© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|2401 |
| Gene name | |
| Location | Contig_1571:3483..4125 |
| Strand | + |
| Gene length (bp) | 642 |
| Transcript length (bp) | 642 |
| Coding sequence length (bp) | 642 |
| Protein length (aa) | 214 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.68 | 0.5924 | 0.2478 | 0.1119 | 0.2519 | 0.0786 | 0.0671 | 0.1706 | 0.1501 | 0.003 |
| Orthofinder run ID | 4 |
| Orthogroup | 9056 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|2401 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|2401 MASRLAPDGHAQSPASGQTSFRGPRGTARSGQGSWADVASVTAPAPPPSPVPNTGPGLTDEAPTGTRPRSLAVRA PTYSLQPTAYRPQRAQAYSGRRGPPCKPRPAAVASPGGRAAAALAVDGREAWGLAQPCPRAANGGKWPETAPCPP IFRAQSGGPAAGDANMRPNAQCGCGRRPMPCTVPVGRAATGAHRSMADADDDDDGLVGLDGLA* |
| Coding | >Hirsu2|2401 ATGGCTTCCCGCCTTGCGCCGGACGGGCACGCGCAATCGCCAGCCAGCGGGCAGACGTCGTTTCGAGGTCCAAGG GGGACGGCGAGGTCGGGACAAGGCAGTTGGGCAGACGTGGCCAGTGTCACTGCTCCAGCACCGCCTCCCTCGCCT GTACCCAACACAGGTCCGGGCCTCACCGACGAGGCGCCCACGGGCACCCGACCTCGCAGCCTGGCCGTACGGGCA CCTACATACAGCCTACAGCCTACAGCCTACAGGCCACAGCGCGCCCAGGCTTACAGCGGCCGCCGTGGCCCCCCC TGTAAGCCGAGGCCGGCCGCCGTGGCCAGCCCCGGAGGGCGTGCGGCGGCGGCGCTGGCGGTGGATGGGCGGGAA GCCTGGGGACTTGCTCAGCCCTGCCCGCGCGCCGCCAATGGGGGCAAGTGGCCTGAAACGGCGCCCTGCCCGCCT ATCTTTAGGGCCCAATCAGGCGGCCCCGCCGCGGGCGATGCAAACATGAGGCCAAATGCGCAATGCGGTTGCGGG CGCCGCCCAATGCCCTGCACAGTGCCCGTGGGCCGGGCGGCTACGGGGGCGCATCGCAGCATGGCCGACGCCGAC GACGACGACGACGGGCTTGTCGGGCTTGACGGGCTTGCTTGA |
| Transcript | >Hirsu2|2401 ATGGCTTCCCGCCTTGCGCCGGACGGGCACGCGCAATCGCCAGCCAGCGGGCAGACGTCGTTTCGAGGTCCAAGG GGGACGGCGAGGTCGGGACAAGGCAGTTGGGCAGACGTGGCCAGTGTCACTGCTCCAGCACCGCCTCCCTCGCCT GTACCCAACACAGGTCCGGGCCTCACCGACGAGGCGCCCACGGGCACCCGACCTCGCAGCCTGGCCGTACGGGCA CCTACATACAGCCTACAGCCTACAGCCTACAGGCCACAGCGCGCCCAGGCTTACAGCGGCCGCCGTGGCCCCCCC TGTAAGCCGAGGCCGGCCGCCGTGGCCAGCCCCGGAGGGCGTGCGGCGGCGGCGCTGGCGGTGGATGGGCGGGAA GCCTGGGGACTTGCTCAGCCCTGCCCGCGCGCCGCCAATGGGGGCAAGTGGCCTGAAACGGCGCCCTGCCCGCCT ATCTTTAGGGCCCAATCAGGCGGCCCCGCCGCGGGCGATGCAAACATGAGGCCAAATGCGCAATGCGGTTGCGGG CGCCGCCCAATGCCCTGCACAGTGCCCGTGGGCCGGGCGGCTACGGGGGCGCATCGCAGCATGGCCGACGCCGAC GACGACGACGACGGGCTTGTCGGGCTTGACGGGCTTGCTTGA |
| Gene | >Hirsu2|2401 ATGGCTTCCCGCCTTGCGCCGGACGGGCACGCGCAATCGCCAGCCAGCGGGCAGACGTCGTTTCGAGGTCCAAGG GGGACGGCGAGGTCGGGACAAGGCAGTTGGGCAGACGTGGCCAGTGTCACTGCTCCAGCACCGCCTCCCTCGCCT GTACCCAACACAGGTCCGGGCCTCACCGACGAGGCGCCCACGGGCACCCGACCTCGCAGCCTGGCCGTACGGGCA CCTACATACAGCCTACAGCCTACAGCCTACAGGCCACAGCGCGCCCAGGCTTACAGCGGCCGCCGTGGCCCCCCC TGTAAGCCGAGGCCGGCCGCCGTGGCCAGCCCCGGAGGGCGTGCGGCGGCGGCGCTGGCGGTGGATGGGCGGGAA GCCTGGGGACTTGCTCAGCCCTGCCCGCGCGCCGCCAATGGGGGCAAGTGGCCTGAAACGGCGCCCTGCCCGCCT ATCTTTAGGGCCCAATCAGGCGGCCCCGCCGCGGGCGATGCAAACATGAGGCCAAATGCGCAATGCGGTTGCGGG CGCCGCCCAATGCCCTGCACAGTGCCCGTGGGCCGGGCGGCTACGGGGGCGCATCGCAGCATGGCCGACGCCGAC GACGACGACGACGGGCTTGTCGGGCTTGACGGGCTTGCTTGA |