Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2426
Gene name
LocationContig_158:11980..12982
Strand+
Gene length (bp)1002
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 1.7E-06 92 292

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 57 322 1.0E-09
sp|P45798|GUB_RHOMR Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 62 319 3.0E-06

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2426
MAWLRLSVSVLALTRLTDANQGQDIAPSSDEPQDRLVKVALPEGFSHRLFYDDFSSEEPGSLPSRQRWKLDLGIA
YPDGPEHWGTGEVQIYTDNRSNIAITNEGTLKITPIRLDNGTWTSARIETTPEGDFACQAGQRVRVQARIKLGDD
PEERQMGIWPCFWALGSAIRERLRDALQLGEIDIMETINGRSELWHVVHCGTGPRGPCNEYDGLNHAVAGVARGQ
WHTVAWEIDRRSGSPRAEESMRWYVDGRLSWTLLESQIQDESAWTALVGNSRILLLNVAVGGGFPNGVSGIKTPT
NMTLGGDGASMEVDYVAVFASEADGGGSHVIWN*
Coding >Hirsu2|2426
ATGGCTTGGCTGCGCCTTTCGGTGTCCGTCCTTGCTCTGACACGGCTCACAGATGCCAACCAAGGCCAAGACATC
GCCCCCTCTTCTGACGAGCCCCAAGACAGGCTGGTGAAAGTAGCTCTGCCTGAAGGATTCAGCCATCGTCTATTC
TACGACGACTTCTCCTCGGAGGAACCAGGCTCGCTTCCTTCCCGCCAACGATGGAAGTTGGACCTCGGCATAGCG
TACCCCGACGGCCCGGAGCATTGGGGCACGGGTGAGGTACAAATCTACACGGATAACCGATCCAACATCGCCATA
ACGAACGAGGGTACACTCAAGATCACCCCTATTCGTCTTGACAACGGGACATGGACTTCCGCGCGCATCGAGACG
ACGCCGGAAGGGGACTTTGCCTGTCAGGCTGGTCAACGAGTGCGCGTCCAGGCCCGAATCAAGCTCGGCGATGAC
CCTGAGGAAAGACAAATGGGCATCTGGCCGTGCTTTTGGGCCTTGGGCTCCGCTATTCGCGAAAGACTACGAGAC
GCCCTCCAGCTGGGTGAGATCGACATCATGGAAACGATCAACGGCCGGTCCGAGCTATGGCACGTTGTTCATTGC
GGCACCGGCCCGCGGGGTCCTTGTAATGAATACGACGGCCTCAACCACGCCGTCGCCGGCGTGGCCCGAGGCCAG
TGGCACACGGTTGCGTGGGAGATTGACCGCCGCTCCGGATCGCCACGGGCAGAAGAGTCTATGAGATGGTACGTG
GATGGCCGTCTATCGTGGACCTTGCTCGAATCCCAAATTCAGGACGAAAGCGCCTGGACGGCGCTCGTGGGCAAC
AGCCGAATCCTGCTGCTAAACGTTGCGGTTGGGGGGGGCTTTCCCAATGGAGTGTCGGGTATAAAGACGCCTACG
AACATGACGCTGGGCGGCGACGGAGCAAGCATGGAAGTTGATTATGTCGCGGTGTTTGCAAGCGAAGCGGATGGG
GGTGGGAGTCATGTAATATGGAATTAG
Transcript >Hirsu2|2426
ATGGCTTGGCTGCGCCTTTCGGTGTCCGTCCTTGCTCTGACACGGCTCACAGATGCCAACCAAGGCCAAGACATC
GCCCCCTCTTCTGACGAGCCCCAAGACAGGCTGGTGAAAGTAGCTCTGCCTGAAGGATTCAGCCATCGTCTATTC
TACGACGACTTCTCCTCGGAGGAACCAGGCTCGCTTCCTTCCCGCCAACGATGGAAGTTGGACCTCGGCATAGCG
TACCCCGACGGCCCGGAGCATTGGGGCACGGGTGAGGTACAAATCTACACGGATAACCGATCCAACATCGCCATA
ACGAACGAGGGTACACTCAAGATCACCCCTATTCGTCTTGACAACGGGACATGGACTTCCGCGCGCATCGAGACG
ACGCCGGAAGGGGACTTTGCCTGTCAGGCTGGTCAACGAGTGCGCGTCCAGGCCCGAATCAAGCTCGGCGATGAC
CCTGAGGAAAGACAAATGGGCATCTGGCCGTGCTTTTGGGCCTTGGGCTCCGCTATTCGCGAAAGACTACGAGAC
GCCCTCCAGCTGGGTGAGATCGACATCATGGAAACGATCAACGGCCGGTCCGAGCTATGGCACGTTGTTCATTGC
GGCACCGGCCCGCGGGGTCCTTGTAATGAATACGACGGCCTCAACCACGCCGTCGCCGGCGTGGCCCGAGGCCAG
TGGCACACGGTTGCGTGGGAGATTGACCGCCGCTCCGGATCGCCACGGGCAGAAGAGTCTATGAGATGGTACGTG
GATGGCCGTCTATCGTGGACCTTGCTCGAATCCCAAATTCAGGACGAAAGCGCCTGGACGGCGCTCGTGGGCAAC
AGCCGAATCCTGCTGCTAAACGTTGCGGTTGGGGGGGGCTTTCCCAATGGAGTGTCGGGTATAAAGACGCCTACG
AACATGACGCTGGGCGGCGACGGAGCAAGCATGGAAGTTGATTATGTCGCGGTGTTTGCAAGCGAAGCGGATGGG
GGTGGGAGTCATGTAATATGGAATTAG
Gene >Hirsu2|2426
ATGGCTTGGCTGCGCCTTTCGGTGTCCGTCCTTGCTCTGACACGGCTCACAGATGCCAACCAAGGCCAAGACATC
GCCCCCTCTTCTGACGAGCCCCAAGACAGGCTGGTGAAAGTAGCTCTGCCTGAAGGATTCAGCCATCGTCTATTC
TACGACGACTTCTCCTCGGAGGAACCAGGCTCGCTTCCTTCCCGCCAACGATGGAAGTTGGACCTCGGCATAGCG
TACCCCGACGGCCCGGAGCATTGGGGCACGGGTGAGGTACAAATCTACACGGATAACCGATCCAACATCGCCATA
ACGAACGAGGGTACACTCAAGATCACCCCTATTCGTCTTGACAACGGGACATGGACTTCCGCGCGCATCGAGACG
ACGCCGGAAGGGGACTTTGCCTGTCAGGCTGGTCAACGAGTGCGCGTCCAGGCCCGAATCAAGCTCGGCGATGAC
CCTGAGGAAAGACAAATGGGCATCTGGCCGTGCTTTTGGGCCTTGGGCTCCGCTATTCGCGAAAGACTACGAGAC
GCCCTCCAGCTGGGTGAGATCGACATCATGGAAACGATCAACGGCCGGTCCGAGCTATGGCACGTTGTTCATTGC
GGCACCGGCCCGCGGGGTCCTTGTAATGAATACGACGGCCTCAACCACGCCGTCGCCGGCGTGGCCCGAGGCCAG
TGGCACACGGTTGCGTGGGAGATTGACCGCCGCTCCGGATCGCCACGGGCAGAAGAGTCTATGAGATGGTACGTG
GATGGCCGTCTATCGTGGACCTTGCTCGAATCCCAAATTCAGGACGAAAGCGCCTGGACGGCGCTCGTGGGCAAC
AGCCGAATCCTGCTGCTAAACGTTGCGGTTGGGGGGGGCTTTCCCAATGGAGTGTCGGGTATAAAGACGCCTACG
AACATGACGCTGGGCGGCGACGGAGCAAGCATGGAAGTTGATTATGTCGCGGTGTTTGCAAGCGAAGCGGATGGG
GGTGGGAGTCATGTAATATGGAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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