© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2415 |
| Gene name | |
| Location | Contig_1577:4958..5737 |
| Strand | + |
| Gene length (bp) | 779 |
| Transcript length (bp) | 717 |
| Coding sequence length (bp) | 717 |
| Protein length (aa) | 239 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.581 | 0.3676 | 0.3695 | 0.1454 | 0.2363 | 0.0569 | 0.148 | 0.2251 | 0.3021 | 0.0128 |
| Orthofinder run ID | 4 |
| Orthogroup | 5004 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2415 MASPSAHAMPEHWTELIAAKQQKQLCWEELRALQSACEKTCGKTQVAECDDCYGKALNRMRQRYTASREREWFTQ RKAFLHELEELFQEAMERKRSLEFVEARIESEKEAWYRWVLRKYPEFIAVSEGEARQEELRGMLDDPDRSRQELV GMMLEGVGAPAGWPSSVAAFAERVVAARGDAAELKRLYVAEFFLGRPPRGEVMENAQKYLDEYRASASLTLEDPP ATAGRAPAGQDGL* |
| Coding | >Hirsu2|2415 ATGGCGTCGCCGTCGGCGCACGCGATGCCGGAGCACTGGACGGAGCTGATCGCGGCCAAGCAACAGAAGCAGCTG TGCTGGGAGGAGCTGCGGGCGCTGCAGAGCGCGTGCGAGAAGACGTGCGGCAAAACGCAGGTGGCGGAGTGCGAC GACTGCTACGGCAAGGCACTGAACCGGATGCGGCAGCGATACACGGCGAGCCGGGAACGGGAGTGGTTCACGCAG CGCAAGGCCTTCCTGCACGAGCTGGAGGAGCTCTTCCAGGAGGCCATGGAGCGCAAGCGGAGCCTCGAGTTCGTC GAGGCGCGGATCGAGTCGGAGAAGGAGGCCTGGTACCGCTGGGTGCTGCGCAAGTACCCCGAGTTCATCGCGGTG TCGGAGGGCGAGGCGCGGCAGGAGGAGCTGCGCGGCATGCTGGACGACCCGGACCGATCGCGGCAGGAGCTGGTG GGCATGATGCTCGAGGGCGTGGGCGCGCCGGCGGGCTGGCCGTCGAGCGTGGCGGCCTTTGCCGAGCGGGTGGTG GCGGCGCGGGGCGACGCGGCCGAGCTGAAGCGCCTCTACGTGGCCGAGTTCTTCCTGGGGCGCCCGCCGCGGGGC GAGGTGATGGAGAACGCGCAGAAGTACCTGGACGAGTACCGGGCCAGCGCGTCGCTGACGCTCGAGGACCCACCA GCGACGGCTGGACGAGCTCCGGCGGGCCAAGACGGCCTTTGA |
| Transcript | >Hirsu2|2415 ATGGCGTCGCCGTCGGCGCACGCGATGCCGGAGCACTGGACGGAGCTGATCGCGGCCAAGCAACAGAAGCAGCTG TGCTGGGAGGAGCTGCGGGCGCTGCAGAGCGCGTGCGAGAAGACGTGCGGCAAAACGCAGGTGGCGGAGTGCGAC GACTGCTACGGCAAGGCACTGAACCGGATGCGGCAGCGATACACGGCGAGCCGGGAACGGGAGTGGTTCACGCAG CGCAAGGCCTTCCTGCACGAGCTGGAGGAGCTCTTCCAGGAGGCCATGGAGCGCAAGCGGAGCCTCGAGTTCGTC GAGGCGCGGATCGAGTCGGAGAAGGAGGCCTGGTACCGCTGGGTGCTGCGCAAGTACCCCGAGTTCATCGCGGTG TCGGAGGGCGAGGCGCGGCAGGAGGAGCTGCGCGGCATGCTGGACGACCCGGACCGATCGCGGCAGGAGCTGGTG GGCATGATGCTCGAGGGCGTGGGCGCGCCGGCGGGCTGGCCGTCGAGCGTGGCGGCCTTTGCCGAGCGGGTGGTG GCGGCGCGGGGCGACGCGGCCGAGCTGAAGCGCCTCTACGTGGCCGAGTTCTTCCTGGGGCGCCCGCCGCGGGGC GAGGTGATGGAGAACGCGCAGAAGTACCTGGACGAGTACCGGGCCAGCGCGTCGCTGACGCTCGAGGACCCACCA GCGACGGCTGGACGAGCTCCGGCGGGCCAAGACGGCCTTTGA |
| Gene | >Hirsu2|2415 ATGGCGTCGCCGTCGGCGCACGCGATGCCGGAGCACTGGACGGAGCTGATCGCGGCCAAGCAACAGAAGCAGCTG TGCTGGGAGGAGCTGCGGGCGCTGCAGAGCGCGTGCGAGAAGACGTGCGGCAAAACGCAGGTGGCGGAGTGCGAC GACTGCTACGGCAAGGCACTGAACCGGATGCGGCAGCGATACACGGCGAGCCGGGAACGGGAGTGGTTCACGCAG CGCAAGGCCTTCCTGCACGAGCTGGAGGAGCTCTTCCAGGAGGCCATGGAGCGCAAGCGGAGCCTCGAGTTCGTC GAGGCGCGGATCGAGTCGGAGAAGGAGGCCTGGTACCGCTGGGTGCTGCGCAAGTACCCCGAGTTCATCGCGGTG TCGGAGGGCGAGGCGCGGCAGGAGGAGCTGCGCGGCATGCTGGACGACCCGGACCGATCGCGGCAGGAGCTGGTG GGCATGATGCTCGAGGGCGTGGGCGCGCCGGCGGGCTGGCCGTCGAGCGTGGCGGCCTTTGCCGAGCGGGTGGTG GCGGCGCGGGGCGACGCGGCCGAGCTGAAGCGCCTCTACGTGGCCGAGTTCTTCCTGGGGCGCCCGCCGCGGGGC GAGGTGATGGAGAACGCGCAGAAGTACCTGGACGAGTACCGGGCCAGCGCGTCGCTGACGCTCGAGGACGTCATC GACCACATCGCCTCGGACACCAAGGAGAGCCGGCACTCGCAGCCGCAGCGGGAGAGCCACCAGCGACGGCTGGAC GAGCTCCGGCGGGCCAAGACGGCCTTTGA |