGCCACCTGAGGCTGGCTGCTAAC TTGCCTCTTGCCGAGGAAGCCATCGGAAGATCATTCATTTGCGAAGCAGAGCTGGCGGCTAGTATCCTAACGAAC TTTGAGGAACCAAAAGTCCCAGGCACATCTTCCTCAGCAAACAGTACTAAAAGGAGACGAAGAGAATCTGGGCAA CGATCTTCAGCCAAGCACCGAAAGTTTAGCTCTGTCCTCGACGACTCGAAACTGCCTTGCTTGAAGGAAAGCGGT GGCCGATTGACCCTTTACCTGAGACGTGGCTGA |
| Gene | >Hirsu2|2446 ATGGATGACAGGGGCGAATACTCATCTGGCATGAAAAGGGGCATTCCCAAAAGCCACCTGAGGCTGGCTGCTAAC TTGCCTCTTGCCGAGGAAGCCATCGGAAGATCATTCATTTGCGAAGCAGAGCTGGCGGCTAGTATCCTAACGAAC TTTGAGGAACCAAAAGTCCCAGGCACATCTTCCTCAGCAAACAGTACTAAAAGGAGACGAAGAGAATCTGGGCAA CGATCTTCAGGTGAGTAAGACTGAGACTCAGTTTTACGTTAACAAACTGACCATTTTCTTAGCCAAGCACCGAAA GTTTAGCTCTGTCCTCGACGACTCGAAACTGCCTTGCTTGAAGGAAAGCGGTGGCCGATTGACCCTTTACCTGAG ACGTGGCTGA |