Protein ID | Hirsu2|2392 |
Gene name | |
Location | Contig_157:21232..22179 |
Strand | - |
Gene length (bp) | 947 |
Transcript length (bp) | 852 |
Coding sequence length (bp) | 852 |
Protein length (aa) | 284 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04176 | TIP41 | TIP41-like family | 3.0E-66 | 58 | 242 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5FW12|TIPRL_XENTR | TIP41-like protein OS=Xenopus tropicalis GN=tiprl PE=2 SV=1 | 29 | 241 | 9.0E-48 |
sp|Q9USK5|TIP41_SCHPO | Type 2A phosphatase activator tip41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip41 PE=2 SV=1 | 29 | 281 | 4.0E-42 |
sp|Q54MI6|TIPRL_DICDI | TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1 | 31 | 242 | 3.0E-41 |
sp|Q6IRA8|TIPRL_XENLA | TIP41-like protein OS=Xenopus laevis GN=tiprl PE=2 SV=1 | 29 | 241 | 5.0E-41 |
sp|Q8BH58|TIPRL_MOUSE | TIP41-like protein OS=Mus musculus GN=Tiprl PE=1 SV=1 | 29 | 266 | 5.0E-41 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5FW12|TIPRL_XENTR | TIP41-like protein OS=Xenopus tropicalis GN=tiprl PE=2 SV=1 | 29 | 241 | 9.0E-48 |
sp|Q9USK5|TIP41_SCHPO | Type 2A phosphatase activator tip41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip41 PE=2 SV=1 | 29 | 281 | 4.0E-42 |
sp|Q54MI6|TIPRL_DICDI | TIP41-like protein OS=Dictyostelium discoideum GN=tiprl PE=3 SV=1 | 31 | 242 | 3.0E-41 |
sp|Q6IRA8|TIPRL_XENLA | TIP41-like protein OS=Xenopus laevis GN=tiprl PE=2 SV=1 | 29 | 241 | 5.0E-41 |
sp|Q8BH58|TIPRL_MOUSE | TIP41-like protein OS=Mus musculus GN=Tiprl PE=1 SV=1 | 29 | 266 | 5.0E-41 |
sp|A2VCX1|TIPRL_RAT | TIP41-like protein OS=Rattus norvegicus GN=Tiprl PE=1 SV=1 | 29 | 266 | 5.0E-41 |
sp|O75663|TIPRL_HUMAN | TIP41-like protein OS=Homo sapiens GN=TIPRL PE=1 SV=2 | 29 | 267 | 1.0E-40 |
sp|Q12199|TIP41_YEAST | Type 2A phosphatase activator TIP41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIP41 PE=1 SV=1 | 29 | 281 | 3.0E-35 |
sp|P34274|TIPRL_CAEEL | TIP41-like protein OS=Caenorhabditis elegans GN=C02C2.6 PE=3 SV=3 | 56 | 241 | 2.0E-30 |
GO Term | Description | Terminal node |
---|---|---|
GO:0043666 | regulation of phosphoprotein phosphatase activity | Yes |
GO:0019222 | regulation of metabolic process | No |
GO:0035303 | regulation of dephosphorylation | No |
GO:0008150 | biological_process | No |
GO:0065009 | regulation of molecular function | No |
GO:0050794 | regulation of cellular process | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0035304 | regulation of protein dephosphorylation | No |
GO:0051174 | regulation of phosphorus metabolic process | No |
GO:0019220 | regulation of phosphate metabolic process | No |
GO:0050789 | regulation of biological process | No |
GO:0065007 | biological regulation | No |
GO:0010921 | regulation of phosphatase activity | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0051336 | regulation of hydrolase activity | No |
GO:0051246 | regulation of protein metabolic process | No |
GO:0031399 | regulation of protein modification process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0050790 | regulation of catalytic activity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6613 | 0.5014 | 0.0902 | 0.1112 | 0.2264 | 0.0305 | 0.0673 | 0.1497 | 0.071 | 0.0232 |
Orthofinder run ID | 4 |
Orthogroup | 2070 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2392 MNHISHPNEPFPSADELSAATTSHTQQRFRVSTCKLPISKAGAIEAMTDRIGIPLPEMIFGDNQVEVRHTPSGWS IGFNTPDALDAVDKTDRHMLKVAYARDWESTREGTTRTIKEVVKPYDWSYSTAYRGTVRPPPPGADAVASFRPTD KQIPIELLKRRDPMLFFDEVVLYESELDDNGISIYSAKLRVHEKRMLLLCRLFMRLDNVLVRIRDTRLYVDFCTD EVLREYTAKEATFDHVKRALLMTGRLPDDVTVCLRDPNVLDPLLAVVEHKTEALNLAS* |
Coding | >Hirsu2|2392 ATGAACCACATATCGCACCCCAACGAGCCGTTCCCGTCGGCGGACGAGCTGTCGGCGGCGACGACGTCGCACACG CAGCAGCGCTTCCGCGTCTCGACCTGCAAGCTGCCCATCTCCAAGGCGGGCGCGATCGAGGCCATGACGGACCGC ATCGGCATCCCGCTGCCGGAGATGATCTTCGGCGACAACCAGGTCGAGGTCCGGCACACGCCCTCGGGCTGGTCC ATCGGCTTCAACACGCCCGACGCGCTCGACGCCGTCGACAAGACGGACCGCCACATGCTCAAGGTCGCCTACGCC CGCGACTGGGAGAGCACCCGCGAGGGCACCACCCGCACCATCAAGGAGGTCGTCAAGCCCTACGACTGGAGCTAC TCGACCGCCTACCGCGGCACCGTCCGCCCCCCGCCCCCCGGCGCCGACGCCGTCGCCTCCTTCCGCCCGACCGAC AAGCAGATCCCGATCGAGCTGCTGAAGCGCCGCGACCCCATGCTCTTCTTCGACGAGGTCGTCCTGTACGAGAGC GAGCTCGACGACAACGGCATCTCCATCTACAGCGCCAAGCTGCGCGTCCACGAGAAGCGCATGCTGCTCCTCTGC CGCCTCTTCATGCGCCTCGACAACGTCCTCGTCCGCATTCGCGACACCCGCCTCTACGTCGACTTCTGCACCGAC GAGGTCCTGAGGGAGTACACGGCCAAGGAGGCAACCTTTGACCACGTCAAGAGGGCTCTGCTCATGACGGGGAGA TTACCGGACGACGTCACCGTCTGCCTTCGAGATCCAAACGTGCTAGATCCGCTGCTCGCCGTCGTCGAGCACAAA ACGGAAGCCCTCAACCTGGCGTCATAG |
Transcript | >Hirsu2|2392 ATGAACCACATATCGCACCCCAACGAGCCGTTCCCGTCGGCGGACGAGCTGTCGGCGGCGACGACGTCGCACACG CAGCAGCGCTTCCGCGTCTCGACCTGCAAGCTGCCCATCTCCAAGGCGGGCGCGATCGAGGCCATGACGGACCGC ATCGGCATCCCGCTGCCGGAGATGATCTTCGGCGACAACCAGGTCGAGGTCCGGCACACGCCCTCGGGCTGGTCC ATCGGCTTCAACACGCCCGACGCGCTCGACGCCGTCGACAAGACGGACCGCCACATGCTCAAGGTCGCCTACGCC CGCGACTGGGAGAGCACCCGCGAGGGCACCACCCGCACCATCAAGGAGGTCGTCAAGCCCTACGACTGGAGCTAC TCGACCGCCTACCGCGGCACCGTCCGCCCCCCGCCCCCCGGCGCCGACGCCGTCGCCTCCTTCCGCCCGACCGAC AAGCAGATCCCGATCGAGCTGCTGAAGCGCCGCGACCCCATGCTCTTCTTCGACGAGGTCGTCCTGTACGAGAGC GAGCTCGACGACAACGGCATCTCCATCTACAGCGCCAAGCTGCGCGTCCACGAGAAGCGCATGCTGCTCCTCTGC CGCCTCTTCATGCGCCTCGACAACGTCCTCGTCCGCATTCGCGACACCCGCCTCTACGTCGACTTCTGCACCGAC GAGGTCCTGAGGGAGTACACGGCCAAGGAGGCAACCTTTGACCACGTCAAGAGGGCTCTGCTCATGACGGGGAGA TTACCGGACGACGTCACCGTCTGCCTTCGAGATCCAAACGTGCTAGATCCGCTGCTCGCCGTCGTCGAGCACAAA ACGGAAGCCCTCAACCTGGCGTCATAG |
Gene | >Hirsu2|2392 ATGAACCACATATCGCACCCCAACGAGCCGTTCCCGTCGGCGGACGAGCTGTCGGCGGCGACGACGTCGCACACG CAGCAGCGCTTCCGCGTCTCGACCTGCAAGCTGCCCATCTCCAAGGCGGGCGCGATCGAGGCCATGACGGACCGC ATCGGCATCCCGCTGCCGGAGATGATCTTCGGCGACAACCAGGTCGAGGTCCGGCACACGCCCTCGGGCTGGTCC ATCGGCTTCAACACGCCCGACGCGCTCGACGCCGTCGACAAGACGGACCGCCACATGCTCAAGGTCGCCTACGCC CGCGACTGGGAGAGCACCCGCGAGGGCACCACCCGCACCATCAAGGAGGTCGTCAAGCCCTACGACTGGAGCTAC TCGACCGCCTACCGCGGCACCGTCCGCCCCCCGCCCCCCGGCGCCGACGCCGTCGCCTCCTTCCGCCCGACCGAC AAGCAGATCCCGATCGAGCTGCTGAAGCGCCGCGACCCCATGCTCTTCTTCGACGAGGTCGTCCTGTACGAGAGC GAGCTCGACGACAACGGCATCTCCATCTACAGCGCCAAGCTGCGCGTCCACGAGAAGCGCATGCTGCTCCTCTGC CGCCTCTTCATGCGCCTCGACAACGTCCTCGTCCGCATTCGCGACACCCGCCTCTACGTCGACTTCTGCACCGAC GAGGTCCTGAGGGAGTACACGGCCAAGGAGGCAACCTTTGACCACGTCAAGAGGGTAACACTTCCCTCCCTTCTC CCCTCCACTTTCTTCTGTCCCCATCTCCAAGACAGCGCTTGCTGACCTTGCTTGCTCCCCCGCCCTCGAAACAGG CTCTGCTCATGACGGGGAGATTACCGGACGACGTCACCGTCTGCCTTCGAGATCCAAACGTGCTAGATCCGCTGC TCGCCGTCGTCGAGCACAAAACGGAAGCCCTCAACCTGGCGTCATAG |