Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|2384
Gene name
Location	Contig_157:511..1401
Strand	+
Gene length (bp)	890
Transcript length (bp)	804
Coding sequence length (bp)	804
Protein length (aa)	268

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	4.1E-07	6	84
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	3.7E-07	112	232

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12415\|TFC7_YEAST	Transcription factor tau 55 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFC7 PE=1 SV=1	1	208	5.0E-23
sp\|P53929\|YNK8_YEAST	Uncharacterized protein YNL108C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL108C PE=1 SV=1	1	251	2.0E-19

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|2384 MPLEKIYVVRHGFRSNWLVDPATGTYSAYIPSPTGIPADPALTSHGLGQARELAGHLLTLDPPIEAVYSSPFYRC LQTLAPFIQLQQSRRLAAEHGDEADARPPRPVRHAATEIRPEHGIREWFGSAPFDHPQPAPVHTLKSLFPAVDDK YESIVTPPSRGETLAQLQERVALALRGIIRQCDASGARAAVLCTHAAVVILLGRVLTGLVPDSADAEDFHAYTCG LSVFRRQRLDQGKSADPATPGQQVGWPKACWPPPSMSASPLV*
Coding	>Hirsu2\|2384 ATGCCGCTGGAGAAGATCTACGTCGTCCGCCACGGGTTCCGCTCTAACTGGCTCGTCGACCCGGCCACCGGCACC TACTCGGCCTACATCCCCTCACCAACGGGAATCCCTGCCGATCCCGCCCTCACCTCCCACGGCCTCGGCCAGGCC AGAGAGCTGGCCGGCCACCTGCTTACCCTCGACCCGCCCATAGAGGCCGTCTACTCCAGTCCCTTCTACCGCTGC CTCCAGACACTGGCCCCCTTCATCCAGCTCCAGCAGAGCCGGCGGCTGGCTGCCGAGCATGGCGACGAGGCCGAC GCCCGTCCGCCTCGGCCCGTCCGCCATGCCGCGACCGAGATTCGTCCCGAACATGGCATTCGTGAGTGGTTTGGC TCTGCCCCCTTCGACCATCCTCAGCCAGCCCCCGTCCACACCCTCAAGTCGCTCTTCCCCGCCGTCGACGACAAG TACGAGTCCATTGTCACGCCGCCCAGTCGGGGAGAGACGTTGGCGCAGCTGCAAGAGCGAGTCGCCCTCGCCCTG CGTGGCATCATCAGACAGTGCGACGCCAGCGGGGCCCGCGCCGCCGTCCTGTGCACCCATGCCGCCGTCGTCATC CTGCTGGGCCGCGTCCTCACGGGGCTGGTGCCGGATAGCGCCGACGCTGAGGATTTCCACGCATACACGTGCGGC CTGAGCGTCTTTCGGAGACAGCGACTGGACCAAGGCAAGTCGGCAGATCCTGCCACGCCGGGCCAACAGGTCGGC TGGCCGAAAGCGTGTTGGCCGCCGCCGTCGATGTCCGCCTCCCCACTGGTCTGA
Transcript	>Hirsu2\|2384 ATGCCGCTGGAGAAGATCTACGTCGTCCGCCACGGGTTCCGCTCTAACTGGCTCGTCGACCCGGCCACCGGCACC TACTCGGCCTACATCCCCTCACCAACGGGAATCCCTGCCGATCCCGCCCTCACCTCCCACGGCCTCGGCCAGGCC AGAGAGCTGGCCGGCCACCTGCTTACCCTCGACCCGCCCATAGAGGCCGTCTACTCCAGTCCCTTCTACCGCTGC CTCCAGACACTGGCCCCCTTCATCCAGCTCCAGCAGAGCCGGCGGCTGGCTGCCGAGCATGGCGACGAGGCCGAC GCCCGTCCGCCTCGGCCCGTCCGCCATGCCGCGACCGAGATTCGTCCCGAACATGGCATTCGTGAGTGGTTTGGC TCTGCCCCCTTCGACCATCCTCAGCCAGCCCCCGTCCACACCCTCAAGTCGCTCTTCCCCGCCGTCGACGACAAG TACGAGTCCATTGTCACGCCGCCCAGTCGGGGAGAGACGTTGGCGCAGCTGCAAGAGCGAGTCGCCCTCGCCCTG CGTGGCATCATCAGACAGTGCGACGCCAGCGGGGCCCGCGCCGCCGTCCTGTGCACCCATGCCGCCGTCGTCATC CTGCTGGGCCGCGTCCTCACGGGGCTGGTGCCGGATAGCGCCGACGCTGAGGATTTCCACGCATACACGTGCGGC CTGAGCGTCTTTCGGAGACAGCGACTGGACCAAGGCAAGTCGGCAGATCCTGCCACGCCGGGCCAACAGGTCGGC TGGCCGAAAGCGTGTTGGCCGCCGCCGTCGATGTCCGCCTCCCCACTGGTCTGA
Gene	>Hirsu2\|2384 ATGCCGCTGGAGAAGATCTACGTCGTCCGCCACGGGGTAAGTCGACGGCACAACACGCACCTTTCATCCCCGACC GCCCAGTCGCCCTGTATTGACAGTCCCCATTGTCGACGCGGGCCTAGTTCCGCTCTAACTGGCTCGTCGACCCGG CCACCGGCACCTACTCGGCCTACATCCCCTCACCAACGGGAATCCCTGCCGATCCCGCCCTCACCTCCCACGGCC TCGGCCAGGCCAGAGAGCTGGCCGGCCACCTGCTTACCCTCGACCCGCCCATAGAGGCCGTCTACTCCAGTCCCT TCTACCGCTGCCTCCAGACACTGGCCCCCTTCATCCAGCTCCAGCAGAGCCGGCGGCTGGCTGCCGAGCATGGCG ACGAGGCCGACGCCCGTCCGCCTCGGCCCGTCCGCCATGCCGCGACCGAGATTCGTCCCGAACATGGCATTCGTG AGTGGTTTGGCTCTGCCCCCTTCGACCATCCTCAGCCAGCCCCCGTCCACACCCTCAAGTCGCTCTTCCCCGCCG TCGACGACAAGTACGAGTCCATTGTCACGCCGCCCAGTCGGGGAGAGACGTTGGCGCAGCTGCAAGAGCGAGTCG CCCTCGCCCTGCGTGGCATCATCAGACAGTGCGACGCCAGCGGGGCCCGCGCCGCCGTCCTGTGCACCCATGCCG CCGTCGTCATCCTGCTGGGCCGCGTCCTCACGGGGCTGGTGCCGGATAGCGCCGACGCTGAGGATTTCCACGCAT ACACGTGCGGCCTGAGCGTCTTTCGGAGACAGCGACTGGACCAAGGCAAGTCGGCAGATCCTGCCACGCCGGGCC AACAGGTCGGCTGGCCGAAAGCGTGTTGGCCGCCGCCGTCGATGTCCGCCTCCCCACTGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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