Protein ID | Hirsu2|2427 |
Gene name | |
Location | Contig_158:13168..14721 |
Strand | - |
Gene length (bp) | 1553 |
Transcript length (bp) | 1365 |
Coding sequence length (bp) | 1365 |
Protein length (aa) | 455 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13641 | Glyco_tranf_2_3 | Glycosyltransferase like family 2 | 2.6E-26 | 27 | 236 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 262 | 284 | 22 |
2 | 299 | 317 | 18 |
3 | 319 | 341 | 22 |
4 | 356 | 378 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2427 MLFEKDPPPAAEYLDANPRAAEQRKRETALLIPCHKSAGILPGTLRAALRIFPPENVFVVANGDSATPLDNTADV CRAHGVHHVWSPVGSKLVAQFVGCFAAERFKYVLMIDDDCALPPDFPVVSDRIAGRVRCVGYTIKSVGAASSRGT ACQQAQDLEYKLSGLQRALAGAVGSCMFPHGAISLWDREFLVGTFRHHPGFSISEDWFTGDSCRSLGGRIKMCSA VFVETETPAALFLGGAGCRGGFGEMTVFKQRFLRWNFFFVNGLWYNLRYLLLSWRLGWWEIGTKFFVFQEVYETL LYILTPITLPISFLVSWRFCSYLVLVTVALYMINIIIFNEVHLRLKKERVGLVVLLLYFPFYKLALLLVNIGSCY WAVFKYAKYFAKRHPKIVEDEKSLEIVLKLQQDGLKSSECLHTRAAAAALCGNTNEKMNGNRSSAYSSSLGHPGC CCLC* |
Coding | >Hirsu2|2427 ATGCTGTTCGAGAAGGACCCGCCGCCGGCCGCAGAATACCTGGACGCCAACCCGCGGGCGGCAGAGCAGAGGAAG CGCGAGACGGCGCTGCTGATCCCGTGCCACAAGTCGGCCGGGATCCTCCCGGGCACGCTCCGGGCAGCGCTGCGC ATCTTCCCGCCGGAGAACGTCTTCGTCGTCGCCAACGGCGACTCGGCGACGCCGCTCGACAACACGGCCGACGTG TGCCGCGCGCACGGCGTCCACCACGTCTGGTCACCGGTCGGCTCCAAGCTGGTGGCCCAGTTCGTCGGCTGCTTC GCGGCCGAGCGGTTCAAGTATGTGCTCATGATCGACGACGACTGCGCGCTGCCGCCCGACTTCCCCGTCGTCAGC GACCGCATCGCCGGCCGCGTCCGCTGCGTCGGCTACACCATCAAGAGCGTCGGCGCCGCCTCGTCCCGCGGCACG GCCTGCCAGCAGGCCCAGGACCTCGAGTACAAGCTGTCGGGCCTGCAGCGGGCCCTGGCCGGCGCCGTCGGCAGC TGCATGTTCCCGCACGGCGCCATCTCCCTCTGGGATCGCGAGTTCCTCGTCGGTACCTTTCGCCACCACCCGGGC TTCTCCATCTCCGAGGACTGGTTCACGGGAGACAGCTGCCGCAGCCTCGGCGGCCGCATCAAGATGTGCTCGGCC GTCTTCGTCGAGACCGAGACGCCCGCCGCCCTCTTCCTCGGCGGGGCCGGCTGCCGCGGCGGCTTCGGCGAGATG ACCGTCTTCAAGCAGCGATTCCTGCGCTGGAACTTCTTCTTCGTCAACGGCCTGTGGTACAATCTCCGCTATCTC CTCCTCAGTTGGCGGCTCGGCTGGTGGGAGATTGGGACCAAGTTTTTTGTTTTTCAAGAGGTCTACGAGACTCTT CTTTACATCCTGACACCTATCACGCTCCCTATATCCTTCCTGGTCAGCTGGCGCTTTTGCTCCTATCTTGTGCTC GTCACGGTCGCGCTGTACATGATCAATATCATCATCTTCAACGAGGTTCACTTGCGTCTGAAGAAGGAGAGAGTC GGCTTAGTGGTACTTCTGTTATACTTTCCGTTTTACAAGCTTGCGCTTTTACTCGTCAACATTGGCAGTTGTTAC TGGGCTGTCTTCAAATACGCCAAATACTTCGCCAAACGCCATCCCAAGATCGTGGAAGACGAGAAGTCGCTGGAA ATCGTGTTGAAGCTCCAGCAGGATGGCCTCAAGAGCAGTGAGTGCTTACACACGAGAGCAGCTGCCGCCGCACTG TGCGGTAATACCAACGAGAAGATGAACGGGAATCGATCGTCGGCGTATTCAAGTTCACTGGGCCACCCTGGCTGC TGCTGCCTTTGTTGA |
Transcript | >Hirsu2|2427 ATGCTGTTCGAGAAGGACCCGCCGCCGGCCGCAGAATACCTGGACGCCAACCCGCGGGCGGCAGAGCAGAGGAAG CGCGAGACGGCGCTGCTGATCCCGTGCCACAAGTCGGCCGGGATCCTCCCGGGCACGCTCCGGGCAGCGCTGCGC ATCTTCCCGCCGGAGAACGTCTTCGTCGTCGCCAACGGCGACTCGGCGACGCCGCTCGACAACACGGCCGACGTG TGCCGCGCGCACGGCGTCCACCACGTCTGGTCACCGGTCGGCTCCAAGCTGGTGGCCCAGTTCGTCGGCTGCTTC GCGGCCGAGCGGTTCAAGTATGTGCTCATGATCGACGACGACTGCGCGCTGCCGCCCGACTTCCCCGTCGTCAGC GACCGCATCGCCGGCCGCGTCCGCTGCGTCGGCTACACCATCAAGAGCGTCGGCGCCGCCTCGTCCCGCGGCACG GCCTGCCAGCAGGCCCAGGACCTCGAGTACAAGCTGTCGGGCCTGCAGCGGGCCCTGGCCGGCGCCGTCGGCAGC TGCATGTTCCCGCACGGCGCCATCTCCCTCTGGGATCGCGAGTTCCTCGTCGGTACCTTTCGCCACCACCCGGGC TTCTCCATCTCCGAGGACTGGTTCACGGGAGACAGCTGCCGCAGCCTCGGCGGCCGCATCAAGATGTGCTCGGCC GTCTTCGTCGAGACCGAGACGCCCGCCGCCCTCTTCCTCGGCGGGGCCGGCTGCCGCGGCGGCTTCGGCGAGATG ACCGTCTTCAAGCAGCGATTCCTGCGCTGGAACTTCTTCTTCGTCAACGGCCTGTGGTACAATCTCCGCTATCTC CTCCTCAGTTGGCGGCTCGGCTGGTGGGAGATTGGGACCAAGTTTTTTGTTTTTCAAGAGGTCTACGAGACTCTT CTTTACATCCTGACACCTATCACGCTCCCTATATCCTTCCTGGTCAGCTGGCGCTTTTGCTCCTATCTTGTGCTC GTCACGGTCGCGCTGTACATGATCAATATCATCATCTTCAACGAGGTTCACTTGCGTCTGAAGAAGGAGAGAGTC GGCTTAGTGGTACTTCTGTTATACTTTCCGTTTTACAAGCTTGCGCTTTTACTCGTCAACATTGGCAGTTGTTAC TGGGCTGTCTTCAAATACGCCAAATACTTCGCCAAACGCCATCCCAAGATCGTGGAAGACGAGAAGTCGCTGGAA ATCGTGTTGAAGCTCCAGCAGGATGGCCTCAAGAGCAGTGAGTGCTTACACACGAGAGCAGCTGCCGCCGCACTG TGCGGTAATACCAACGAGAAGATGAACGGGAATCGATCGTCGGCGTATTCAAGTTCACTGGGCCACCCTGGCTGC TGCTGCCTTTGTTGA |
Gene | >Hirsu2|2427 ATGCTGTTCGAGAAGGACCCGCCGCCGGCCGCAGAATACCTGGACGCCAACCCGCGGGCGGCAGAGCAGAGGAAG CGCGAGACGGCGCTGCTGATCCCGTGCCACAAGTCGGCCGGGATCCTCCCGGGCACGCTCCGGGCAGCGCTGCGC ATCTTCCCGCCGGAGAACGTCTTCGTCGTCGCCAACGGCGACTCGGCGACGCCGCTCGACAACACGGCCGACGTG TGCCGCGCGCACGGCGTCCACCACGTCTGGTCACCGGTCGGCTCCAAGCTGGTGGCCCAGTTCGTCGGCTGCTTC GCGGCCGAGCGGTTCAAGTATGTGCTCATGATCGACGACGACTGCGCGCTGCCGCCCGACTTCCCCGTCGTCAGC GACCGCATCGCCGGCCGCGTCCGCTGCGTCGGCTACACCATCAAGAGCGTCGGCGCCGCCTCGTCCCGCGGCACG GCCTGCCAGCAGGCCCAGGACCTCGAGTACAAGCTGTCGGGCCTGCAGCGGGCCCTGGCCGGCGCCGTCGGCAGC TGCATGTTCCCGCACGGCGCCATCTCCCTCTGGGATCGCGAGTTCCTCGTCGGTACCTTTCGCCACCACCCGGGC TTCTCCATCTCCGAGGACTGGTTCACGGGAGACAGCTGCCGCAGCCTCGGCGGCCGCATCAAGATGTGCTCGGCC GTCTTCGTCGAGACCGAGACGCCCGCCGCCCTCTTCCTCGGCGGGGCCGGCTGCCGCGGCGGCTTCGGCGAGATG ACCGTCTTCAAGCAGCGATTCCTGCGCTGGAACTTCTTCTTCGTCAACGGCCTGTGGTACAATCTCCGCTATCTC CTCCTCAGTTGGCGGCTCGGCTGGTGGGAGATTGGGACCAAGTTTTTTGTTTTTCAAGAGGTGAGTTCATCTGTT TGGGGGGGGGGGGGGGGGGTTCCCCTAATTCGAACGCCCCCGTAATCATTGATGTCACAGAGCGGCACTAATTCG AGGCTTTGACTGACGCAAAAATACTGCTAGGTCTACGAGACTCTTCTTTACATCCTGACACCTATCACGCTCCCT ATATCCTTCCTGGTCAGCTGGCGCTTTTGCTCCTATCTTGTGCTCGTCACGGTCGCGCTGTACATGATCAATATC ATCATCTTCAACGAGGTTCACTTGCGTCTGAAGAAGGAGAGAGTCGGCTTAGTGGTACTTCTGTTATACTTTGTA AGTGAGGCAGTCTGCCCTTCGTGATGTCCTGTAACTTGGATGCTGACCTATCTCTCATAACGAAGCCGTTTTACA AGCTTGCGCTTTTACTCGTCAACATTGGCAGTTGTTACTGGGCTGTCTTCAAATACGCCAAATACTTCGCCAAAC GCCATCCCAAGATCGTGGAAGACGAGAAGTCGCTGGAAATCGTGTTGAAGCTCCAGCAGGATGGCCTCAAGAGCA GTGAGTGCTTACACACGAGAGCAGCTGCCGCCGCACTGTGCGGTAATACCAACGAGAAGATGAACGGGAATCGAT CGTCGGCGTATTCAAGTTCACTGGGCCACCCTGGCTGCTGCTGCCTTTGTTGA |