© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|241 |
| Gene name | |
| Location | Contig_1042:6181..7640 |
| Strand | - |
| Gene length (bp) | 1459 |
| Transcript length (bp) | 486 |
| Coding sequence length (bp) | 486 |
| Protein length (aa) | 162 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5881 | 0.6507 | 0.2166 | 0.1237 | 0.1242 | 0.3144 | 0.1663 | 0.2366 | 0.1741 | 0.0097 |
| Orthofinder run ID | 4 |
| Orthogroup | 9057 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|241 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|241 MASKGAEGKEAISIPSSSSVEEEEVPLSASPCSISRSCEVPTSSIFLPTAGKGPVLCPAIVARHDGQDGAGVNKR PPTLPPTSSLPLSPLPRHQGSPHRPWAYLGARMSSPPACCSEARSQQNERGRAPDSKIPLTSNARIHRPDRREQQ TPGSFTFTAAH* |
| Coding | >Hirsu2|241 ATGGCATCGAAGGGGGCGGAAGGAAAAGAGGCCATCTCCATCCCCAGCTCCAGCTCGGTGGAGGAGGAGGAGGTC CCTTTGTCAGCGTCGCCCTGCTCCATCTCCCGTAGCTGCGAGGTACCTACCTCTAGTATCTTCCTACCTACAGCC GGCAAGGGTCCTGTCCTCTGCCCAGCCATCGTTGCTCGTCACGACGGCCAAGACGGCGCCGGCGTCAACAAGCGC CCACCTACTCTACCTCCTACATCCTCTCTGCCTCTCTCTCCTCTTCCCCGCCATCAAGGCTCTCCTCACCGGCCC TGGGCCTACCTTGGCGCTCGCATGTCCTCGCCCCCCGCCTGCTGCTCCGAGGCTCGCTCTCAGCAAAACGAGCGT GGCCGAGCTCCAGACTCCAAGATTCCGCTGACCTCGAACGCACGAATCCACAGGCCCGACAGGCGCGAGCAGCAG ACTCCCGGAAGCTTCACCTTCACGGCCGCCCACTAA |
| Transcript | >Hirsu2|241 ATGGCATCGAAGGGGGCGGAAGGAAAAGAGGCCATCTCCATCCCCAGCTCCAGCTCGGTGGAGGAGGAGGAGGTC CCTTTGTCAGCGTCGCCCTGCTCCATCTCCCGTAGCTGCGAGGTACCTACCTCTAGTATCTTCCTACCTACAGCC GGCAAGGGTCCTGTCCTCTGCCCAGCCATCGTTGCTCGTCACGACGGCCAAGACGGCGCCGGCGTCAACAAGCGC CCACCTACTCTACCTCCTACATCCTCTCTGCCTCTCTCTCCTCTTCCCCGCCATCAAGGCTCTCCTCACCGGCCC TGGGCCTACCTTGGCGCTCGCATGTCCTCGCCCCCCGCCTGCTGCTCCGAGGCTCGCTCTCAGCAAAACGAGCGT GGCCGAGCTCCAGACTCCAAGATTCCGCTGACCTCGAACGCACGAATCCACAGGCCCGACAGGCGCGAGCAGCAG ACTCCCGGAAGCTTCACCTTCACGGCCGCCCACTAA |
| Gene | >Hirsu2|241 ATGGCATCGAAGGGGGCGGAAGGAAAAGAGGCCATCTCCATCCCCAGCTCCAGCTCGGTGGAGGAGGAGGAGGTC CCTTTGTCAGCGTCGCCCTGCTCCATCTCCCGTAGCTGCGAGGTACCTACCTCTAGTATCTTCCTACCTACAGGT AGGTAGGTACCTGACAGAGAGGCCTTTGTCAGCCAGCCGGGCGTAGCTGCTCCGGCTCCGGCCCATCCTTTTCCT ACGCCCACGCCCCTGCGTCGCGCCAGCAGAGGGACCCTGAATCTGGGCCCTCGATGCTCTCTGATCTCGAGGGCC CCTGGTGGCCGCGGCCATCGGGGCAATGAGCGCTCGATCTGGAGGCCACTCGCCATCGTTTTTTTTTGGCGATGC CGCCCGCCCGCCCGCGCGGTCTCAACGAGGTGGATTACTCTGCTGCTGCTGCTGCTGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCATCGCCATCGCCATCGTCAGTTGAA TCGGCCCATCGCGACCGCCGCCCGGCTTTGCCTCGAGGCCCGCCACGCAACCCCCCCCGCCTGGAGGGATCCCAG AGGGATATACATACGGCCTGTCCTCACGCTGCCTCTCCCCTTGGCCTTCTCCCTCTTCTCTTTCTCTTTTTTCGC CCGTCTTGAACCGTTTTGGAAACCCCCCCCCCTTGCCCGCCCCACCCCCCCCCCTGGCCGGCCTCACGCCTCCAA ATCGATCCGTCTACAGCGCTTGGCGCCCACTCCCCCTCCCCCTACTCGATCCCTTGACCCCTTTTCCTCACCTCA CTGTGCTATACGCGGTTGCGACTTATCGTATCCTGTAAGTGACACATGCTTGCGCCCCCAGTTGGACTGCCTCTT TCTGTCGCAGGCATCGCCGCCCTCTCCCCACAGTCCATCACATTGACACACTCCCCGACTCCCCCCCTCACACCC TGCCCTATTATGCCTGTTGACCGCCCACTGCCCTGCCCTCTCTCGACTCGCCTCCCTCTCGCCGATCGCAGCCGG CAAGGGTCCTGTCCTCTGCCCAGCCATCGTTGCTCGTCACGACGGCCAAGACGGCGCCGGCGTCAACAAGCGCCC ACCTACTCTACCTCCTACATCCTCTCTGCCTCTCTCTCCTCTTCCCCGCCATCAAGGCTCTCCTCACCGGCCCTG GGCCTACCTTGGCGCTCGCATGTCCTCGCCCCCCGCCTGCTGCTCCGAGGCTCGCTCTCAGCAAAACGAGCGTGG CCGAGCTCCAGACTCCAAGATTCCGCTGACCTCGAACGCACGAATCCACAGGCCCGACAGGCGCGAGCAGCAGAC TCCCGGAAGCTTCACCTTCACGGCCGCCCACTAA |