© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|2411 |
| Gene name | |
| Location | Contig_1576:4887..5480 |
| Strand | - |
| Gene length (bp) | 593 |
| Transcript length (bp) | 549 |
| Coding sequence length (bp) | 549 |
| Protein length (aa) | 183 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5733 | 0.6069 | 0.2839 | 0.0641 | 0.1946 | 0.0482 | 0.1397 | 0.1876 | 0.1376 | 0.2816 |
| Orthofinder run ID | 4 |
| Orthogroup | 9058 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2411 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2411 MSVRPVRKSSYDGDRVPSEGQTHVSATDAARARILRLALHQKILAPSSPSQNEESETEGDRGSFKKAMPPSLPDP EEPPSLHTSHAIRHWSWATVYIVHTSVHPFDYILIPSYPTITSPSPASSPIPRTPGPVEPPRSGRLLRQPAELTR PLPFEPTQRRSSRLVPESSSMYASRHLVIPVP* |
| Coding | >Hirsu2|2411 ATGTCTGTACGTCCCGTCCGCAAGTCATCTTACGACGGCGACAGGGTCCCCAGTGAGGGCCAAACGCACGTGTCC GCCACAGACGCCGCCCGTGCTCGCATCCTCCGACTGGCTCTCCACCAAAAAATCCTCGCACCATCTTCACCCAGC CAGAACGAGGAGAGCGAGACGGAGGGAGACAGAGGCTCATTCAAAAAAGCAATGCCCCCCTCCCTCCCCGACCCC GAAGAGCCCCCTTCTCTCCATACCTCCCATGCCATACGCCATTGGTCTTGGGCTACCGTCTACATTGTACACACA TCCGTCCATCCATTCGATTATATACTTATACCTTCCTATCCCACCATCACCTCTCCCTCTCCTGCCTCTTCACCA ATACCCCGAACCCCTGGACCAGTCGAACCTCCTCGATCCGGCCGACTTCTCCGTCAACCAGCCGAGCTGACCCGG CCTTTGCCCTTCGAGCCCACGCAACGGAGATCGTCTCGTCTCGTGCCCGAGAGCTCGAGCATGTACGCGTCGAGG CACCTCGTCATCCCAGTTCCCTAA |
| Transcript | >Hirsu2|2411 ATGTCTGTACGTCCCGTCCGCAAGTCATCTTACGACGGCGACAGGGTCCCCAGTGAGGGCCAAACGCACGTGTCC GCCACAGACGCCGCCCGTGCTCGCATCCTCCGACTGGCTCTCCACCAAAAAATCCTCGCACCATCTTCACCCAGC CAGAACGAGGAGAGCGAGACGGAGGGAGACAGAGGCTCATTCAAAAAAGCAATGCCCCCCTCCCTCCCCGACCCC GAAGAGCCCCCTTCTCTCCATACCTCCCATGCCATACGCCATTGGTCTTGGGCTACCGTCTACATTGTACACACA TCCGTCCATCCATTCGATTATATACTTATACCTTCCTATCCCACCATCACCTCTCCCTCTCCTGCCTCTTCACCA ATACCCCGAACCCCTGGACCAGTCGAACCTCCTCGATCCGGCCGACTTCTCCGTCAACCAGCCGAGCTGACCCGG CCTTTGCCCTTCGAGCCCACGCAACGGAGATCGTCTCGTCTCGTGCCCGAGAGCTCGAGCATGTACGCGTCGAGG CACCTCGTCATCCCAGTTCCCTAA |
| Gene | >Hirsu2|2411 ATGTCTGTACGTCCGTATGCCGACGCTGCCGACAGCCACCATCTTGGAACTCCTCTAGCGTCCGCAAGTCATCTT ACGACGGCGACAGGGTCCCCAGTGAGGGCCAAACGCACGTGTCCGCCACAGACGCCGCCCGTGCTCGCATCCTCC GACTGGCTCTCCACCAAAAAATCCTCGCACCATCTTCACCCAGCCAGAACGAGGAGAGCGAGACGGAGGGAGACA GAGGCTCATTCAAAAAAGCAATGCCCCCCTCCCTCCCCGACCCCGAAGAGCCCCCTTCTCTCCATACCTCCCATG CCATACGCCATTGGTCTTGGGCTACCGTCTACATTGTACACACATCCGTCCATCCATTCGATTATATACTTATAC CTTCCTATCCCACCATCACCTCTCCCTCTCCTGCCTCTTCACCAATACCCCGAACCCCTGGACCAGTCGAACCTC CTCGATCCGGCCGACTTCTCCGTCAACCAGCCGAGCTGACCCGGCCTTTGCCCTTCGAGCCCACGCAACGGAGAT CGTCTCGTCTCGTGCCCGAGAGCTCGAGCATGTACGCGTCGAGGCACCTCGTCATCCCAGTTCCCTAA |