© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|239 |
| Gene name | |
| Location | Contig_1042:25..1061 |
| Strand | - |
| Gene length (bp) | 1036 |
| Transcript length (bp) | 864 |
| Coding sequence length (bp) | 864 |
| Protein length (aa) | 288 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07156 | Prenylcys_lyase | Prenylcysteine lyase | 2.1E-26 | 141 | 246 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 9.9E-11 | 33 | 95 |
| PF01266 | DAO | FAD dependent oxidoreductase | 5.4E-07 | 31 | 73 |
| PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 5.2E-07 | 39 | 114 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q95KC9|PCYOX_MACFA | Prenylcysteine oxidase OS=Macaca fascicularis GN=PCYOX1 PE=2 SV=1 | 31 | 231 | 8.0E-14 |
| sp|P57681|PCYOX_ARATH | Farnesylcysteine lyase OS=Arabidopsis thaliana GN=FLCY PE=1 SV=1 | 8 | 248 | 2.0E-13 |
| sp|Q99ML5|PCYOX_RAT | Prenylcysteine oxidase OS=Rattus norvegicus GN=Pcyox1 PE=1 SV=1 | 29 | 228 | 2.0E-13 |
| sp|Q9CQF9|PCYOX_MOUSE | Prenylcysteine oxidase OS=Mus musculus GN=Pcyox1 PE=1 SV=1 | 31 | 228 | 4.0E-13 |
| sp|Q0P5H1|PCYXL_BOVIN | Prenylcysteine oxidase-like OS=Bos taurus GN=PCYOX1L PE=2 SV=1 | 30 | 233 | 6.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q95KC9|PCYOX_MACFA | Prenylcysteine oxidase OS=Macaca fascicularis GN=PCYOX1 PE=2 SV=1 | 31 | 231 | 8.0E-14 |
| sp|P57681|PCYOX_ARATH | Farnesylcysteine lyase OS=Arabidopsis thaliana GN=FLCY PE=1 SV=1 | 8 | 248 | 2.0E-13 |
| sp|Q99ML5|PCYOX_RAT | Prenylcysteine oxidase OS=Rattus norvegicus GN=Pcyox1 PE=1 SV=1 | 29 | 228 | 2.0E-13 |
| sp|Q9CQF9|PCYOX_MOUSE | Prenylcysteine oxidase OS=Mus musculus GN=Pcyox1 PE=1 SV=1 | 31 | 228 | 4.0E-13 |
| sp|Q0P5H1|PCYXL_BOVIN | Prenylcysteine oxidase-like OS=Bos taurus GN=PCYOX1L PE=2 SV=1 | 30 | 233 | 6.0E-09 |
| sp|Q8NBM8|PCYXL_HUMAN | Prenylcysteine oxidase-like OS=Homo sapiens GN=PCYOX1L PE=1 SV=2 | 30 | 233 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | Yes |
| GO:0030328 | prenylcysteine catabolic process | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003824 | catalytic activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901565 | organonitrogen compound catabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0009987 | cellular process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0030329 | prenylcysteine metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:0042219 | cellular modified amino acid catabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|239 MRSPLGLVLAAAAAALGLRAAADSEREVRNVAIIGAGAAGASTAYHLRQYAQAAGLAVNVTIFERGGRAGGRSLT VGAYGDAAQPLELGASIFVSLNQILCNASRALGLTLAEAGAGAEPGDVTLVWDGADVVFRSVEGEAWWWLAGRLL WRYGAAPYRAVRLVRAVVANFLRLYDPPFFPFRSLTRRVYELGLHKVTGLTGEQFLAENKIDAGFARDVMQPATR VNYASNLAHIHGLEAMVSFATDGAQRRRPRPQHVRRRHRDRQGRHAARRPPPVPPLHPTRHH* |
| Coding | >Hirsu2|239 ATGCGCTCACCGCTGGGCCTCGTCCTGGCGGCGGCCGCGGCGGCACTGGGGCTGAGGGCGGCGGCGGATTCCGAG CGGGAGGTCAGGAACGTGGCCATCATCGGTGCCGGGGCGGCTGGCGCGTCGACGGCGTACCACCTGCGGCAGTAC GCGCAGGCGGCCGGGCTGGCCGTCAACGTAACCATCTTCGAGCGCGGCGGGCGCGCGGGCGGGCGCAGCCTGACG GTGGGCGCCTACGGCGACGCGGCGCAGCCGCTCGAGCTGGGCGCCTCCATCTTCGTCAGCCTCAACCAGATCCTG TGCAACGCGAGCCGGGCGCTGGGCCTGACGCTGGCCGAGGCCGGCGCCGGCGCCGAGCCGGGCGACGTCACCCTC GTCTGGGACGGCGCCGACGTCGTCTTCCGCTCCGTCGAGGGCGAGGCCTGGTGGTGGTTGGCGGGGCGGCTGCTG TGGCGATACGGCGCCGCGCCCTACCGCGCCGTCCGCCTCGTCCGCGCCGTCGTCGCTAACTTCCTTCGTCTCTAC GATCCGCCCTTCTTCCCGTTCCGCTCGCTGACCCGCCGCGTGTACGAGCTTGGCCTGCATAAGGTCACTGGATTG ACGGGCGAGCAGTTCCTGGCGGAGAACAAGATCGATGCGGGATTCGCGCGCGACGTCATGCAGCCGGCGACGCGC GTCAACTACGCCTCCAACCTGGCCCACATCCACGGCCTCGAGGCCATGGTCTCCTTCGCCACCGACGGCGCCCAG CGGCGCCGCCCTCGTCCGCAACACGTCCGTCGCCGCCATCGAGATCGACAAGGGCGCCATGCGGCCCGGCGCCCG CCGCCGGTACCGCCTCTCCACCCGACCCGCCACCACTGA |
| Transcript | >Hirsu2|239 ATGCGCTCACCGCTGGGCCTCGTCCTGGCGGCGGCCGCGGCGGCACTGGGGCTGAGGGCGGCGGCGGATTCCGAG CGGGAGGTCAGGAACGTGGCCATCATCGGTGCCGGGGCGGCTGGCGCGTCGACGGCGTACCACCTGCGGCAGTAC GCGCAGGCGGCCGGGCTGGCCGTCAACGTAACCATCTTCGAGCGCGGCGGGCGCGCGGGCGGGCGCAGCCTGACG GTGGGCGCCTACGGCGACGCGGCGCAGCCGCTCGAGCTGGGCGCCTCCATCTTCGTCAGCCTCAACCAGATCCTG TGCAACGCGAGCCGGGCGCTGGGCCTGACGCTGGCCGAGGCCGGCGCCGGCGCCGAGCCGGGCGACGTCACCCTC GTCTGGGACGGCGCCGACGTCGTCTTCCGCTCCGTCGAGGGCGAGGCCTGGTGGTGGTTGGCGGGGCGGCTGCTG TGGCGATACGGCGCCGCGCCCTACCGCGCCGTCCGCCTCGTCCGCGCCGTCGTCGCTAACTTCCTTCGTCTCTAC GATCCGCCCTTCTTCCCGTTCCGCTCGCTGACCCGCCGCGTGTACGAGCTTGGCCTGCATAAGGTCACTGGATTG ACGGGCGAGCAGTTCCTGGCGGAGAACAAGATCGATGCGGGATTCGCGCGCGACGTCATGCAGCCGGCGACGCGC GTCAACTACGCCTCCAACCTGGCCCACATCCACGGCCTCGAGGCCATGGTCTCCTTCGCCACCGACGGCGCCCAG CGGCGCCGCCCTCGTCCGCAACACGTCCGTCGCCGCCATCGAGATCGACAAGGGCGCCATGCGGCCCGGCGCCCG CCGCCGGTACCGCCTCTCCACCCGACCCGCCACCACTGA |
| Gene | >Hirsu2|239 ATGCGCTCACCGCTGGGCCTCGTCCTGGCGGCGGCCGCGGCGGCACTGGGGCTGAGGGCGGCGGCGGATTCCGAG CGGGAGGTCAGGAACGTGGCCATCATCGGTGAGTAGGGCCTTTTCATCCCCTTCTTTTCCCGTTCCGCTGACGTC GCCACCCCAGGTGCCGGGGCGGCTGGCGCGTCGACGGCGTACCACCTGCGGCAGTACGCGCAGGCGGCCGGGCTG GCCGTCAACGTAACCATCTTCGAGCGCGGCGGGCGCGCGGGCGGGCGCAGCCTGACGGTGGGCGCCTACGGCGAC GCGGCGCAGCCGCTCGAGCTGGGCGCCTCCATCTTCGTCAGCCTCAACCAGATCCTGTGCAACGCGAGCCGGGCG CTGGGCCTGACGCTGGCCGAGGCCGGCGCCGGCGCCGAGCCGGGCGACGTCACCCTCGTCTGGGACGGCGCCGAC GTCGTCTTCCGCTCCGTCGAGGGCGAGGCCTGGTGGTGGTTGGCGGGGCGGCTGCTGTGGCGATACGGCGCCGCG CCCTACCGCGCCGTCCGCCTCGTCCGCGCCGTCGTCGCTAACTTCCTTCGTCTCTACGATCCGCCCTTCTTCCCG TTCCGCTCGCTGACCCGCCGCGTGTACGAGCTTGGCCTGCATAAGGTCACTGGATTGACGGGCGAGCAGTTCCTG GCGGAGAACAAGGTGAGGGGAGTTTGGGAGGTGGCGACATGAAAAAAGAAGAAGAAAACGAGCTGACGATACGAC AGATCGATGCGGGATTCGCGCGCGACGTCATGCAGCCGGCGACGCGCGTCAACTACGCCTCCAACCTGGCCCACA TCCACGGCCTCGAGGCCATGGTCTCCTTCGCCACCGACGGCGCCGTCGCCGTCGCCGGCGGCAACTGGCAGATCT TCGACCGCATGGTCCGCAGCAGCGGCGCCGCCCTCGTCCGCAACACGTCCGTCGCCGCCATCGAGATCGACAAGG GCGCCATGCGGCCCGGCGCCCGCCGCCGGTACCGCCTCTCCACCCGACCCGCCACCACTGA |