Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2417
Gene name
LocationContig_1578:1851..3652
Strand+
Gene length (bp)1801
Transcript length (bp)1623
Coding sequence length (bp)1623
Protein length (aa) 541

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00928 Adap_comp_sub Adaptor complexes medium subunit family 3.3E-68 179 540

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y2T2|AP3M1_HUMAN AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1 53 539 7.0E-40
sp|Q5R478|AP3M1_PONAB AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1 53 539 7.0E-40
sp|P53676|AP3M1_RAT AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=1 SV=1 53 539 2.0E-39
sp|Q9JKC8|AP3M1_MOUSE AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1 53 539 2.0E-39
sp|Q24K11|AP3M1_BOVIN AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1 53 539 4.0E-39
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y2T2|AP3M1_HUMAN AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1 53 539 7.0E-40
sp|Q5R478|AP3M1_PONAB AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1 53 539 7.0E-40
sp|P53676|AP3M1_RAT AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=1 SV=1 53 539 2.0E-39
sp|Q9JKC8|AP3M1_MOUSE AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1 53 539 2.0E-39
sp|Q24K11|AP3M1_BOVIN AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1 53 539 4.0E-39
sp|Q5ZMP7|AP3M1_CHICK AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1 53 539 4.0E-38
sp|P53678|AP3M2_RAT AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1 54 539 3.0E-36
sp|P53677|AP3M2_HUMAN AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=2 SV=1 54 539 7.0E-36
sp|O94669|AP3M_SCHPO AP-3 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm3 PE=3 SV=1 3 412 2.0E-35
sp|Q8R2R9|AP3M2_MOUSE AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=1 SV=1 54 539 2.0E-35
sp|F4I562|AP3M_ARATH AP-3 complex subunit mu OS=Arabidopsis thaliana GN=AP3M PE=1 SV=1 4 289 1.0E-34
sp|P47795|AP1M_DIPOM AP-1 complex subunit mu OS=Diplobatis ommata PE=2 SV=1 69 404 2.0E-32
sp|Q9GPF1|AP3M_DICDI AP-3 complex subunit mu OS=Dictyostelium discoideum GN=apm3 PE=2 SV=1 53 286 3.0E-31
sp|Q54HS9|AP1M_DICDI AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1 7 287 4.0E-26
sp|P84092|AP2M1_RAT AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1 8 291 7.0E-25
sp|P84091|AP2M1_MOUSE AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1 8 291 7.0E-25
sp|Q4R706|AP2M1_MACFA AP-2 complex subunit mu OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1 8 291 7.0E-25
sp|Q96CW1|AP2M1_HUMAN AP-2 complex subunit mu OS=Homo sapiens GN=AP2M1 PE=1 SV=2 8 291 7.0E-25
sp|Q3ZC13|AP2M1_BOVIN AP-2 complex subunit mu OS=Bos taurus GN=AP2M1 PE=2 SV=1 8 291 7.0E-25
sp|Q5ZMP6|AP2M1_CHICK AP-2 complex subunit mu OS=Gallus gallus GN=AP2M1 PE=2 SV=1 8 291 2.0E-24
sp|Q7ZW98|AP2MB_DANRE AP-2 complex subunit mu-B OS=Danio rerio GN=ap2m1b PE=2 SV=1 8 291 4.0E-24
sp|Q5NVF7|AP2M1_PONAB AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1 8 291 4.0E-24
sp|Q750L8|AP3M_ASHGO AP-3 complex subunit mu OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APM3 PE=3 SV=2 77 385 4.0E-24
sp|Q09718|AP2M_SCHPO AP-2 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm4 PE=1 SV=1 64 405 5.0E-24
sp|Q6P856|AP2M1_XENTR AP-2 complex subunit mu OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1 8 291 7.0E-24
sp|Q6NWK2|AP2MA_DANRE AP-2 complex subunit mu-A OS=Danio rerio GN=ap2m1a PE=2 SV=1 8 291 1.0E-23
sp|Q801Q8|AP2M1_XENLA AP-2 complex subunit mu OS=Xenopus laevis GN=ap2m1 PE=2 SV=1 8 291 2.0E-23
sp|P35602|AP1M_CAEEL AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2 7 286 3.0E-22
sp|Q9BXS5|AP1M1_HUMAN AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3 62 287 5.0E-22
sp|Q2KJ81|AP1M1_BOVIN AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3 62 287 5.0E-22
sp|P35585|AP1M1_MOUSE AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3 62 287 8.0E-22
sp|Q32Q06|AP1M1_RAT AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3 62 287 8.0E-22
sp|P35603|AP2M_CAEEL AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2 SV=2 57 327 1.0E-20
sp|Q9Y6Q5|AP1M2_HUMAN AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4 62 286 7.0E-20
sp|Q00776|AP1M1_YEAST AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM1 PE=1 SV=2 7 286 1.0E-19
sp|Q3SYW1|AP1M2_BOVIN AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3 62 286 1.0E-19
sp|Q9WVP1|AP1M2_MOUSE AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3 62 286 2.0E-19
sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2 OS=Arabidopsis thaliana GN=AP1M2 PE=1 SV=1 62 286 7.0E-19
sp|Q9SAC9|AP1M1_ARATH AP-1 complex subunit mu-1 OS=Arabidopsis thaliana GN=AP1M1 PE=3 SV=1 62 286 2.0E-18
sp|Q9HFE5|AP1M1_SCHPO AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apm1 PE=1 SV=1 62 286 8.0E-18
sp|Q29RY8|AP4M1_BOVIN AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1 62 329 1.0E-17
sp|Q2PWT8|AP4M1_RAT AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1 62 329 4.0E-17
sp|P54672|AP2M_DICDI AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2 66 285 3.0E-16
sp|P38153|AP3M_YEAST AP-3 complex subunit mu OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM3 PE=1 SV=2 37 329 3.0E-16
sp|O23140|AP2M_ARATH AP-2 complex subunit mu OS=Arabidopsis thaliana GN=AP2M PE=1 SV=1 65 404 6.0E-16
sp|Q9JKC7|AP4M1_MOUSE AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1 62 329 8.0E-16
sp|O00189|AP4M1_HUMAN AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2 62 329 2.0E-15
sp|Q9SB50|AP4M_ARATH AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1 60 286 1.0E-13
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Golgi apparatus Nuclear localization signal 0.3453 0.3665 0.0266 0.0817 0.0439 0.0195 0.4024 0.4205 0.8228 0.0019

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5006
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1790
Ophiocordyceps australis map64 (Brazil) OphauB2|4969
Ophiocordyceps camponoti-floridani Ophcf2|02116
Ophiocordyceps camponoti-rufipedis Ophun1|6515
Ophiocordyceps kimflemingae Ophio5|8532
Ophiocordyceps subramaniannii Hirsu2|2417 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2417
MNGVLEALHIFDDSRSALLSHTYTGRPLSAAHLLSLYLDHPAPRPNLVYLPNTSPPTLVFSLAHANLLLLATSST
EIEPLLVLEFLHRVVDALEDFLGAPLLAVKIENNYDVVAQLLTEMCDAGIICTTEPNALREVVEIEGWMGKLLGS
INLPGKSPLGTSFSNASAPSLAAATAPALPWRRANVRHTSNELYADVVETLSVTLAPSGRPLAAFANGTIAFTAK
VSGVPDITVNLTSPSGKHNIGGVMELPVFHPCVRLNRWKERPGELSFVPPDGRFTLAGYEVDLLPFTGGKGGSLS
THNLKLPVSLEMKTGVGPTGSDFEVRVQVNKLVGTPGSSVSQLGRGGGSGRLGAPHPGSPGAPLLDDLKITIPLP
EDVRNLSDIRPGKGDASFNPGERILEWHVPSKELTGPTSHVGLRCTVVGPLTDDEEHGFDPSGFGFGNDYPYGEP
YQSGSPVAKTGHDKHDDGSEQDAKKAAQNKILMPSSASVSFSVKGWLASGLRVDSIAIDTRMSRGLGEGVKPYKG
VKYLTVSKGGVEIRC*
Coding >Hirsu2|2417
ATGAACGGCGTCCTCGAGGCCCTGCACATCTTCGACGACAGCAGGAGCGCCCTACTGTCGCACACGTACACGGGC
CGGCCGCTGTCGGCCGCCCACCTGCTGTCGCTCTACCTCGACCACCCGGCCCCGAGGCCGAACCTCGTCTACCTG
CCCAACACGAGCCCGCCCACGCTCGTCTTCAGCCTCGCCCACGCTAACCTGCTGCTCCTGGCCACCTCGTCGACC
GAGATCGAGCCGCTGCTCGTCCTCGAGTTCCTGCACCGGGTCGTCGATGCCCTCGAGGACTTCCTCGGCGCCCCG
CTCCTGGCCGTCAAGATCGAGAACAACTACGATGTCGTCGCCCAGCTGCTCACCGAGATGTGCGACGCCGGCATA
ATCTGCACCACCGAGCCCAATGCGCTGAGGGAGGTTGTCGAGATCGAGGGCTGGATGGGCAAGCTGCTGGGAAGC
ATCAACCTGCCGGGAAAATCCCCGCTCGGAACCAGCTTCTCCAACGCGAGCGCGCCCTCGCTGGCAGCTGCCACG
GCGCCGGCGCTGCCCTGGAGGCGGGCCAACGTGCGGCACACGTCCAACGAGTTGTACGCCGATGTCGTCGAGACG
CTGTCCGTCACCCTCGCACCCTCGGGCAGGCCGCTCGCCGCCTTCGCCAACGGCACCATCGCCTTCACGGCCAAG
GTGTCAGGCGTGCCCGACATCACCGTCAACTTGACGAGTCCCTCCGGGAAGCACAACATTGGCGGCGTCATGGAG
CTGCCCGTCTTCCACCCTTGCGTACGCCTCAATCGGTGGAAGGAGCGGCCGGGCGAGCTGAGTTTTGTGCCCCCG
GACGGGCGCTTCACCCTGGCCGGATACGAGGTCGATCTGCTGCCCTTCACGGGCGGCAAGGGCGGCAGTCTGAGC
ACGCACAACCTCAAGCTGCCGGTCAGCCTGGAGATGAAGACGGGCGTCGGCCCCACGGGGTCGGACTTTGAGGTC
CGCGTCCAGGTCAACAAGCTGGTCGGCACTCCGGGCTCCTCCGTCAGCCAGCTCGGGCGGGGCGGCGGTTCCGGC
AGGCTCGGGGCGCCCCATCCCGGCTCCCCGGGCGCGCCCCTGCTCGACGACCTCAAGATCACGATTCCGCTGCCC
GAAGACGTGAGGAACCTGTCGGACATCCGGCCCGGCAAGGGCGACGCGAGCTTCAACCCGGGGGAGAGGATACTG
GAGTGGCACGTCCCGTCGAAGGAGTTGACAGGCCCGACCAGCCACGTCGGGCTCCGGTGCACCGTGGTCGGGCCG
CTGACGGACGACGAGGAGCACGGGTTCGACCCGAGCGGCTTCGGCTTCGGCAACGACTATCCCTACGGCGAGCCG
TACCAGTCCGGCTCGCCGGTGGCCAAGACTGGGCACGACAAGCACGACGACGGCAGCGAGCAGGACGCGAAGAAG
GCGGCTCAAAACAAGATCCTGATGCCCAGCTCGGCATCGGTGAGCTTCTCCGTCAAGGGCTGGCTGGCGAGCGGG
CTCAGGGTGGACAGCATCGCGATAGACACGAGGATGAGCCGGGGCCTGGGGGAGGGCGTGAAGCCTTACAAGGGC
GTCAAGTATCTGACCGTCAGCAAGGGCGGCGTTGAGATTCGCTGCTAG
Transcript >Hirsu2|2417
ATGAACGGCGTCCTCGAGGCCCTGCACATCTTCGACGACAGCAGGAGCGCCCTACTGTCGCACACGTACACGGGC
CGGCCGCTGTCGGCCGCCCACCTGCTGTCGCTCTACCTCGACCACCCGGCCCCGAGGCCGAACCTCGTCTACCTG
CCCAACACGAGCCCGCCCACGCTCGTCTTCAGCCTCGCCCACGCTAACCTGCTGCTCCTGGCCACCTCGTCGACC
GAGATCGAGCCGCTGCTCGTCCTCGAGTTCCTGCACCGGGTCGTCGATGCCCTCGAGGACTTCCTCGGCGCCCCG
CTCCTGGCCGTCAAGATCGAGAACAACTACGATGTCGTCGCCCAGCTGCTCACCGAGATGTGCGACGCCGGCATA
ATCTGCACCACCGAGCCCAATGCGCTGAGGGAGGTTGTCGAGATCGAGGGCTGGATGGGCAAGCTGCTGGGAAGC
ATCAACCTGCCGGGAAAATCCCCGCTCGGAACCAGCTTCTCCAACGCGAGCGCGCCCTCGCTGGCAGCTGCCACG
GCGCCGGCGCTGCCCTGGAGGCGGGCCAACGTGCGGCACACGTCCAACGAGTTGTACGCCGATGTCGTCGAGACG
CTGTCCGTCACCCTCGCACCCTCGGGCAGGCCGCTCGCCGCCTTCGCCAACGGCACCATCGCCTTCACGGCCAAG
GTGTCAGGCGTGCCCGACATCACCGTCAACTTGACGAGTCCCTCCGGGAAGCACAACATTGGCGGCGTCATGGAG
CTGCCCGTCTTCCACCCTTGCGTACGCCTCAATCGGTGGAAGGAGCGGCCGGGCGAGCTGAGTTTTGTGCCCCCG
GACGGGCGCTTCACCCTGGCCGGATACGAGGTCGATCTGCTGCCCTTCACGGGCGGCAAGGGCGGCAGTCTGAGC
ACGCACAACCTCAAGCTGCCGGTCAGCCTGGAGATGAAGACGGGCGTCGGCCCCACGGGGTCGGACTTTGAGGTC
CGCGTCCAGGTCAACAAGCTGGTCGGCACTCCGGGCTCCTCCGTCAGCCAGCTCGGGCGGGGCGGCGGTTCCGGC
AGGCTCGGGGCGCCCCATCCCGGCTCCCCGGGCGCGCCCCTGCTCGACGACCTCAAGATCACGATTCCGCTGCCC
GAAGACGTGAGGAACCTGTCGGACATCCGGCCCGGCAAGGGCGACGCGAGCTTCAACCCGGGGGAGAGGATACTG
GAGTGGCACGTCCCGTCGAAGGAGTTGACAGGCCCGACCAGCCACGTCGGGCTCCGGTGCACCGTGGTCGGGCCG
CTGACGGACGACGAGGAGCACGGGTTCGACCCGAGCGGCTTCGGCTTCGGCAACGACTATCCCTACGGCGAGCCG
TACCAGTCCGGCTCGCCGGTGGCCAAGACTGGGCACGACAAGCACGACGACGGCAGCGAGCAGGACGCGAAGAAG
GCGGCTCAAAACAAGATCCTGATGCCCAGCTCGGCATCGGTGAGCTTCTCCGTCAAGGGCTGGCTGGCGAGCGGG
CTCAGGGTGGACAGCATCGCGATAGACACGAGGATGAGCCGGGGCCTGGGGGAGGGCGTGAAGCCTTACAAGGGC
GTCAAGTATCTGACCGTCAGCAAGGGCGGCGTTGAGATTCGCTGCTAG
Gene >Hirsu2|2417
ATGAACGGCGTCCTCGAGGCCCTGCACATCTTCGACGACAGCAGGTCCTTCTTCCACGACCTCGGAACCCGTGAC
AGAGAGCCGGCTTGACTGACCGCCCGCCCGCCCGCAGGAGCGCCCTACTGTCGCACACGTACACGGGCCGGCCGC
TGTCGGCCGCCCACCTGCTGTCGCTCTACCTCGACCACCCGGCCCCGAGGCCGAACCTCGTCTACCTGCCCAACA
CGAGCCCGCCCACGCTCGTCTTCAGCCTCGCCCACGCTAACCTGCTGCTCCTGGCCACCTCGTCGACCGAGATCG
AGCCGCTGCTCGTCCTCGAGTTCCTGCACCGGGTCGTCGATGCCCTCGAGGACTTCCTCGGCGCCCCGCTCCTGG
CCGTCAAGATCGAGAACAACTACGATGTCGTCGCCCAGCTGCTCACCGAGATGTGCGACGCCGGCATAATCTGCA
CCACCGAGCCCAATGCGCTGAGGGAGGTTGTCGAGATCGAGGGCTGGATGGGCAAGCTGCTGGGAAGCATCAACC
TGCCGGGGTGAGCCATGTTCTCCCCTCCCCCCCTCCTCCCTCCCCTGCCTCTCGTCGCCAGGGCCTCGTGCTGCG
CGCTCCCCTCCCTTCTCCGGGTCGCTGACGCGCGCGCAACAGAAAATCCCCGCTCGGAACCAGCTTCTCCAACGC
GAGCGCGCCCTCGCTGGCAGCTGCCACGGCGCCGGCGCTGCCCTGGAGGCGGGCCAACGTGCGGCACACGTCCAA
CGAGTTGTACGCCGATGTCGTCGAGACGCTGTCCGTCACCCTCGCACCCTCGGGCAGGCCGCTCGCCGCCTTCGC
CAACGGCACCATCGCCTTCACGGCCAAGGTGTCAGGCGTGCCCGACATCACCGTCAACTTGACGAGTCCCTCCGG
GAAGCACAACATTGGCGGCGTCATGGAGCTGCCCGTCTTCCACCCTTGCGTACGCCTCAATCGGTGGAAGGAGCG
GCCGGGCGAGCTGAGTTTTGTGCCCCCGGACGGGCGCTTCACCCTGGCCGGATACGAGGTCGATCTGCTGCCCTT
CACGGGCGGCAAGGGCGGCAGTCTGAGCACGCACAACCTCAAGCTGCCGGTCAGCCTGGAGATGAAGACGGGCGT
CGGCCCCACGGGGTCGGACTTTGAGGTCCGCGTCCAGGTCAACAAGCTGGTCGGCACTCCGGGCTCCTCCGTCAG
CCAGCTCGGGCGGGGCGGCGGTTCCGGCAGGCTCGGGGCGCCCCATCCCGGCTCCCCGGGCGCGCCCCTGCTCGA
CGACCTCAAGATCACGATTCCGCTGCCCGAAGACGTGAGGAACCTGTCGGACATCCGGCCCGGCAAGGGCGACGC
GAGCTTCAACCCGGGGGAGAGGATACTGGAGTGGCACGTCCCGTCGAAGGAGTTGACAGGCCCGACCAGCCACGT
CGGGCTCCGGTGCACCGTGGTCGGGCCGCTGACGGACGACGAGGAGCACGGGTTCGACCCGAGCGGCTTCGGCTT
CGGCAACGACTATCCCTACGGCGAGCCGTACCAGTCCGGCTCGCCGGTGGCCAAGACTGGGCACGACAAGCACGA
CGACGGCAGCGAGCAGGACGCGAAGAAGGCGGCTCAAAACAAGATCCTGATGCCCAGCTCGGCATCGGTGAGCTT
CTCCGTCAAGGGCTGGCTGGCGAGCGGGCTCAGGGTGGACAGCATCGCGATAGACACGAGGATGAGCCGGGGCCT
GGGGGAGGGCGTGAAGCCTTACAAGGGCGTCAAGTATCTGACCGTCAGCAAGGGCGGCGTTGAGATTCGCTGCTA
G

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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