Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2413
Gene name
LocationContig_1577:2483..3588
Strand+
Gene length (bp)1105
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01454 MAGE MAGE homology domain 4.0E-64 61 256

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7U4|NSE3_SCHPO Non-structural maintenance of chromosome element 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse3 PE=1 SV=1 51 279 5.0E-11

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2002 0.9327 0.3186 0.0168 0.1527 0.0021 0.0107 0.0125 0.0073 0.0045

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2082
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4007
Ophiocordyceps australis map64 (Brazil) OphauB2|7399
Ophiocordyceps camponoti-floridani Ophcf2|06212
Ophiocordyceps camponoti-rufipedis Ophun1|7614
Ophiocordyceps kimflemingae Ophio5|7120
Ophiocordyceps subramaniannii Hirsu2|2413 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2413
MPPSQRRRRPADEEESEEDARPRQRPNRMDSDDEAGESSGDGMDVDSPAGDDVDRQLAKKLVRYAISCEYSRTPI
RRDGIKERVLGNRGRSFKKVYQLAQQQLREVWGMELRELPIREKMSLQEKRQAMKSSSQVKTGSGAYILSSTLPA
RYRSASILRPSKVPSEEDEATYTAFYTLVVALIWLSAGELSEQKLKRHLMRLNADQNLSNEKTETTIRRMEKQGY
VVKKVERPPVGQDGDQTVTWHVGPRAKEEIGLDGVMGMVREVYREWTPDLDKKLRASLGLKAQQPDTRGEGAAEA
SGNGGQTDEGEDE*
Coding >Hirsu2|2413
ATGCCTCCGTCGCAGAGGAGACGGCGCCCGGCCGACGAGGAAGAATCAGAGGAGGACGCGCGCCCGCGACAACGC
CCGAATCGCATGGATTCGGACGACGAAGCCGGCGAATCATCTGGCGATGGCATGGACGTGGACAGCCCGGCAGGC
GATGATGTCGACAGACAGCTGGCGAAAAAGCTGGTTCGGTATGCCATCTCATGCGAATATTCACGAACGCCTATT
CGGAGAGACGGGATAAAGGAGAGAGTCCTCGGCAACCGAGGTCGCTCTTTCAAGAAGGTGTATCAACTGGCGCAG
CAACAATTACGAGAGGTTTGGGGCATGGAGCTGCGGGAACTGCCCATTCGAGAAAAGATGTCTCTGCAGGAGAAG
CGGCAAGCCATGAAGTCGAGCTCCCAGGTGAAGACGGGATCCGGGGCGTACATCCTCAGCTCGACACTGCCGGCA
CGATACCGGAGCGCGTCGATACTGCGGCCGTCCAAGGTGCCGAGCGAGGAGGACGAGGCTACGTACACGGCGTTT
TACACGCTGGTCGTCGCGCTGATCTGGCTGAGCGCCGGCGAGCTCAGCGAGCAGAAGCTCAAGCGCCATCTCATG
CGGCTGAACGCCGATCAAAACTTGTCCAACGAGAAGACCGAGACGACGATCCGGAGAATGGAGAAGCAGGGGTAC
GTGGTGAAGAAGGTGGAGCGTCCACCGGTAGGCCAGGACGGGGACCAAACAGTCACCTGGCACGTCGGGCCGCGG
GCCAAGGAGGAGATCGGACTCGACGGCGTCATGGGCATGGTGCGTGAGGTCTACAGAGAATGGACTCCCGACCTG
GACAAGAAGCTTCGTGCCAGCTTGGGGCTCAAGGCGCAGCAGCCCGATACGAGGGGGGAGGGCGCGGCAGAGGCC
AGCGGGAACGGGGGACAGACGGACGAGGGCGAAGACGAATAA
Transcript >Hirsu2|2413
ATGCCTCCGTCGCAGAGGAGACGGCGCCCGGCCGACGAGGAAGAATCAGAGGAGGACGCGCGCCCGCGACAACGC
CCGAATCGCATGGATTCGGACGACGAAGCCGGCGAATCATCTGGCGATGGCATGGACGTGGACAGCCCGGCAGGC
GATGATGTCGACAGACAGCTGGCGAAAAAGCTGGTTCGGTATGCCATCTCATGCGAATATTCACGAACGCCTATT
CGGAGAGACGGGATAAAGGAGAGAGTCCTCGGCAACCGAGGTCGCTCTTTCAAGAAGGTGTATCAACTGGCGCAG
CAACAATTACGAGAGGTTTGGGGCATGGAGCTGCGGGAACTGCCCATTCGAGAAAAGATGTCTCTGCAGGAGAAG
CGGCAAGCCATGAAGTCGAGCTCCCAGGTGAAGACGGGATCCGGGGCGTACATCCTCAGCTCGACACTGCCGGCA
CGATACCGGAGCGCGTCGATACTGCGGCCGTCCAAGGTGCCGAGCGAGGAGGACGAGGCTACGTACACGGCGTTT
TACACGCTGGTCGTCGCGCTGATCTGGCTGAGCGCCGGCGAGCTCAGCGAGCAGAAGCTCAAGCGCCATCTCATG
CGGCTGAACGCCGATCAAAACTTGTCCAACGAGAAGACCGAGACGACGATCCGGAGAATGGAGAAGCAGGGGTAC
GTGGTGAAGAAGGTGGAGCGTCCACCGGTAGGCCAGGACGGGGACCAAACAGTCACCTGGCACGTCGGGCCGCGG
GCCAAGGAGGAGATCGGACTCGACGGCGTCATGGGCATGGTGCGTGAGGTCTACAGAGAATGGACTCCCGACCTG
GACAAGAAGCTTCGTGCCAGCTTGGGGCTCAAGGCGCAGCAGCCCGATACGAGGGGGGAGGGCGCGGCAGAGGCC
AGCGGGAACGGGGGACAGACGGACGAGGGCGAAGACGAATAA
Gene >Hirsu2|2413
ATGCCTCCGTCGCAGAGGAGACGGCGCCCGGTTCGTCAAGCTGTCTATCGGCGGACGTTCCGAGTTGACTAAGTG
AGCAGGCAGGCCGACGAGGAAGAATCAGAGGAGGACGCGCGCCCGCGACAACGCCCGAATCGCATGGATTCGGAC
GACGAAGCCGGCGAATCATCTGGCGATGGCATGGACGTGGACAGCCCGGCAGGCGATGATGTCGACAGACAGCTG
GCGAAAAAGCTGGTTCGGTATGCCATCTCATGCGAATATTCACGAACGCCTATTCGGAGAGACGGGATAAAGGAG
AGAGGTACGGCCCCGAGCACCAACGACATTTGTTTTGGGCATGTCGCTGATACGCCCGTCCAGTCCTCGGCAACC
GAGGTCGCTCTTTCAAGAAGGTGTATCAACTGGCGCAGCAACAATTACGAGAGGTTTGGGGCATGGAGCTGCGGG
AACTGCCCATTCGAGAAAAGATGTCTCTGCAGGAGAAGCGGCAAGGTAGGACGGGGCACGGCGCCGGTTGAAGCC
GAGGCTAAATCGCAACGCAGCCATGAAGTCGAGCTCCCAGGTGAAGACGGGATCCGGGGCGTACATCCTCAGCTC
GACACTGCCGGCACGATACCGGAGCGCGTCGATACTGCGGCCGTCCAAGGTGCCGAGCGAGGAGGACGAGGCTAC
GTACACGGCGTTTTACACGCTGGTCGTCGCGCTGATCTGGCTGAGCGCCGGCGAGCTCAGCGAGCAGAAGCTCAA
GCGCCATCTCATGCGGCTGAACGCCGATCAAAACTTGTCCAACGAGAAGACCGAGACGACGATCCGGAGAATGGA
GAAGCAGGGGTACGTGGTGAAGAAGGTGGAGCGTCCACCGGTAGGCCAGGACGGGGACCAAACAGTCACCTGGCA
CGTCGGGCCGCGGGCCAAGGAGGAGATCGGACTCGACGGCGTCATGGGCATGGTGCGTGAGGTCTACAGAGAATG
GACTCCCGACCTGGACAAGAAGCTTCGTGCCAGCTTGGGGCTCAAGGCGCAGCAGCCCGATACGAGGGGGGAGGG
CGCGGCAGAGGCCAGCGGGAACGGGGGACAGACGGACGAGGGCGAAGACGAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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