Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2432
Gene name
LocationContig_158:28455..29541
Strand+
Gene length (bp)1086
Transcript length (bp)1008
Coding sequence length (bp)1008
Protein length (aa) 336

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.0837 0.0577 0.41 0.1078 0.1196 0.0539 0.62 0.4182 0.4184 0.0218

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999567

Transmembrane Domains

Domain # Start End Length
1 287 309 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2085
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|870
Ophiocordyceps australis map64 (Brazil) OphauB2|2199
Ophiocordyceps camponoti-floridani Ophcf2|05511
Ophiocordyceps camponoti-rufipedis Ophun1|112
Ophiocordyceps kimflemingae Ophio5|7911
Ophiocordyceps subramaniannii Hirsu2|2432 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2432
MRFKVTTATLFVLAAAEPGRSFISPSDIILGARDVLSLPYLSSTTATPGGGSPLVRRQTASDSLQLGPGDGANSS
AWDRETDAACVEALRAIERSTNPSGNCLCYNLPSLDTKTGIFNADLRLYRISEPREGFIDVPPSKIKVGVQYNGA
SVSLATPKDMQAMGMTGSANSSAPPAVLRREEAKGPQQLQKYMFVGQIDKDRMADAMSMATLEALVMPTFTLTAQ
DTKGGAVSTNVSLNEAAFLNGVFSKQVVRSDFASAQAAVDAKLAAVRNGTVAFVLPGVQLMVFPIGLIITSVWLL
LGLTAYGIGTYERTMYAHTYKRRLGIPLGGVRKGF*
Coding >Hirsu2|2432
ATGCGGTTCAAAGTGACGACGGCGACCTTGTTCGTCCTGGCCGCGGCCGAGCCCGGCCGCTCCTTCATCTCGCCG
TCGGACATCATCCTCGGCGCGCGCGACGTGCTGTCGCTGCCGTACCTGTCGTCGACGACGGCGACGCCCGGCGGC
GGCAGCCCGCTGGTGCGGCGACAGACGGCGTCGGACTCGCTGCAGCTGGGCCCCGGCGACGGGGCCAACTCGTCG
GCCTGGGACCGCGAGACGGACGCGGCCTGCGTCGAGGCGCTGCGGGCCATCGAGCGGAGCACCAACCCGTCCGGC
AACTGCCTCTGCTACAACCTGCCGTCTCTCGACACCAAGACGGGCATCTTCAACGCCGACCTGCGCCTGTACCGC
ATCTCGGAGCCGCGCGAGGGCTTCATCGACGTCCCGCCCAGCAAGATCAAGGTCGGCGTCCAGTACAACGGCGCG
AGCGTCAGCCTCGCCACCCCCAAGGACATGCAGGCCATGGGCATGACCGGCTCCGCCAACTCGTCCGCGCCGCCC
GCCGTCCTGAGACGCGAAGAGGCCAAGGGGCCGCAGCAGCTGCAGAAGTACATGTTCGTCGGCCAGATCGACAAA
GACCGGATGGCCGACGCAATGTCCATGGCCACGCTGGAAGCGCTCGTGATGCCGACCTTCACCCTGACGGCGCAG
GACACCAAGGGCGGCGCCGTAAGCACCAACGTCTCGCTCAACGAGGCCGCCTTCCTCAACGGCGTCTTCTCCAAG
CAGGTCGTCCGGTCCGACTTCGCCTCGGCCCAGGCCGCCGTCGACGCCAAGCTGGCAGCCGTGCGCAACGGCACC
GTCGCCTTCGTCCTGCCCGGCGTCCAGCTGATGGTCTTCCCCATCGGCCTCATCATCACCAGCGTCTGGCTGCTG
CTCGGCCTCACCGCCTACGGCATCGGCACCTACGAGCGCACCATGTACGCCCACACCTACAAGCGCCGCCTCGGC
ATACCCCTCGGCGGCGTCAGGAAGGGCTTCTGA
Transcript >Hirsu2|2432
ATGCGGTTCAAAGTGACGACGGCGACCTTGTTCGTCCTGGCCGCGGCCGAGCCCGGCCGCTCCTTCATCTCGCCG
TCGGACATCATCCTCGGCGCGCGCGACGTGCTGTCGCTGCCGTACCTGTCGTCGACGACGGCGACGCCCGGCGGC
GGCAGCCCGCTGGTGCGGCGACAGACGGCGTCGGACTCGCTGCAGCTGGGCCCCGGCGACGGGGCCAACTCGTCG
GCCTGGGACCGCGAGACGGACGCGGCCTGCGTCGAGGCGCTGCGGGCCATCGAGCGGAGCACCAACCCGTCCGGC
AACTGCCTCTGCTACAACCTGCCGTCTCTCGACACCAAGACGGGCATCTTCAACGCCGACCTGCGCCTGTACCGC
ATCTCGGAGCCGCGCGAGGGCTTCATCGACGTCCCGCCCAGCAAGATCAAGGTCGGCGTCCAGTACAACGGCGCG
AGCGTCAGCCTCGCCACCCCCAAGGACATGCAGGCCATGGGCATGACCGGCTCCGCCAACTCGTCCGCGCCGCCC
GCCGTCCTGAGACGCGAAGAGGCCAAGGGGCCGCAGCAGCTGCAGAAGTACATGTTCGTCGGCCAGATCGACAAA
GACCGGATGGCCGACGCAATGTCCATGGCCACGCTGGAAGCGCTCGTGATGCCGACCTTCACCCTGACGGCGCAG
GACACCAAGGGCGGCGCCGTAAGCACCAACGTCTCGCTCAACGAGGCCGCCTTCCTCAACGGCGTCTTCTCCAAG
CAGGTCGTCCGGTCCGACTTCGCCTCGGCCCAGGCCGCCGTCGACGCCAAGCTGGCAGCCGTGCGCAACGGCACC
GTCGCCTTCGTCCTGCCCGGCGTCCAGCTGATGGTCTTCCCCATCGGCCTCATCATCACCAGCGTCTGGCTGCTG
CTCGGCCTCACCGCCTACGGCATCGGCACCTACGAGCGCACCATGTACGCCCACACCTACAAGCGCCGCCTCGGC
ATACCCCTCGGCGGCGTCAGGAAGGGCTTCTGA
Gene >Hirsu2|2432
ATGCGGTTCAAAGTGACGACGGCGACCTTGTTCGTCCTGGCCGCGGCCGAGCCCGGCCGCTCCTTCATCTCGCCG
TCGGACATCATCCTCGGCGCGCGCGACGTGCTGTCGCTGCCGTACCTGTCGTCGACGACGGCGACGCCCGGCGGC
GGCAGCCCGCTGGTGCGGCGACAGACGGCGTCGGACTCGCTGCAGCTGGGCCCCGGCGACGGGGCCAACTCGTCG
GCCTGGGACCGCGAGACGGACGCGGCCTGCGTCGAGGCGCTGCGGGCCATCGAGCGGAGCACCAACCCGTCCGGC
AACTGCCTCTGCTACAACCTGCCGTCTCTCGACACCAAGACGGGCATCTTCAACGCCGACCTGCGCCTGTACCGC
ATCTCGGAGCCGCGCGAGGGCTTCATCGACGTCCCGCCCAGCAAGATCAAGGTCGGCGTCCAGTACAACGGCGCG
AGCGTCAGCCTCGCCACCCCCAAGGACATGCAGGCCATGGGCATGACCGGCTCCGCCAACTCGTCCGCGCCGCCC
GCCGTCCTGAGACGCGAAGAGGCCAAGGGGCCGCAGCAGCTGCAGAAGTACATGTTCGTCGGCCAGATCGACAAA
GACCGGATGGCCGACGCAATGTCCATGTAAGTGTCGGGTACAGGCGAGGAACAAAGACGGACGAGGGAGGAGACC
AAACCGGCTGACCGATGTTCTCCGCACAGGGCCACGCTGGAAGCGCTCGTGATGCCGACCTTCACCCTGACGGCG
CAGGACACCAAGGGCGGCGCCGTAAGCACCAACGTCTCGCTCAACGAGGCCGCCTTCCTCAACGGCGTCTTCTCC
AAGCAGGTCGTCCGGTCCGACTTCGCCTCGGCCCAGGCCGCCGTCGACGCCAAGCTGGCAGCCGTGCGCAACGGC
ACCGTCGCCTTCGTCCTGCCCGGCGTCCAGCTGATGGTCTTCCCCATCGGCCTCATCATCACCAGCGTCTGGCTG
CTGCTCGGCCTCACCGCCTACGGCATCGGCACCTACGAGCGCACCATGTACGCCCACACCTACAAGCGCCGCCTC
GGCATACCCCTCGGCGGCGTCAGGAAGGGCTTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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