Protein ID | Hirsu2|2416 |
Gene name | |
Location | Contig_1578:1145..1520 |
Strand | - |
Gene length (bp) | 375 |
Transcript length (bp) | 291 |
Coding sequence length (bp) | 291 |
Protein length (aa) | 97 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Transmembrane domain|Mitochondrial transit peptide | 0.0547 | 0.1817 | 0.055 | 0.0526 | 0.9245 | 0.4139 | 0.2937 | 0.2564 | 0.1385 | 0.1297 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 31 | 53 | 22 |
2 | 73 | 95 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 5005 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2416 MGGDKVPSLYSLEKPEDLKELMRKDRGDDCLSCKIVGSGAFFGLAAYGYFSGMSQLEKQRAAILKSRSVFGIWSR QLGVTGISLGLVWMGLWRAFR* |
Coding | >Hirsu2|2416 ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTACGGCTACTTC TCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATCTGGAGCCGC CAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA |
Transcript | >Hirsu2|2416 ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTACGGCTACTTC TCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATCTGGAGCCGC CAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA |
Gene | >Hirsu2|2416 ATGGGCGGCGACAAGGTCCCGAGCCTGTACTCGCTCGAGAAGCCCGAGGACCTGAAGGAGCTGATGCGCAAGGAC CGAGGCGACGACTGCCTGAGCTGCAAGATTGTTGGCAAGTTTGCGCCAGCTCGCGAGCTCACCACCTACCCTAGA CCCCGAGACCTCGCAAGCTGACCGCGCCCCGGCGTGCTTTCAGGCAGCGGCGCCTTTTTCGGGCTGGCCGCGTAC GGCTACTTCTCGGGCATGTCACAGCTCGAGAAGCAGCGGGCTGCTATCCTGAAGAGCAGGTCCGTGTTCGGCATC TGGAGCCGCCAGCTCGGCGTCACGGGCATCTCGCTCGGCCTCGTCTGGATGGGACTGTGGCGGGCGTTCCGATGA |