Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2416
Gene name
LocationContig_1578:1145..1520
Strand-
Gene length (bp)375
Transcript length (bp)291
Coding sequence length (bp)291
Protein length (aa) 97

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Transmembrane domain|Mitochondrial transit peptide 0.0547 0.1817 0.055 0.0526 0.9245 0.4139 0.2937 0.2564 0.1385 0.1297

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 73 95 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5005
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1791
Ophiocordyceps australis map64 (Brazil) OphauB2|4968
Ophiocordyceps camponoti-floridani Ophcf2|02115
Ophiocordyceps kimflemingae Ophio5|8533
Ophiocordyceps subramaniannii Hirsu2|2416 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2416
MGGDKVPSLYSLEKPEDLKELMRKDRGDDCLSCKIVGSGAFFGLAAYGYFSGMSQLEKQRAAILKSRSVFGIWSR
QLGVTGISLGLVWMGLWRAFR*
Coding >Hirsu2|2416
ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC
CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTACGGCTACTTC
TCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATCTGGAGCCGC
CAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA
Transcript >Hirsu2|2416
ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC
CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTACGGCTACTTC
TCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATCTGGAGCCGC
CAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA
Gene >Hirsu2|2416
ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC
CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAAGTTTGCGCCAGCTCGCGAGCTCACCACCTACCCTAGA
CCCCGAGACCTCGCAAGCTGACCGCGCCCCGGCGTGCTTTCAGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTAC
GGCTACTTCTCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATC
TGGAGCCGCCAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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