© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2434 |
| Gene name | |
| Location | Contig_158:31567..32304 |
| Strand | - |
| Gene length (bp) | 737 |
| Transcript length (bp) | 648 |
| Coding sequence length (bp) | 648 |
| Protein length (aa) | 216 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.599 | 0.5675 | 0.3458 | 0.1023 | 0.1718 | 0.1044 | 0.143 | 0.1629 | 0.1572 | 0.0311 |
| Orthofinder run ID | 4 |
| Orthogroup | 9065 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2434 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2434 MRPRMGRLWPPPDDPPPAAGGDEPNCCPSKRRGRRRPSPARPFQPAYAEAGPVLPAHAPCMHALLRSPPWAAGAG ERRAAPAQGTLQLSSPISHELSSPAPVAEPGASPGADLVPGLLPSITLLADGAERSHRLVVVATTRHARLLAACP DQTRVTSFLLHDDNQRHASDIEKKNIRRIARPPRAATAADAARPPETDQGLPATAKNRVPPSAGS* |
| Coding | >Hirsu2|2434 ATGCGGCCCCGGATGGGTCGCCTCTGGCCTCCACCGGACGATCCACCGCCGGCCGCGGGTGGGGACGAGCCAAAT TGCTGTCCGTCGAAGCGCCGTGGCCGCCGTCGTCCAAGCCCTGCCCGGCCCTTCCAGCCTGCCTATGCCGAGGCT GGACCCGTACTTCCAGCACACGCCCCCTGTATGCACGCACTACTGAGATCCCCGCCGTGGGCGGCGGGGGCGGGG GAGCGACGCGCCGCCCCGGCCCAAGGAACCCTTCAGCTGTCCAGCCCGATTTCGCACGAGCTTAGCTCTCCAGCC CCCGTCGCCGAGCCCGGGGCCTCCCCTGGAGCCGACCTGGTCCCCGGGCTACTGCCATCCATCACGCTGCTTGCT GACGGGGCTGAGCGAAGCCATCGTCTTGTCGTCGTCGCCACGACGCGTCACGCCCGTCTCTTGGCCGCGTGCCCC GACCAGACCAGGGTGACCAGCTTTCTTCTTCATGACGACAATCAACGACACGCCTCCGACATAGAAAAAAAAAAC ATACGCCGCATTGCGAGGCCGCCCCGTGCCGCGACAGCCGCTGACGCCGCGCGGCCGCCCGAGACGGACCAAGGC CTGCCCGCGACGGCGAAGAACCGCGTCCCCCCTTCGGCCGGCAGCTGA |
| Transcript | >Hirsu2|2434 ATGCGGCCCCGGATGGGTCGCCTCTGGCCTCCACCGGACGATCCACCGCCGGCCGCGGGTGGGGACGAGCCAAAT TGCTGTCCGTCGAAGCGCCGTGGCCGCCGTCGTCCAAGCCCTGCCCGGCCCTTCCAGCCTGCCTATGCCGAGGCT GGACCCGTACTTCCAGCACACGCCCCCTGTATGCACGCACTACTGAGATCCCCGCCGTGGGCGGCGGGGGCGGGG GAGCGACGCGCCGCCCCGGCCCAAGGAACCCTTCAGCTGTCCAGCCCGATTTCGCACGAGCTTAGCTCTCCAGCC CCCGTCGCCGAGCCCGGGGCCTCCCCTGGAGCCGACCTGGTCCCCGGGCTACTGCCATCCATCACGCTGCTTGCT GACGGGGCTGAGCGAAGCCATCGTCTTGTCGTCGTCGCCACGACGCGTCACGCCCGTCTCTTGGCCGCGTGCCCC GACCAGACCAGGGTGACCAGCTTTCTTCTTCATGACGACAATCAACGACACGCCTCCGACATAGAAAAAAAAAAC ATACGCCGCATTGCGAGGCCGCCCCGTGCCGCGACAGCCGCTGACGCCGCGCGGCCGCCCGAGACGGACCAAGGC CTGCCCGCGACGGCGAAGAACCGCGTCCCCCCTTCGGCCGGCAGCTGA |
| Gene | >Hirsu2|2434 ATGCGGCCCCGGATGGGTCGCCTCTGGCCTCCACCGGACGATCCACCGCCGGCCGCGGGTGGGGACGAGCCAAAT TGTAGGTGCTTTCGTCTGCTCCATCGCCGGCCAAACGGACGGGCTGTCAACTGCCTGCTACATGGCTACTGCAGG ACCCGAGTCTTCCAGGCTGTCCGTCGAAGCGCCGTGGCCGCCGTCGTCCAAGCCCTGCCCGGCCCTTCCAGCCTG CCTATGCCGAGGCTGGACCCGTACTTCCAGCACACGCCCCCTGTATGCACGCACTACTGAGATCCCCGCCGTGGG CGGCGGGGGCGGGGGAGCGACGCGCCGCCCCGGCCCAAGGAACCCTTCAGCTGTCCAGCCCGATTTCGCACGAGC TTAGCTCTCCAGCCCCCGTCGCCGAGCCCGGGGCCTCCCCTGGAGCCGACCTGGTCCCCGGGCTACTGCCATCCA TCACGCTGCTTGCTGACGGGGCTGAGCGAAGCCATCGTCTTGTCGTCGTCGCCACGACGCGTCACGCCCGTCTCT TGGCCGCGTGCCCCGACCAGACCAGGGTGACCAGCTTTCTTCTTCATGACGACAATCAACGACACGCCTCCGACA TAGAAAAAAAAAACATACGCCGCATTGCGAGGCCGCCCCGTGCCGCGACAGCCGCTGACGCCGCGCGGCCGCCCG AGACGGACCAAGGCCTGCCCGCGACGGCGAAGAACCGCGTCCCCCCTTCGGCCGGCAGCTGA |