Protein ID | Hirsu2|2381 |
Gene name | |
Location | Contig_1568:3272..3911 |
Strand | - |
Gene length (bp) | 639 |
Transcript length (bp) | 639 |
Coding sequence length (bp) | 639 |
Protein length (aa) | 213 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03364 | Polyketide_cyc | Polyketide cyclase / dehydrase and lipid transport | 1.2E-23 | 61 | 198 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9USM9|COQ10_SCHPO | Coenzyme Q-binding protein coq10, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=coq10 PE=3 SV=1 | 51 | 202 | 6.0E-22 |
sp|Q6PBN4|CQ10X_DANRE | Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2 | 50 | 212 | 4.0E-18 |
sp|Q75CC1|COQ10_ASHGO | Coenzyme Q-binding protein COQ10, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COQ10 PE=3 SV=1 | 20 | 201 | 3.0E-15 |
sp|Q6GNP0|CQ10B_XENLA | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Xenopus laevis GN=coq10b PE=2 SV=1 | 18 | 206 | 4.0E-15 |
sp|O68560|RATA_PSEAE | Ribosome association toxin RatA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ratA PE=3 SV=1 | 48 | 206 | 3.0E-13 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9USM9|COQ10_SCHPO | Coenzyme Q-binding protein coq10, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=coq10 PE=3 SV=1 | 51 | 202 | 6.0E-22 |
sp|Q6PBN4|CQ10X_DANRE | Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2 | 50 | 212 | 4.0E-18 |
sp|Q75CC1|COQ10_ASHGO | Coenzyme Q-binding protein COQ10, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=COQ10 PE=3 SV=1 | 20 | 201 | 3.0E-15 |
sp|Q6GNP0|CQ10B_XENLA | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Xenopus laevis GN=coq10b PE=2 SV=1 | 18 | 206 | 4.0E-15 |
sp|O68560|RATA_PSEAE | Ribosome association toxin RatA OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ratA PE=3 SV=1 | 48 | 206 | 3.0E-13 |
sp|Q08058|COQ10_YEAST | Coenzyme Q-binding protein COQ10, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COQ10 PE=1 SV=1 | 26 | 210 | 5.0E-13 |
sp|Q556V1|COQ10_DICDI | Coenzyme Q-binding protein COQ10, mitochondrial OS=Dictyostelium discoideum GN=coq10-1 PE=3 SV=1 | 27 | 210 | 5.0E-13 |
sp|Q8FEY4|PAST_ECOL6 | Persistence and stress-resistance toxin PasT OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=pasT PE=1 SV=1 | 48 | 204 | 7.0E-13 |
sp|Q6DFA6|CQ10A_XENLA | Coenzyme Q-binding protein COQ10 homolog A, mitochondrial OS=Xenopus laevis GN=coq10b-a PE=2 SV=1 | 53 | 209 | 2.0E-12 |
sp|Q8MLL3|COQ10_DROME | Coenzyme Q-binding protein COQ10, mitochondrial OS=Drosophila melanogaster GN=Coq10 PE=2 SV=1 | 57 | 212 | 2.0E-12 |
sp|Q567E6|CQ10B_DANRE | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Danio rerio GN=coq10b PE=2 SV=1 | 15 | 210 | 3.0E-12 |
sp|P0AGL6|RATA_SHIFL | Ribosome association toxin RatA OS=Shigella flexneri GN=ratA PE=3 SV=1 | 48 | 204 | 4.0E-12 |
sp|P0AGL5|RATA_ECOLI | Ribosome association toxin RatA OS=Escherichia coli (strain K12) GN=ratA PE=1 SV=1 | 48 | 204 | 4.0E-12 |
sp|Q5RD79|CQ10B_PONAB | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Pongo abelii GN=COQ10B PE=2 SV=1 | 21 | 210 | 5.0E-11 |
sp|Q9H8M1|CQ10B_HUMAN | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Homo sapiens GN=COQ10B PE=2 SV=1 | 21 | 210 | 6.0E-11 |
sp|Q96MF6|CQ10A_HUMAN | Coenzyme Q-binding protein COQ10 homolog A, mitochondrial OS=Homo sapiens GN=COQ10A PE=2 SV=2 | 53 | 210 | 7.0E-11 |
sp|Q9ZDZ7|RATA_RICPR | Ribosome association toxin RatA OS=Rickettsia prowazekii (strain Madrid E) GN=ratA PE=3 SV=1 | 47 | 205 | 9.0E-11 |
sp|Q3THF9|CQ10B_MOUSE | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Mus musculus GN=Coq10b PE=1 SV=1 | 21 | 210 | 1.0E-10 |
sp|Q5I0I9|CQ10B_RAT | Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Rattus norvegicus GN=Coq10b PE=2 SV=2 | 6 | 210 | 2.0E-10 |
sp|P0C6Q0|RATA_VIBCH | Ribosome association toxin RatA OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ratA PE=3 SV=1 | 47 | 206 | 1.0E-07 |
sp|A5F376|RATA_VIBC3 | Ribosome association toxin RatA OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) GN=ratA PE=3 SV=2 | 47 | 206 | 1.0E-07 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.1135 | 0.0954 | 0.0455 | 0.1226 | 0.933 | 0.0469 | 0.08 | 0.0544 | 0.1048 | 0.0108 |
Orthofinder run ID | 4 |
Orthogroup | 5001 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|2381 MAFRLTASPWRHCCTRARPAPHAIARRAFFNLPGSTGGGGGSGGEAQHLAATRTLPYAHGALYELIADVESYERF VPYCSRSRVTEWSPPDARGRRWPALADLHVGWGGFSDVFTSRLRCVPGVSVEAVSGGESAAPSAVFKTLITRWSV RPGASDQPSSPSTEVRLTIDYRFANPVYAAVSAAVSDKVAGLMVEAFEKRARDILGPSSSRS* |
Coding | >Hirsu2|2381 ATGGCTTTTCGACTCACCGCTTCTCCGTGGCGGCACTGCTGTACGCGAGCCCGCCCGGCTCCCCACGCGATCGCC CGCCGTGCCTTCTTCAACCTCCCCGGCAGCACCGGCGGCGGTGGCGGCAGCGGCGGCGAAGCCCAGCACCTCGCC GCGACGCGCACGCTGCCCTACGCGCACGGGGCTCTCTACGAGCTCATCGCCGACGTCGAGTCGTATGAGCGCTTC GTCCCCTACTGCTCCCGCTCCCGTGTCACCGAGTGGTCGCCTCCGGACGCCCGAGGCCGGCGCTGGCCGGCGCTG GCCGACCTGCATGTCGGCTGGGGCGGCTTCAGCGACGTCTTTACCAGCCGCCTACGGTGCGTGCCGGGGGTGTCC GTCGAGGCCGTCAGTGGCGGCGAGTCGGCCGCTCCATCTGCCGTCTTCAAGACGCTCATCACGCGCTGGTCGGTG AGGCCCGGCGCCTCCGACCAGCCATCGTCGCCCTCGACCGAGGTCCGTCTCACCATCGATTACCGGTTCGCCAAC CCCGTCTACGCCGCTGTTAGCGCCGCCGTCTCCGATAAGGTTGCTGGCCTCATGGTCGAAGCCTTCGAAAAACGA GCTCGAGACATACTGGGACCATCAAGCAGCAGGTCGTGA |
Transcript | >Hirsu2|2381 ATGGCTTTTCGACTCACCGCTTCTCCGTGGCGGCACTGCTGTACGCGAGCCCGCCCGGCTCCCCACGCGATCGCC CGCCGTGCCTTCTTCAACCTCCCCGGCAGCACCGGCGGCGGTGGCGGCAGCGGCGGCGAAGCCCAGCACCTCGCC GCGACGCGCACGCTGCCCTACGCGCACGGGGCTCTCTACGAGCTCATCGCCGACGTCGAGTCGTATGAGCGCTTC GTCCCCTACTGCTCCCGCTCCCGTGTCACCGAGTGGTCGCCTCCGGACGCCCGAGGCCGGCGCTGGCCGGCGCTG GCCGACCTGCATGTCGGCTGGGGCGGCTTCAGCGACGTCTTTACCAGCCGCCTACGGTGCGTGCCGGGGGTGTCC GTCGAGGCCGTCAGTGGCGGCGAGTCGGCCGCTCCATCTGCCGTCTTCAAGACGCTCATCACGCGCTGGTCGGTG AGGCCCGGCGCCTCCGACCAGCCATCGTCGCCCTCGACCGAGGTCCGTCTCACCATCGATTACCGGTTCGCCAAC CCCGTCTACGCCGCTGTTAGCGCCGCCGTCTCCGATAAGGTTGCTGGCCTCATGGTCGAAGCCTTCGAAAAACGA GCTCGAGACATACTGGGACCATCAAGCAGCAGGTCGTGA |
Gene | >Hirsu2|2381 ATGGCTTTTCGACTCACCGCTTCTCCGTGGCGGCACTGCTGTACGCGAGCCCGCCCGGCTCCCCACGCGATCGCC CGCCGTGCCTTCTTCAACCTCCCCGGCAGCACCGGCGGCGGTGGCGGCAGCGGCGGCGAAGCCCAGCACCTCGCC GCGACGCGCACGCTGCCCTACGCGCACGGGGCTCTCTACGAGCTCATCGCCGACGTCGAGTCGTATGAGCGCTTC GTCCCCTACTGCTCCCGCTCCCGTGTCACCGAGTGGTCGCCTCCGGACGCCCGAGGCCGGCGCTGGCCGGCGCTG GCCGACCTGCATGTCGGCTGGGGCGGCTTCAGCGACGTCTTTACCAGCCGCCTACGGTGCGTGCCGGGGGTGTCC GTCGAGGCCGTCAGTGGCGGCGAGTCGGCCGCTCCATCTGCCGTCTTCAAGACGCTCATCACGCGCTGGTCGGTG AGGCCCGGCGCCTCCGACCAGCCATCGTCGCCCTCGACCGAGGTCCGTCTCACCATCGATTACCGGTTCGCCAAC CCCGTCTACGCCGCTGTTAGCGCCGCCGTCTCCGATAAGGTTGCTGGCCTCATGGTCGAAGCCTTCGAAAAACGA GCTCGAGACATACTGGGACCATCAAGCAGCAGGTCGTGA |