Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|2403
Gene name
LocationContig_1572:5139..5821
Strand+
Gene length (bp)682
Transcript length (bp)615
Coding sequence length (bp)615
Protein length (aa) 205

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06991 MFAP1 Microfibril-associated/Pre-mRNA processing 1.2E-11 126 197

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2794 0.5121 0.0477 0.039 0.1026 0.0119 0.0356 0.0593 0.0681 0.0012

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup520
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4146
Ophiocordyceps australis map64 (Brazil) OphauB2|7765
Ophiocordyceps camponoti-floridani Ophcf2|05879
Ophiocordyceps camponoti-floridani Ophcf2|06459
Ophiocordyceps camponoti-floridani Ophcf2|07450
Ophiocordyceps camponoti-rufipedis Ophun1|7207
Ophiocordyceps kimflemingae Ophio5|453
Ophiocordyceps subramaniannii Hirsu2|2403 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|2403
MTANPARPARHRAGKPAGGASSSDSDSDAEAPPPAPTIPAPPKAASAGKIISSLSRVDLSARRQELEKAAEARRA
AAQRAEALAAEQGFVTEEEDSEGEEDDDEDAESESGSGDDDDDDDDDDEESSEEEAPRRLMMRPKFVPKSQRGQT
SKEADGEEARARQAEEEAEKKKRAADELVEEQIRKDLAARAAGKKHWDDEDASG*
Coding >Hirsu2|2403
ATGACTGCGAACCCGGCCAGGCCGGCGCGACACCGCGCCGGGAAGCCGGCCGGCGGCGCATCGTCCTCCGACTCG
GACAGCGACGCCGAAGCGCCCCCCCCCGCGCCGACGATTCCCGCGCCGCCCAAGGCCGCCAGCGCGGGCAAGATC
ATCAGCAGCCTGAGCCGGGTCGATCTCAGCGCGCGCCGCCAGGAGCTGGAGAAGGCTGCCGAGGCGCGCCGGGCC
GCGGCGCAGAGGGCCGAGGCGCTGGCCGCCGAGCAGGGCTTCGTGACGGAGGAGGAAGACAGCGAAGGGGAGGAG
GACGATGACGAGGACGCCGAGTCGGAGTCCGGGTCGGGCGACGACGACGACGACGACGACGACGACGACGAAGAA
AGCAGCGAGGAAGAGGCGCCGCGCAGACTGATGATGCGGCCCAAGTTCGTGCCGAAAAGCCAACGAGGGCAAACG
TCGAAGGAGGCGGACGGGGAAGAGGCGCGGGCGCGGCAGGCGGAGGAGGAGGCGGAGAAGAAGAAGAGGGCGGCG
GACGAGCTGGTCGAGGAGCAGATCCGGAAGGACCTGGCGGCGCGGGCGGCCGGCAAGAAACACTGGGACGACGAG
GACGCGTCCGGCTGA
Transcript >Hirsu2|2403
ATGACTGCGAACCCGGCCAGGCCGGCGCGACACCGCGCCGGGAAGCCGGCCGGCGGCGCATCGTCCTCCGACTCG
GACAGCGACGCCGAAGCGCCCCCCCCCGCGCCGACGATTCCCGCGCCGCCCAAGGCCGCCAGCGCGGGCAAGATC
ATCAGCAGCCTGAGCCGGGTCGATCTCAGCGCGCGCCGCCAGGAGCTGGAGAAGGCTGCCGAGGCGCGCCGGGCC
GCGGCGCAGAGGGCCGAGGCGCTGGCCGCCGAGCAGGGCTTCGTGACGGAGGAGGAAGACAGCGAAGGGGAGGAG
GACGATGACGAGGACGCCGAGTCGGAGTCCGGGTCGGGCGACGACGACGACGACGACGACGACGACGACGAAGAA
AGCAGCGAGGAAGAGGCGCCGCGCAGACTGATGATGCGGCCCAAGTTCGTGCCGAAAAGCCAACGAGGGCAAACG
TCGAAGGAGGCGGACGGGGAAGAGGCGCGGGCGCGGCAGGCGGAGGAGGAGGCGGAGAAGAAGAAGAGGGCGGCG
GACGAGCTGGTCGAGGAGCAGATCCGGAAGGACCTGGCGGCGCGGGCGGCCGGCAAGAAACACTGGGACGACGAG
GACGCGTCCGGCTGA
Gene >Hirsu2|2403
ATGACTGCGAACCCGGCCAGGCCGGCGCGACACCGCGCCGGGAAGCCGGCCGGCGGCGCATCGTCCTCCGACTCG
GACAGCGACGCCGAAGCGCCCCCCCCCGCGCCGACGATTCCCGCGCCGCCCAAGGCCGCCAGCGCGGGCAAGATC
ATCAGCAGCCTGAGCCGGGTCGATCTCAGCGCGCGCCGCCAGGAGCTGGAGAAGGCTGCCGAGGCGCGCCGGGCC
GCGGCGCAGAGGGCCGAGGCGCTGGCCGCCGAGCAGGGCTTCGTGACGGAGGAGGAAGACAGCGAAGGGGAGGAG
GACGATGACGAGGACGCCGAGTCGGAGTCCGGGTCGGGCGACGACGACGACGACGACGACGACGACGACGAAGAA
AGCAGCGAGGAAGAGGCGCCGCGCAGACTGATGATGCGGCCCAAGTTCGTGCCGAAAAGCCAACGAGGGCAAACG
TCGAAGGAGGCGGACGGGGAAGAGGCGCGGGCGCGGCAGGCGGAGGAGGAGGCGGAGAAGAAGAAGAGGGCGGCG
GACGAGCTGGTCGAGGAGCAGATCCGGAAGGACCTGGCGGCGCGGGCGGCCGGCAAGAAACACTGGGACGACGAG
GACGCGTCCGGGTCGGACGTGGACACGACGGACGGGCTCGACCCGGAAGCGGAGGAGGCGGCGTGGCGGGTGCGG
GAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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