Protein ID | Hirsu2|2439 |
Gene name | |
Location | Contig_1583:49..346 |
Strand | - |
Gene length (bp) | 297 |
Transcript length (bp) | 297 |
Coding sequence length (bp) | 297 |
Protein length (aa) | 99 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P24521|ERG8_YEAST | Phosphomevalonate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG8 PE=1 SV=2 | 17 | 94 | 5.0E-15 |
sp|Q9UT88|ERG8_SCHPO | Probable phosphomevalonate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg8 PE=3 SV=1 | 16 | 80 | 4.0E-11 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | 0.4552 | 0.5399 | 0.0649 | 0.1632 | 0.4484 | 0.038 | 0.3208 | 0.262 | 0.1507 | 0.3296 |
Orthofinder run ID | 4 |
Orthogroup | 2087 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2439 MPSTRKTAPARRPPTVAVSAPGKVLLAGGYLVLDRRYSGLVFGLSARINVVAGEIHTSEGVQLSEIVVDSPQFVE AQWRYGYHLAPDGGGIKVTQLQV* |
Coding | >Hirsu2|2439 ATGCCGTCGACGAGGAAGACGGCTCCGGCGCGGCGGCCGCCGACGGTGGCCGTCTCGGCGCCGGGCAAGGTGCTG CTGGCGGGCGGCTACCTGGTGCTGGACCGGCGGTACTCGGGGCTCGTGTTCGGGCTGAGCGCGCGCATCAACGTC GTCGCCGGCGAGATCCACACGAGCGAGGGCGTCCAGCTGAGCGAGATCGTCGTCGACAGCCCGCAGTTCGTCGAG GCCCAGTGGCGCTACGGCTATCACCTGGCGCCCGACGGCGGCGGCATCAAGGTGACGCAGCTGCAGGTGTAA |
Transcript | >Hirsu2|2439 ATGCCGTCGACGAGGAAGACGGCTCCGGCGCGGCGGCCGCCGACGGTGGCCGTCTCGGCGCCGGGCAAGGTGCTG CTGGCGGGCGGCTACCTGGTGCTGGACCGGCGGTACTCGGGGCTCGTGTTCGGGCTGAGCGCGCGCATCAACGTC GTCGCCGGCGAGATCCACACGAGCGAGGGCGTCCAGCTGAGCGAGATCGTCGTCGACAGCCCGCAGTTCGTCGAG GCCCAGTGGCGCTACGGCTATCACCTGGCGCCCGACGGCGGCGGCATCAAGGTGACGCAGCTGCAGGTGTAA |
Gene | >Hirsu2|2439 ATGCCGTCGACGAGGAAGACGGCTCCGGCGCGGCGGCCGCCGACGGTGGCCGTCTCGGCGCCGGGCAAGGTGCTG CTGGCGGGCGGCTACCTGGTGCTGGACCGGCGGTACTCGGGGCTCGTGTTCGGGCTGAGCGCGCGCATCAACGTC GTCGCCGGCGAGATCCACACGAGCGAGGGCGTCCAGCTGAGCGAGATCGTCGTCGACAGCCCGCAGTTCGTCGAG GCCCAGTGGCGCTACGGCTATCACCTGGCGCCCGACGGCGGCGGCATCAAGGTGACGCAGCTGCAGGTGTAA |